Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.1e-187 659.8 335 100.0
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 5.0e-108 395.2 345 63.2
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.2e-106 390.6 341 62.5
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 3.6e-106 389.0 342 62.0
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 4.0e-97 359.0 305 59.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 4.0e-97 359.0 292 65.1
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 2.8e-95 352.8 337 57.0
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.8e-95 352.8 334 56.6
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 3.1e-94 349.4 296 61.8
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.1e-94 349.0 325 57.5
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.5e-93 345.9 335 55.2
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.5e-93 345.9 335 55.2
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.3e-92 344.0 285 61.1
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 5.0e-92 342.0 333 55.6
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 6.6e-92 341.7 329 55.6
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 8.6e-92 341.3 335 54.3
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.5e-91 340.5 329 56.2
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 1.9e-91 340.1 334 56.0
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 3.3e-91 339.3 335 55.2
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 9.5e-91 337.8 332 54.2
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.6e-90 337.0 312 55.4
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.1e-90 336.7 231 79.7
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 2.8e-90 336.3 346 53.2
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 3.6e-90 335.9 336 53.9
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 8.0e-90 334.7 312 54.8
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 4.0e-89 332.4 316 56.6
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.5e-88 330.5 331 53.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 1.5e-88 330.5 332 52.1
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 2.0e-88 330.1 318 56.3
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.6e-88 329.7 339 54.3
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 5.7e-88 328.6 295 56.9
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 9.8e-88 327.8 335 53.1
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.7e-87 327.0 335 54.6
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 2.2e-87 326.6 349 53.0
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 2.2e-87 326.6 335 54.3
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.9e-87 326.2 339 52.8
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 2.9e-87 326.2 364 50.3
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 2.4e-86 323.2 333 52.9
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 5.4e-86 322.0 339 54.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 5.4e-86 322.0 340 53.5
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 5.4e-86 322.0 330 53.0
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 9.2e-86 321.2 331 51.7
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.2e-85 320.9 335 52.2
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 1.6e-85 320.5 338 51.8
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.6e-85 320.5 321 54.5
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.0e-85 320.1 294 56.5
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 2.7e-85 319.7 291 58.8
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 5.9e-85 318.5 299 55.5
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.7e-84 317.0 288 58.0
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.7e-84 317.0 299 53.5
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.7e-84 317.0 293 56.0
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 3.0e-84 316.2 329 53.5
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 1.9e-83 313.5 346 51.7
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 3.3e-83 312.8 286 54.9
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 7.3e-83 311.6 337 51.0
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 7.3e-83 311.6 323 52.6
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.2e-82 310.8 328 51.2
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 2.8e-82 309.7 325 52.6
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 3.6e-82 309.3 349 48.7
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 6.2e-82 308.5 322 51.9
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 8.0e-82 308.1 302 55.6
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 1.1e-81 307.8 264 59.1
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 4.0e-81 305.8 343 50.4
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 6.8e-81 305.1 324 53.1
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.2e-80 304.3 322 50.9
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.5e-80 303.9 324 50.3
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 1.5e-80 303.9 332 51.8
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.0e-80 303.5 326 50.6
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 2.6e-80 303.1 323 50.2
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 2.6e-80 303.1 298 51.0
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 3.4e-80 302.8 333 50.8
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 4.4e-80 302.4 296 53.0
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 4.4e-80 302.4 312 53.2
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 5.8e-80 302.0 292 54.8
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 9.8e-80 301.2 298 55.7
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 9.8e-80 301.2 343 49.3
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.3e-79 300.8 333 50.5
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 1.7e-79 300.4 295 55.3
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 3.7e-79 299.3 292 54.1
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 4.9e-79 298.9 332 50.6
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 8.3e-79 298.1 329 52.0
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 5.4e-78 295.4 326 52.8
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.6e-77 293.9 335 50.1
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 5.0e-76 288.9 325 50.2
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 1.9e-75 287.0 304 52.6
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 7.3e-75 285.0 302 48.7
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.6e-74 283.9 269 55.0
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 2.8e-74 283.1 325 48.9
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 3.6e-74 282.7 329 46.8
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 4.7e-74 282.3 350 47.7
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 1.4e-73 280.8 263 55.5
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.7e-71 273.9 390 43.3
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 3.7e-71 272.7 332 46.4
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 2.4e-70 270.0 262 52.3
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.9e-67 260.4 226 59.3
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 1.8e-65 253.8 418 37.8
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 3.8e-63 246.1 310 43.2
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 6.4e-63 245.4 308 44.2
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 1.9e-62 243.8 322 44.4
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 2.4e-62 243.4 264 50.0
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 5.4e-62 242.3 222 56.8
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 9.2e-62 241.5 313 42.8
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 1.3e-60 237.7 182 62.6
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.6e-58 230.7 236 49.6
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 6.2e-58 228.8 280 50.0
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 5.2e-57 225.7 285 44.6
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 9.0e-57 224.9 227 54.2
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 7.1e-54 215.3 249 47.0
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 7.8e-53 211.8 315 40.0
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 7.8e-53 211.8 324 42.9
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 3.0e-52 209.9 270 43.3
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 2.5e-51 206.8 142 69.0
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 7.9e-45 185.3 241 46.9
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.0e-44 184.9 305 37.0
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.3e-44 184.5 315 38.7
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.8e-42 176.0 206 47.6
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 3.4e-40 169.9 255 40.4
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.3e-39 167.9 175 53.1
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 4.2e-38 162.9 285 35.8
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 2.5e-35 153.7 155 55.5
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.2e-32 144.8 170 47.6
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 3.5e-29 133.3 87 70.1
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 2.1e-21 107.5 83 62.7


User provided reference genes

Program Settings