Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00547 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.2e-70 270.0 165 100.0
SalBow6G1158 Salvia bowleyana HOM05D002025 ORTHO05D001991 4.3e-28 128.6 169 63.3
MSTRG.21001 Avicennia marina HOM05D002025 ORTHO05D001991 1.1e-26 124.0 159 57.9
Migut.D02459 Erythranthe guttata HOM05D002025 ORTHO05D001991 7.6e-25 117.9 115 71.3
MSTRG.17669 Avicennia marina HOM05D002025 ORTHO05D001991 5.1e-21 105.1 155 48.4
Oeu058188.1 Olea europaea HOM05D002025 ORTHO05D001991 1.3e-19 100.5 167 53.9
Migut.N02433 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.4e-18 97.1 160 45.0
Oeu026356.1 Olea europaea HOM05D002025 ORTHO05D001991 1.3e-16 90.5 103 47.6
Nitab4.5_0002183g0040 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.4e-15 87.0 123 52.0
Sopen06g030250 Solanum pennellii HOM05D002025 ORTHO05D001991 9.3e-15 84.3 124 46.8
Solyc06g073850.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 2.7e-14 82.8 124 46.8
PGSC0003DMG400005908 Solanum tuberosum HOM05D002025 ORTHO05D001991 6.0e-14 81.6 124 46.8
SalBow3G3909 Salvia bowleyana HOM05D002025 ORTHO05D001991 1.0e-13 80.9 160 36.9
unitig_21.g20392 Utricularia gibba HOM05D002025 ORTHO05D001991 3.9e-13 79.0 160 33.8
Peaxi162Scf00098g00155 Petunia axillaris HOM05D002025 ORTHO05D001991 2.5e-12 76.3 125 37.6
Nitab4.5_0000875g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 3.3e-12 75.9 119 52.1
Oeu048818.1 Olea europaea HOM05D002025 ORTHO05D001991 4.3e-12 75.5 184 38.0
Duzib170G0914 Durio zibethinus HOM05D002025 ORTHO05D001991 7.4e-12 74.7 154 31.8
Thecc.09G268500 Theobroma cacao HOM05D002025 ORTHO05D001991 9.6e-12 74.3 149 35.6
Duzib168G1208 Durio zibethinus HOM05D002025 ORTHO05D001991 3.7e-11 72.4 141 36.9
Nitab4.5_0002426g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 6.2e-11 71.6 136 44.9
Nitab4.5_0000835g0060 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.8e-10 70.1 153 37.3
Cpa.g.sc5.177 Carica papaya HOM05D002025 ORTHO05D001991 3.1e-10 69.3 147 39.5
Dinv18867 Davidia involucrata HOM05D002025 ORTHO05D001991 3.1e-10 69.3 145 53.1
Cc06_g06920 Coffea canephora HOM05D002025 ORTHO05D001991 6.9e-10 68.2 151 31.1
Nitab4.5_0003557g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 6.9e-10 68.2 154 33.8
Nitab4.5_0006895g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 6.9e-10 68.2 128 53.1
Peaxi162Scf00203g00052 Petunia axillaris HOM05D002025 ORTHO05D001991 6.9e-10 68.2 164 30.5
Peaxi162Scf00345g00619 Petunia axillaris HOM05D002025 ORTHO05D001991 9.0e-10 67.8 142 38.0
Migut.J00733 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.2e-09 67.4 150 32.7
CsaV3_4G023240 Cucumis sativus L. HOM05D004133 ORTHO05D004683 2.6e-09 66.2 159 34.0
Duzib150G1621 Durio zibethinus HOM05D002025 ORTHO05D001991 2.6e-09 66.2 152 32.2
Lalb_Chr01g0017741 Lupinus albus HOM05D002025 ORTHO05D001991 2.6e-09 66.2 165 28.5
