Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00479 Erythranthe guttata HOM05D022792 ORTHO05D001819 3.4e-95 351.7 181 100.0
Migut.I00312 Erythranthe guttata HOM05D022792 ORTHO05D001819 3.0e-91 338.6 181 96.1
Migut.G01351 Erythranthe guttata HOM05D022792 ORTHO05D001819 3.3e-74 282.0 151 96.0
Migut.I00331 Erythranthe guttata HOM05D022792 ORTHO05D001819 2.1e-15 86.7 162 40.7
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 4.7e-12 75.5 137 32.1
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 6.2e-12 75.1 139 30.2
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.1e-11 74.3 150 31.3
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.4e-11 73.9 145 33.1
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 1.8e-11 73.6 152 31.6
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 2.4e-11 73.2 156 34.0
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 1.5e-10 70.5 172 30.2
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 1.5e-10 70.5 144 29.9
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 2.6e-10 69.7 146 33.6
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 4.4e-10 68.9 186 30.6
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 5.8e-10 68.6 113 34.5
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 7.6e-10 68.2 149 30.2
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 9.9e-10 67.8 149 29.5
Psat0s740g0160 Pisum sativum HOM05D001578 ORTHO05D001207 1.3e-09 67.4 147 31.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 1.7e-09 67.0 116 32.8
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 2.2e-09 66.6 146 27.4
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 2.9e-09 66.2 139 30.2
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 4.9e-09 65.5 133 30.8
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 4.9e-09 65.5 133 31.6
Eucgr.D01180 Eucalyptus grandis HOM05D001445 ORTHO05D001261 6.4e-09 65.1 166 28.3
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 6.4e-09 65.1 147 29.3
Nitab4.5_0000360g0070 Nicotiana tabacum HOM05D011410 ORTHO05D013015 6.4e-09 65.1 104 41.3
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 8.4e-09 64.7 162 34.0
Aqoxy3G03791 Aquilegia oxysepala HOM05D023066 ORTHO05D001819 1.1e-08 64.3 142 30.3
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 1.1e-08 64.3 180 30.0
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 1.1e-08 64.3 181 29.3
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.4e-08 63.9 158 31.6
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 1.4e-08 63.9 149 32.2
Migut.I00087 Erythranthe guttata HOM05D062370 ORTHO05D001819 1.9e-08 63.5 102 39.2
Eucgr.D01181 Eucalyptus grandis HOM05D001445 ORTHO05D001261 1.9e-08 63.5 166 28.3
MBI18_g25089_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 1.9e-08 63.5 175 29.7
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.9e-08 63.5 130 30.8
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 1.9e-08 63.5 146 29.5
Os04g0587200 Oryza sativa ssp. japonica HOM05D015189 ORTHO05D018061 2.4e-08 63.2 180 29.4
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 3.2e-08 62.8 132 31.1
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 3.2e-08 62.8 146 30.1
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 4.2e-08 62.4 139 32.4
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 7.1e-08 61.6 178 28.7
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 7.1e-08 61.6 159 27.7
Eucgr.L02459 Eucalyptus grandis HOM05D001445 ORTHO05D001261 7.1e-08 61.6 166 28.3
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 7.1e-08 61.6 163 28.2
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 7.1e-08 61.6 100 35.0
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 9.3e-08 61.2 169 29.6
PSO144G0022 Papaver somniferum HOM05D023066 ORTHO05D037272 9.3e-08 61.2 143 28.7
RcHm_v2.0_Chr3g0486661 Rosa chinensis HOM05D008191 ORTHO05D010044 9.3e-08 61.2 172 30.2
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 1.2e-07 60.8 145 32.4
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 1.2e-07 60.8 134 31.3
Lsat_1_v5_gn_6_117520 Lactuca sativa HOM05D058011 ORTHO05D001819 1.2e-07 60.8 148 28.4
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.2e-07 60.8 175 26.3
Medtr4g122750 Medicago truncatula HOM05D001578 ORTHO05D001207 1.6e-07 60.5 163 28.8
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.1e-07 60.1 154 29.2
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.7e-07 59.7 158 31.0
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 2.7e-07 59.7 158 31.0
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 3.5e-07 59.3 153 29.4
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 3.5e-07 59.3 165 28.5
