Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.5e-276 955.7 537 100.0
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.2e-133 479.2 271 89.7
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 5.7e-130 468.8 536 56.2
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 6.1e-124 448.7 502 55.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 9.8e-122 441.4 505 54.9
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.1e-120 436.4 266 95.1
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.7e-65 254.6 450 41.8
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.9e-65 253.8 594 38.2
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 8.7e-54 215.7 305 46.6
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 6.2e-52 209.5 543 34.8
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.1e-51 208.8 556 37.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 6.9e-51 206.1 531 34.7
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.9e-49 200.7 592 35.1
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 3.5e-47 193.7 310 44.2
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 6.0e-47 193.0 570 34.7
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 7.9e-47 192.6 564 36.0
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 7.9e-47 192.6 557 33.9
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.0e-46 192.2 560 35.0
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 5.1e-46 189.9 620 33.7
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.1e-45 188.7 486 36.0
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 3.3e-45 187.2 603 36.0
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 3.3e-45 187.2 447 36.2
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 7.4e-45 186.0 210 53.3
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.4e-43 181.8 215 55.3
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 4.5e-42 176.8 554 33.6
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 4.5e-42 176.8 547 34.6
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.3e-41 175.3 476 37.4
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.0e-41 173.3 604 33.8
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 5.0e-41 173.3 645 30.4
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 2.5e-40 171.0 396 39.9
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 2.5e-40 171.0 472 34.3
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 5.5e-40 169.9 439 34.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 5.5e-40 169.9 655 29.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 9.3e-40 169.1 558 33.5
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 4.6e-39 166.8 524 35.7
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 6.1e-39 166.4 667 28.9
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 6.1e-39 166.4 657 28.9
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 6.1e-39 166.4 433 35.3
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.8e-38 164.9 408 36.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 3.0e-38 164.1 570 33.2
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 3.9e-38 163.7 571 32.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 6.7e-38 162.9 556 32.9
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.3e-37 160.6 547 32.9
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 5.7e-37 159.8 584 31.7
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 9.7e-37 159.1 547 33.3
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.3e-36 158.7 530 33.0
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 2.2e-36 157.9 582 30.9
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.2e-36 157.9 549 32.6
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.8e-36 157.5 442 34.6
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.8e-36 157.5 548 33.2
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 6.3e-36 156.4 468 34.8
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.4e-35 154.5 550 32.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 3.1e-35 154.1 591 31.8
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.2e-34 152.1 348 37.6
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.2e-34 152.1 453 35.3
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.6e-34 151.0 453 35.3
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.3e-33 148.7 212 47.6
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 1.3e-33 148.7 551 32.1
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 2.2e-33 147.9 484 33.3
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.5e-33 146.4 472 34.1
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 8.5e-33 146.0 494 31.6
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 4.2e-32 143.7 510 30.6
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 4.2e-32 143.7 524 32.4
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 4.6e-31 140.2 548 31.6
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.0e-30 139.0 538 31.8
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 3.0e-30 137.5 337 34.7
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.5e-29 135.2 499 32.1
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 7.4e-29 132.9 405 35.8
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 9.7e-29 132.5 494 32.2
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.7e-28 131.7 516 32.2
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 2.8e-28 131.0 564 31.4
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.8e-28 131.0 337 34.1
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.8e-28 131.0 533 33.4
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.7e-28 130.6 543 32.6
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 3.7e-28 130.6 557 31.4
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 4.8e-28 130.2 573 32.8
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.1e-27 129.0 511 30.7
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.8e-27 128.3 448 31.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 3.1e-27 127.5 550 32.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.3e-27 126.7 513 30.2
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.5e-26 125.2 268 36.6
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.5e-26 125.2 313 34.8
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.0e-26 124.8 551 31.2
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 2.6e-26 124.4 274 35.4
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 3.4e-26 124.0 364 32.7
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 7.7e-26 122.9 557 29.4
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.3e-25 122.1 505 30.9
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 1.7e-25 121.7 495 31.5
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.5e-24 117.9 455 34.1
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 7.2e-24 116.3 504 30.2
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.6e-23 114.0 580 29.7
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.5e-21 108.6 469 31.1
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 7.4e-21 106.3 237 38.0
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.7e-20 104.0 220 34.5
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 3.1e-19 100.9 551 29.6
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 3.1e-19 100.9 455 34.7
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 5.3e-19 100.1 229 39.7
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.2e-18 99.0 541 31.8
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 9.4e-16 89.4 532 28.0
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 8.0e-15 86.3 381 33.3
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.0e-13 81.6 555 28.1
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.2e-12 78.2 542 26.6
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 4.1e-11 73.9 274 29.9
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 3.5e-10 70.9 90 46.7
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 5.0e-09 67.0 74 50.0
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 2.7e-07 61.2 62 58.1
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 8.0e-07 59.7 452 24.1


User provided reference genes

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