Oeu045022.1 Olea europaea HOM05D002025 ORTHO05D001991 2.6e-09 66.2 164 31.1
Haze_23603 Corylus avellana HOM05D002025 ORTHO05D001991 3.4e-09 65.9 156 34.6
ClCG02G024100 Citrullus lanatus HOM05D002025 ORTHO05D001991 4.5e-09 65.5 156 32.1
Cfa010216 Carpinus fangiana HOM05D002025 ORTHO05D001991 5.8e-09 65.1 159 35.2
TWI31G1059 Tripterygium wilfordii HOM05D002025 ORTHO05D001991 5.8e-09 65.1 160 41.2
CANSAT54G0233 Cannabis sativa HOM05D002025 ORTHO05D001991 7.6e-09 64.7 151 33.8
Nn2g12506 Nelumbo nucifera HOM05D002025 ORTHO05D001991 7.6e-09 64.7 116 35.3
Nn2g12507 Nelumbo nucifera HOM05D002025 ORTHO05D001991 7.6e-09 64.7 116 35.3
Sopen01g004740 Solanum pennellii HOM05D002025 ORTHO05D001991 1.7e-08 63.5 160 30.0
SGA_v2.0_scaffold392G50686 Striga asiatica HOM05D002025 ORTHO05D001991 1.7e-08 63.5 144 47.9
COL.COLO4_29503 Corchorus olitorius HOM05D002025 ORTHO05D001991 2.2e-08 63.2 176 29.5
Medtr7g106820 Medicago truncatula HOM05D002025 ORTHO05D001991 2.2e-08 63.2 179 30.2
Sopen01g002770 Solanum pennellii HOM05D002025 ORTHO05D001991 2.2e-08 63.2 153 34.6
PGSC0003DMG400013131 Solanum tuberosum HOM05D002025 ORTHO05D001991 2.2e-08 63.2 166 31.9
PGSC0003DMG400021375 Solanum tuberosum HOM05D002025 ORTHO05D001991 2.2e-08 63.2 153 37.3
MELO3C014692.2 Cucumis melo HOM05D002025 ORTHO05D001991 3.8e-08 62.4 146 31.5
Oeu058126.1 Olea europaea HOM05D002025 ORTHO05D001991 3.8e-08 62.4 153 28.1
RcHm_v2.0_Chr5g0049201 Rosa chinensis HOM05D002025 ORTHO05D001991 3.8e-08 62.4 122 40.2
Solyc01g009250.3 Solanum lycopersicum HOM05D002025 ORTHO05D001991 3.8e-08 62.4 166 30.1
Actinidia03858 Actinidia chinensis HOM05D002025 ORTHO05D001991 4.9e-08 62.0 149 34.9
Actinidia03966 Actinidia chinensis HOM05D002025 ORTHO05D001991 6.5e-08 61.6 148 35.1
ECA238G4628 Erigeron canadensis HOM05D002025 ORTHO05D001991 8.4e-08 61.2 126 32.5
FvH4_6g20920 Fragaria vesca HOM05D002025 ORTHO05D001991 8.4e-08 61.2 122 30.3
FAN02G0183 Fragaria x ananassa HOM05D002025 ORTHO05D001991 8.4e-08 61.2 122 30.3
FAN14G3941 Fragaria x ananassa HOM05D002025 ORTHO05D001991 8.4e-08 61.2 122 30.3
Glyma.19G201900 Glycine max HOM05D002025 ORTHO05D001991 8.4e-08 61.2 167 29.9
Lalb_Chr20g0111231 Lupinus albus HOM05D002025 ORTHO05D001991 1.1e-07 60.8 160 27.5
Oeu020161.1 Olea europaea HOM05D002025 ORTHO05D001991 1.1e-07 60.8 124 31.5
Rhsim01G0198700 Rhododendron simsii HOM05D002025 ORTHO05D001991 1.1e-07 60.8 151 51.0
COL.COLO4_25368 Corchorus olitorius HOM05D002025 ORTHO05D001991 1.4e-07 60.5 149 30.2
FAN05G4348 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.4e-07 60.5 122 29.5
FAN05G4575 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.4e-07 60.5 122 29.5
HanXRQChr14g0453261 Helianthus annuus HOM05D002025 ORTHO05D001991 1.4e-07 60.5 111 30.6
Nn4g24817 Nelumbo nucifera HOM05D002025 ORTHO05D001991 1.4e-07 60.5 119 35.3
