Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00519 Erythranthe guttata HOM05D002529 ORTHO05D002664 3.1e-60 235.0 119 100.0
Migut.L00922 Erythranthe guttata HOM05D002529 ORTHO05D002664 5.1e-47 191.0 103 92.2
Migut.G00316 Erythranthe guttata HOM05D002529 ORTHO05D002664 4.5e-35 151.4 130 66.2
Oeu006310.1 Olea europaea HOM05D002529 ORTHO05D002664 9.7e-22 107.1 132 49.2
Migut.L01786 Erythranthe guttata HOM05D002529 ORTHO05D002664 4.8e-21 104.8 130 50.8
SalBow3G3572 Salvia bowleyana HOM05D002529 ORTHO05D002664 5.3e-20 101.3 120 46.7
MSTRG.5850 Avicennia marina HOM05D002529 ORTHO05D002664 6.9e-20 100.9 122 49.2
SGA_v2.0_scaffold31G12908 Striga asiatica HOM05D002529 ORTHO05D002664 1.2e-19 100.1 127 49.6
Migut.J01026 Erythranthe guttata HOM05D002529 ORTHO05D002664 2.0e-19 99.4 130 46.9
Oeu026809.1 Olea europaea HOM05D002529 ORTHO05D002664 2.9e-18 95.5 118 47.5
Oeu021565.1 Olea europaea HOM05D002529 ORTHO05D002664 4.2e-17 91.7 132 44.7
unitig_578.g16363 Utricularia gibba HOM05D000550 ORTHO05D000400 4.2e-17 91.7 119 47.9
PGSC0003DMG400027508 Solanum tuberosum HOM05D002529 ORTHO05D002664 3.6e-16 88.6 134 43.3
Peaxi162Scf00220g00009 Petunia axillaris HOM05D002529 ORTHO05D002664 7.9e-16 87.4 120 45.8
SalBow5G1920 Salvia bowleyana HOM05D002529 ORTHO05D002664 1.0e-15 87.0 151 37.1
Nitab4.5_0002687g0060 Nicotiana tabacum HOM05D002529 ORTHO05D002664 1.4e-15 86.7 116 45.7
CAN.G134.40 Capsicum annuum HOM05D002529 ORTHO05D002664 3.0e-15 85.5 133 41.4
Solyc01g096760.3 Solanum lycopersicum HOM05D002529 ORTHO05D002664 3.0e-15 85.5 134 41.8
Sopen01g040470 Solanum pennellii HOM05D002529 ORTHO05D002664 3.0e-15 85.5 134 41.8
SalBow5G5584 Salvia bowleyana HOM05D002529 ORTHO05D002664 5.1e-15 84.7 151 36.4
vmacro19828 Vaccinium macrocarpon HOM05D002529 ORTHO05D002664 6.7e-15 84.3 127 40.9
DCAR_018312 Daucus carota HOM05D002529 ORTHO05D002664 1.5e-14 83.2 117 39.3
CSS0013639 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 2.0e-14 82.8 114 45.6
Hma1.2p1_0083F.1_g042670 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 2.0e-14 82.8 121 43.0
Dinv02599 Davidia involucrata HOM05D002529 ORTHO05D002664 3.3e-14 82.0 124 42.7
Rhsim05G0150200 Rhododendron simsii HOM05D002529 ORTHO05D002664 3.3e-14 82.0 110 42.7
Dinv05119 Davidia involucrata HOM05D002529 ORTHO05D002664 4.3e-14 81.6 109 45.9
Nitab4.5_0004903g0030 Nicotiana tabacum HOM05D002529 ORTHO05D002664 4.3e-14 81.6 114 44.7
MSTRG.26637 Avicennia marina HOM05D002529 ORTHO05D002664 8.2e-13 77.4 59 62.7
Cc06_g23700 Coffea canephora HOM05D002529 ORTHO05D002664 1.2e-11 73.6 120 41.7
HanXRQChr07g0200741 Helianthus annuus HOM05D002529 ORTHO05D002664 1.2e-11 73.6 109 39.4
Peaxi162Scf00220g00008 Petunia axillaris HOM05D002529 ORTHO05D002664 1.5e-11 73.2 120 40.0
ECA238G0509 Erigeron canadensis HOM05D002529 ORTHO05D002664 2.6e-11 72.4 113 39.8
Lsat_1_v5_gn_1_56180 Lactuca sativa HOM05D002529 ORTHO05D002664 7.7e-11 70.9 128 35.9
Lsat_1_v5_gn_2_115920 Lactuca sativa HOM05D002529 ORTHO05D002664 1.0e-10 70.5 122 35.2
Nitab4.5_0003586g0050 Nicotiana tabacum HOM05D002529 ORTHO05D002664 1.7e-10 69.7 75 50.7
RcHm_v2.0_Chr5g0076411 Rosa chinensis HOM05D002529 ORTHO05D002664 2.2e-10 69.3 122 36.1