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.5e-07 59.3 150 31.3
MBI18_g25092_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D005233 3.5e-07 59.3 168 27.4
PGR031G2424 Punica granatum HOM05D001578 ORTHO05D001207 3.5e-07 59.3 160 29.4
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 3.5e-07 59.3 170 31.2
Thecc.03G235400 Theobroma cacao HOM05D001445 ORTHO05D001261 3.5e-07 59.3 163 29.4
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 4.6e-07 58.9 148 29.7
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 4.6e-07 58.9 158 30.4
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 4.6e-07 58.9 157 26.8
QL07p004956 Quercus lobata HOM05D011459 ORTHO05D013640 4.6e-07 58.9 157 28.7
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 4.6e-07 58.9 171 28.7
Ciclev10032808m.g Citrus clementina HOM05D001445 ORTHO05D001261 6.0e-07 58.5 155 31.6
Manes.15G171900 Manihot esculenta HOM05D001445 ORTHO05D001261 6.0e-07 58.5 168 28.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 7.8e-07 58.2 140 27.1
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 7.8e-07 58.2 183 31.7
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 7.8e-07 58.2 142 33.8
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 7.8e-07 58.2 158 27.8
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 7.8e-07 58.2 123 33.3
MBI19_g19941_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 1.0e-06 57.8 171 26.3
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 1.0e-06 57.8 146 28.8
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 1.3e-06 57.4 137 29.2
Dinv22852 Davidia involucrata HOM05D009438 ORTHO05D010870 1.3e-06 57.4 137 29.2
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 1.3e-06 57.4 137 29.2
MBI19_g19942_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 1.3e-06 57.4 171 26.3
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.3e-06 57.4 162 27.2
PGSC0003DMG400039425 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.3e-06 57.4 151 31.1
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.7e-06 57.0 87 37.9
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-06 57.0 133 34.6
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-06 57.0 133 34.6
Dinv22850 Davidia involucrata HOM05D009438 ORTHO05D010870 2.3e-06 56.6 137 29.2
Rhsim13G0008900 Rhododendron simsii HOM05D003556 ORTHO05D003404 2.3e-06 56.6 96 37.5
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 3.0e-06 56.2 161 28.0
Eucgr.D01179 Eucalyptus grandis HOM05D001445 ORTHO05D001261 3.0e-06 56.2 173 27.7
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 3.0e-06 56.2 108 33.3
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 3.0e-06 56.2 143 29.4
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 3.0e-06 56.2 170 25.9
Oeu063123.1 Olea europaea HOM05D009438 ORTHO05D010870 3.0e-06 56.2 154 26.6
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 3.0e-06 56.2 134 29.9
Sc22g0001310 Simmondsia chinensis HOM05D001445 ORTHO05D001261 3.0e-06 56.2 171 28.1
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 3.9e-06 55.8 140 29.3
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 3.9e-06 55.8 140 29.3
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 3.9e-06 55.8 139 27.3
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 3.9e-06 55.8 176 27.3
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 3.9e-06 55.8 165 29.1
CiPaw.01G135600 Carya illinoinensis HOM05D001578 ORTHO05D001207 5.1e-06 55.5 149 30.2
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.1e-06 55.5 172 25.6
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 5.1e-06 55.5 147 29.9
vmacro00361 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 5.1e-06 55.5 160 32.5
EL10Ac1g00256 Beta vulgaris HOM05D001445 ORTHO05D001261 6.6e-06 55.1 129 34.1
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 6.6e-06 55.1 137 26.3
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 6.6e-06 55.1 148 25.0
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 6.6e-06 55.1 138 29.0
Oeu063129.1 Olea europaea HOM05D009438 ORTHO05D010870 6.6e-06 55.1 160 26.2
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 6.6e-06 55.1 150 29.3
CiPaw.08G093400 Carya illinoinensis HOM05D003556 ORTHO05D003404 8.7e-06 54.7 141 28.4
Sabra01G0098200 Salix brachista HOM05D003556 ORTHO05D003404 8.7e-06 54.7 172 31.4
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 8.7e-06 54.7 154 27.3
TAR626G0884 Trochodendron aralioides HOM05D004113 ORTHO05D001207 8.7e-06 54.7 161 29.8
Zm00001eb187650 Zea mays HOM05D015189 ORTHO05D018061 8.7e-06 54.7 147 30.6


User provided reference genes

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