Oeu035663.1 Olea europaea HOM05D002025 ORTHO05D001991 1.4e-07 60.5 152 29.6
TAR369G1029 Trochodendron aralioides HOM05D002025 ORTHO05D001991 1.4e-07 60.5 163 30.7
Duzib106G0588 Durio zibethinus HOM05D002025 ORTHO05D001991 1.9e-07 60.1 162 27.8
FAN09G2632 Fragaria x ananassa HOM05D002025 ORTHO05D001991 1.9e-07 60.1 122 29.5
Gorai.002G153700 Gossypium raimondii HOM05D002025 ORTHO05D001991 1.9e-07 60.1 159 29.6
Gorai.009G081700 Gossypium raimondii HOM05D002025 ORTHO05D001991 1.9e-07 60.1 160 30.0
Aqoxy1G00592 Aquilegia oxysepala HOM05D002025 ORTHO05D001991 2.5e-07 59.7 100 33.0
Duzib093G1955 Durio zibethinus HOM05D002025 ORTHO05D001991 2.5e-07 59.7 170 28.8
Duzib128G1567 Durio zibethinus HOM05D002025 ORTHO05D001991 2.5e-07 59.7 168 27.4
Thhalv10021370m.g Eutrema salsugineum HOM05D002025 ORTHO05D001991 2.5e-07 59.7 187 27.8
Nn8g39322 Nelumbo nucifera HOM05D002025 ORTHO05D001991 2.5e-07 59.7 113 33.6
Prupe.6G148600 Prunus persica HOM05D002025 ORTHO05D001991 2.5e-07 59.7 127 38.6
Ciclev10029482m.g Citrus clementina HOM05D002025 ORTHO05D001991 3.2e-07 59.3 161 32.3
Gohir.A01G135600 Gossypium hirsutum HOM05D002025 ORTHO05D001991 3.2e-07 59.3 165 29.1
Gohir.D05G080100 Gossypium hirsutum HOM05D002025 ORTHO05D001991 3.2e-07 59.3 160 29.4
PSO478G4470 Papaver somniferum HOM05D002025 ORTHO05D001991 4.2e-07 58.9 121 38.0
TAR623G1549 Trochodendron aralioides HOM05D002025 ORTHO05D001991 4.2e-07 58.9 158 29.1
Cpa.g.sc103.48 Carica papaya HOM05D002025 ORTHO05D001991 5.5e-07 58.5 109 36.7
Peaxi162Scf00717g00001 Petunia axillaris HOM05D002025 ORTHO05D001991 5.5e-07 58.5 154 42.9
PGSC0003DMG400002991 Solanum tuberosum HOM05D002025 ORTHO05D001991 5.5e-07 58.5 166 42.2
Gohir.A05G077300 Gossypium hirsutum HOM05D002025 ORTHO05D001991 7.1e-07 58.2 153 30.7
QL01p018970 Quercus lobata HOM05D002025 ORTHO05D001991 7.1e-07 58.2 145 32.4
CSS0022343 Camellia sinensis var. sinensis HOM05D002025 ORTHO05D001991 9.3e-07 57.8 129 30.2
SGA_v2.0_scaffold112G31684 Striga asiatica HOM05D002025 ORTHO05D001991 9.3e-07 57.8 159 31.4
Gohir.A04G058400 Gossypium hirsutum HOM05D002025 ORTHO05D001991 1.2e-06 57.4 149 28.9
Lsat_1_v5_gn_2_101961 Lactuca sativa HOM05D002025 ORTHO05D001991 1.2e-06 57.4 136 30.9
Lalb_Chr19g0136101 Lupinus albus HOM05D002025 ORTHO05D001991 1.2e-06 57.4 121 32.2
Sed0018421 Sechium edule HOM05D002025 ORTHO05D001991 1.2e-06 57.4 150 34.7
Haze_20117 Corylus avellana HOM05D002025 ORTHO05D001991 1.6e-06 57.0 151 29.1
HanXRQChr01g0026141 Helianthus annuus HOM05D002025 ORTHO05D001991 1.6e-06 57.0 165 30.3
Prupe.7G090300 Prunus persica HOM05D002025 ORTHO05D001991 1.6e-06 57.0 121 31.4
arahy.Tifrunner.gnm1.ann1.P25GE7 Arachis hypogaea HOM05D002025 ORTHO05D001991 2.1e-06 56.6 129 30.2
Lsat_1_v5_gn_1_56861 Lactuca sativa HOM05D002025 ORTHO05D001991 2.1e-06 56.6 156 32.7
MSTRG.5912 Avicennia marina HOM05D002025 ORTHO05D001991 2.7e-06 56.2 130 29.2