Dinv02597 Davidia involucrata HOM05D002529 ORTHO05D002664 2.9e-10 68.9 60 60.0
Potri.005G047901 Populus trichocarpa HOM05D002529 ORTHO05D002664 2.9e-10 68.9 108 39.8
RcHm_v2.0_Chr1g0334081 Rosa chinensis HOM05D002529 ORTHO05D002664 2.9e-10 68.9 124 35.5
ClCG05G009860 Citrullus lanatus HOM05D002529 ORTHO05D002664 3.8e-10 68.6 109 40.4
ECA236G0123 Erigeron canadensis HOM05D002529 ORTHO05D002664 5.0e-10 68.2 114 43.0
Hund06996 Selenicereus undatus HOM05D002529 ORTHO05D002664 5.0e-10 68.2 122 33.6
Prupe.6G025700 Prunus persica HOM05D002529 ORTHO05D002664 8.5e-10 67.4 124 37.1
Thecc.05G290400 Theobroma cacao HOM05D002529 ORTHO05D002664 8.5e-10 67.4 116 36.2
Potri.013G035000 Populus trichocarpa HOM05D002529 ORTHO05D002664 1.4e-09 66.6 108 36.1
CiPaw.07G007900 Carya illinoinensis HOM05D002529 ORTHO05D002664 1.9e-09 66.2 135 37.0
Eucgr.H04397 Eucalyptus grandis HOM05D002529 ORTHO05D002664 2.5e-09 65.9 115 34.8
Ciclev10002511m.g Citrus clementina HOM05D002529 ORTHO05D002664 3.2e-09 65.5 143 35.7
Hma1.2p1_0654F.1_g196630 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 3.2e-09 65.5 99 42.4
Manes.08G120700 Manihot esculenta HOM05D002529 ORTHO05D002664 3.2e-09 65.5 114 37.7
Duzib128G1976 Durio zibethinus HOM05D002529 ORTHO05D002664 4.2e-09 65.1 115 37.4
MD03G1029600 Malus domestica HOM05D002529 ORTHO05D002664 4.2e-09 65.1 124 36.3
MD04G1217800 Malus domestica HOM05D002529 ORTHO05D002664 4.2e-09 65.1 121 37.2
Prupe.6G337800 Prunus persica HOM05D002529 ORTHO05D002664 4.2e-09 65.1 120 36.7
TWI12G0397 Tripterygium wilfordii HOM05D002529 ORTHO05D002664 4.2e-09 65.1 122 33.6
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 5.5e-09 64.7 129 34.9
Glyma.13G169100 Glycine max HOM05D002529 ORTHO05D002664 5.5e-09 64.7 95 44.2
Glyma.19G009300 Glycine max HOM05D002529 ORTHO05D002664 5.5e-09 64.7 120 36.7
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 5.5e-09 64.7 108 37.0
ClCG11G014280 Citrullus lanatus HOM05D002529 ORTHO05D002664 7.2e-09 64.3 109 39.4
CsaV3_3G047670 Cucumis sativus L. HOM05D002529 ORTHO05D002664 7.2e-09 64.3 109 37.6
ECA236G2527 Erigeron canadensis HOM05D002529 ORTHO05D002664 7.2e-09 64.3 115 37.4
QL08p059718 Quercus lobata HOM05D002529 ORTHO05D002664 7.2e-09 64.3 135 35.6
CiPaw.08G178400 Carya illinoinensis HOM05D002529 ORTHO05D002664 1.2e-08 63.5 124 35.5
FvH4_5g30310 Fragaria vesca HOM05D002529 ORTHO05D002664 1.2e-08 63.5 121 34.7
HanXRQChr14g0457681 Helianthus annuus HOM05D002529 ORTHO05D002664 1.2e-08 63.5 61 50.8
Cpa.g.sc114.63 Carica papaya HOM05D002529 ORTHO05D002664 1.6e-08 63.2 118 33.1
TWI12G0415 Tripterygium wilfordii HOM05D000460 ORTHO05D000333 1.6e-08 63.2 119 33.6
VMungo0251G2818 Vigna mungo HOM05D002529 ORTHO05D002664 2.1e-08 62.8 114 36.0
FAN08G0687 Fragaria x ananassa HOM05D002529 ORTHO05D002664 2.7e-08 62.4 122 34.4
arahy.Tifrunner.gnm1.ann1.2T97DK Arachis hypogaea HOM05D002529 ORTHO05D002664 3.6e-08 62.0 115 35.7
arahy.Tifrunner.gnm1.ann1.A0H8UL Arachis hypogaea HOM05D002529 ORTHO05D002664 3.6e-08 62.0 115 35.7
arahy.Tifrunner.gnm1.ann1.DGU1VQ Arachis hypogaea HOM05D002529 ORTHO05D002664 3.6e-08 62.0 115 35.7
arahy.Tifrunner.gnm1.ann1.EKEG73 Arachis hypogaea HOM05D002529 ORTHO05D002664 3.6e-08 62.0 115 35.7
Gohir.D11G313300 Gossypium hirsutum HOM05D002529 ORTHO05D002664 3.6e-08 62.0 119 32.8
Nn5g28120 Nelumbo nucifera HOM05D002529 ORTHO05D002664 3.6e-08 62.0 110 35.5
Sc09g0003730 Simmondsia chinensis HOM05D002529 ORTHO05D002664 3.6e-08 62.0 131 33.6
GSVIVG01021882001 Vitis vinifera HOM05D002529 ORTHO05D002664 3.6e-08 62.0 122 34.4
CANSAT54G0996 Cannabis sativa HOM05D002529 ORTHO05D002664 4.7e-08 61.6 74 43.2
FAN13G2107 Fragaria x ananassa HOM05D002529 ORTHO05D002664 4.7e-08 61.6 122 34.4
arahy.Tifrunner.gnm1.ann1.2EE7P6 Arachis hypogaea HOM05D002529 ORTHO05D002664 6.1e-08 61.2 112 36.6
arahy.Tifrunner.gnm1.ann1.418MG4 Arachis hypogaea HOM05D002529 ORTHO05D002664 6.1e-08 61.2 112 36.6
arahy.Tifrunner.gnm1.ann1.G3F6T9 Arachis hypogaea HOM05D002529 ORTHO05D002664 6.1e-08 61.2 112 36.6
Ca_23953_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 6.1e-08 61.2 133 30.1
Ca_23959_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 6.1e-08 61.2 133 30.1
Gorai.007G344500 Gossypium raimondii HOM05D002529 ORTHO05D002664 6.1e-08 61.2 119 32.8
Lalb_Chr04g0264001 Lupinus albus HOM05D002529 ORTHO05D002664 6.1e-08 61.2 86 41.9
Nn1g02343 Nelumbo nucifera HOM05D002529 ORTHO05D002664 6.1e-08 61.2 110 36.4
Lj4g0005583 Lotus japonicus HOM05D002529 ORTHO05D002664 7.9e-08 60.8 116 35.3
Peaxi162Scf00071g00848 Petunia axillaris HOM05D002529 ORTHO05D002664 7.9e-08 60.8 103 42.7
PGR042G2960 Punica granatum HOM05D002529 ORTHO05D002664 7.9e-08 60.8 78 44.9
EL10Ac3g07204 Beta vulgaris HOM05D002529 ORTHO05D002664 1.0e-07 60.5 128 30.5
Sed0025735 Sechium edule HOM05D002529 ORTHO05D002664 1.4e-07 60.1 109 36.7
VMungo1383G2706 Vigna mungo HOM05D002529 ORTHO05D002664 1.4e-07 60.1 120 35.0
MELO3C003557.2 Cucumis melo HOM05D002529 ORTHO05D002664 1.8e-07 59.7 109 35.8
Gohir.A11G298500 Gossypium hirsutum HOM05D002529 ORTHO05D002664 1.8e-07 59.7 119 31.9
Nn6g34079 Nelumbo nucifera HOM05D002529 ORTHO05D002664 1.8e-07 59.7 121 32.2
Glyma.18G147100 Glycine max HOM05D002529 ORTHO05D002664 2.3e-07 59.3 72 47.2
Sed0014372 Sechium edule HOM05D002529 ORTHO05D002664 2.3e-07 59.3 117 32.5
Hma1.2p1_0654F.1_g196660 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 3.9e-07 58.5 87 40.2
AUR62000960 Chenopodium quinoa HOM05D002529 ORTHO05D002664 6.7e-07 57.8 124 32.3
Lj1g0004297 Lotus japonicus HOM05D002529 ORTHO05D002664 6.7e-07 57.8 86 41.9
CARHR185680 Cardamine hirsuta HOM05D002529 ORTHO05D002664 8.8e-07 57.4 140 31.4
Atru.chr2.663 Acer truncatum HOM05D002529 ORTHO05D002664 1.1e-06 57.0 117 33.3
COL.COLO4_15255 Corchorus olitorius HOM05D002529 ORTHO05D002664 1.1e-06 57.0 125 28.8
Psat2g156040 Pisum sativum HOM05D002529 ORTHO05D002664 1.1e-06 57.0 131 29.8
Phvul.003G288900 Phaseolus vulgaris HOM05D002529 ORTHO05D002664 1.5e-06 56.6 102 36.3
Aqoxy2G03402 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 3.3e-06 55.5 82 37.8
FAN18G2811 Fragaria x ananassa HOM05D002529 ORTHO05D002664 3.3e-06 55.5 60 46.7
THA.LOC104821691 Tarenaya hassleriana HOM05D002529 ORTHO05D002664 9.7e-06 53.9 105 32.4


User provided reference genes

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