Eucgr.K01912 Eucalyptus grandis HOM05D002025 ORTHO05D001991 2.7e-06 56.2 160 32.5
FAN21G1873 Fragaria x ananassa HOM05D002025 ORTHO05D001991 2.7e-06 56.2 136 38.2
Sabra16G0067700 Salix brachista HOM05D002025 ORTHO05D001991 2.7e-06 56.2 157 27.4
Migut.L01846 Erythranthe guttata HOM05D002025 ORTHO05D001991 3.5e-06 55.8 162 29.6
HanXRQChr07g0196581 Helianthus annuus HOM05D002025 ORTHO05D001991 3.5e-06 55.8 122 32.0
Lalb_Chr25g0287861 Lupinus albus HOM05D002025 ORTHO05D001991 3.5e-06 55.8 165 27.3
Potri.006G200100 Populus trichocarpa HOM05D002025 ORTHO05D001991 3.5e-06 55.8 151 29.1
PGR142G1790 Punica granatum HOM05D002025 ORTHO05D001991 3.5e-06 55.8 160 29.4
Thecc.05G109600 Theobroma cacao HOM05D002025 ORTHO05D001991 3.5e-06 55.8 130 29.2
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 4.6e-06 55.5 136 29.4
CARHR086240 Cardamine hirsuta HOM05D002025 ORTHO05D001991 4.6e-06 55.5 179 26.8
Cfa020076 Carpinus fangiana HOM05D002025 ORTHO05D001991 4.6e-06 55.5 158 29.7
DCAR_012256 Daucus carota HOM05D002025 ORTHO05D001991 4.6e-06 55.5 120 30.8
Gohir.D01G122800 Gossypium hirsutum HOM05D002025 ORTHO05D001991 4.6e-06 55.5 159 28.9
Lj7A139T11 Lonicera japonica HOM05D002025 ORTHO05D001991 4.6e-06 55.5 150 30.7
Lj5g0013690 Lotus japonicus HOM05D002025 ORTHO05D001991 4.6e-06 55.5 176 30.7
MD12G1045100 Malus domestica HOM05D002025 ORTHO05D001991 4.6e-06 55.5 148 30.4
Phvul.001G198100 Phaseolus vulgaris HOM05D002025 ORTHO05D001991 4.6e-06 55.5 157 28.7
Psat3g027400 Pisum sativum HOM05D002025 ORTHO05D001991 4.6e-06 55.5 168 27.4
Potri.016G066300 Populus trichocarpa HOM05D002025 ORTHO05D001991 4.6e-06 55.5 159 31.4
PGSC0003DMG400028135 Solanum tuberosum HOM05D002025 ORTHO05D001991 4.6e-06 55.5 108 31.5
THA.LOC104816625 Tarenaya hassleriana HOM05D002025 ORTHO05D001991 4.6e-06 55.5 195 27.2
HPP92_026333 Vanilla planifolia HOM05D002025 ORTHO05D001991 4.6e-06 55.5 137 38.0
AL172U10020 Arabidopsis lyrata HOM05D002025 ORTHO05D001991 6.0e-06 55.1 121 29.8
AL4G20930 Arabidopsis lyrata HOM05D002025 ORTHO05D001991 6.0e-06 55.1 121 29.8
CiPaw.13G126200 Carya illinoinensis HOM05D002025 ORTHO05D001991 6.0e-06 55.1 143 33.6
Lj7A141T17 Lonicera japonica HOM05D002025 ORTHO05D001991 6.0e-06 55.1 150 30.7
Sabra04G0127800 Salix brachista HOM05D001265 ORTHO05D001241 6.0e-06 55.1 129 32.6
Sabra06G0153900 Salix brachista HOM05D002025 ORTHO05D001991 6.0e-06 55.1 104 30.8
Solyc10g081700.3 Solanum lycopersicum HOM05D002025 ORTHO05D001991 6.0e-06 55.1 103 33.0
Sopen10g032210 Solanum pennellii HOM05D002025 ORTHO05D001991 6.0e-06 55.1 103 33.0
AL3G23250 Arabidopsis lyrata HOM05D002025 ORTHO05D001991 7.9e-06 54.7 174 27.0
BcaB04g21123 Brassica carinata HOM05D002025 ORTHO05D001991 7.9e-06 54.7 203 27.1


User provided reference genes

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