Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 1.3e-202 709.5 361 100.0
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 8.2e-157 557.4 376 74.5
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 1.5e-150 536.6 362 74.3
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 1.5e-137 493.4 361 66.5
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 8.8e-135 484.2 362 66.9
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 1.5e-134 483.4 363 67.2
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 3.4e-134 482.3 360 67.2
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 7.5e-134 481.1 363 66.4
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 7.5e-134 481.1 370 64.3
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 9.8e-134 480.7 365 67.1
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 1.3e-133 480.3 360 68.6
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 1.7e-133 479.9 372 65.3
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 3.7e-133 478.8 362 66.6
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 6.3e-133 478.0 372 65.9
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 6.3e-133 478.0 359 66.3
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 8.3e-133 477.6 360 65.8
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 1.4e-132 476.9 363 68.3
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 5.4e-132 474.9 379 64.1
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 1.2e-131 473.8 363 64.7
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 1.0e-130 470.7 373 65.7
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 1.3e-130 470.3 357 64.1
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 2.9e-130 469.2 361 65.4
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 5.0e-130 468.4 361 65.1
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 1.5e-129 466.8 363 63.6
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 1.5e-129 466.8 360 64.2
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 1.9e-129 466.5 329 71.4
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 3.2e-129 465.7 372 65.6
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 4.2e-129 465.3 362 64.1
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 5.5e-129 464.9 360 65.0
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 3.6e-128 462.2 373 64.1
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 1.8e-127 459.9 340 70.0
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 2.3e-127 459.5 362 64.4
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 2.3e-127 459.5 362 64.1
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 2.3e-127 459.5 362 63.3
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 4.0e-127 458.8 364 65.1
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 5.2e-127 458.4 363 63.6
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 2.6e-126 456.1 360 64.7
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 1.3e-125 453.8 359 64.1
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 1.7e-125 453.4 360 63.1
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 1.7e-125 453.4 358 63.7
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 3.7e-125 452.2 364 61.5
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 1.1e-124 450.7 357 63.0
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 7.0e-124 448.0 363 61.7
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 3.5e-123 445.7 364 61.8
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 1.0e-122 444.1 360 61.7
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 1.3e-122 443.7 361 62.3
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 1.7e-122 443.4 360 61.4
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 1.7e-122 443.4 361 62.0
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 1.1e-121 440.7 365 61.4
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 1.1e-121 440.7 360 62.2
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 1.9e-121 439.9 362 62.4
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 9.5e-121 437.6 376 60.4
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 1.6e-120 436.8 365 60.8
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 4.7e-120 435.3 367 62.1
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 1.8e-119 433.3 387 58.4
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 3.0e-119 432.6 361 61.5
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 3.0e-119 432.6 363 62.3
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 6.8e-119 431.4 362 61.3
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 8.9e-119 431.0 362 61.9
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 1.2e-118 430.6 367 61.3
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 1.5e-118 430.3 366 60.4
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 1.5e-118 430.3 382 58.9
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 4.4e-118 428.7 335 65.4
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 2.9e-117 426.0 361 60.9
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 6.4e-117 424.9 363 60.3
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 1.8e-116 423.3 364 59.1
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 9.2e-116 421.0 361 60.4
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 5.9e-115 418.3 365 59.5
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 5.9e-115 418.3 364 59.1
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 2.8e-112 409.5 359 56.5
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 2.8e-112 409.5 373 55.8
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea HOM05D006210 ORTHO05D007510 4.7e-112 408.7 348 62.6
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 4.7e-112 408.7 382 57.9
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 1.4e-111 407.1 364 56.9
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 9.8e-110 401.0 362 58.6
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 1.4e-108 397.1 423 53.2
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 1.9e-108 396.7 332 62.0
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 2.7e-107 392.9 362 59.7
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 4.6e-107 392.1 362 56.1
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 6.0e-107 391.7 359 57.7
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 2.5e-105 386.3 374 55.1
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 1.5e-102 377.1 353 56.7
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 5.4e-100 368.6 387 51.7
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea HOM05D006210 ORTHO05D007510 3.5e-99 365.9 343 57.7
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 5.4e-92 342.0 360 51.1
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 1.6e-91 340.5 362 50.8
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 3.3e-89 332.8 361 47.4
DCAR_000557 Daucus carota HOM05D006210 ORTHO05D007510 8.1e-88 328.2 238 71.0
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 3.1e-87 326.2 238 71.0
Pp3c19_11990 Physcomitrium patens HOM05D006210 ORTHO05D007510 8.9e-87 324.7 358 47.8
MD10G1174300 Malus domestica HOM05D006210 ORTHO05D007510 2.0e-86 323.6 238 69.7
CAN.G119.7 Capsicum annuum HOM05D006210 ORTHO05D007510 5.8e-86 322.0 245 69.4
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea HOM05D006210 ORTHO05D007510 5.4e-84 315.5 238 68.1
Solyc09g064380.3 Solanum lycopersicum HOM05D006210 ORTHO05D007510 2.1e-83 313.5 238 68.9
RcHm_v2.0_Chr6g0286041 Rosa chinensis HOM05D006210 ORTHO05D007510 5.1e-82 308.9 238 66.8
FAN24G1818 Fragaria x ananassa HOM05D006210 ORTHO05D007510 5.6e-81 305.4 238 65.5
Gorai.007G150600 Gossypium raimondii HOM05D006210 ORTHO05D007510 4.2e-76 289.3 335 49.9
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 5.4e-76 288.9 361 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis HOM05D006210 ORTHO05D007510 1.2e-75 287.7 298 49.3
Lsat_1_v5_gn_9_11700 Lactuca sativa HOM05D006210 ORTHO05D007510 2.7e-75 286.6 292 55.5
EL10Ac7g17713 Beta vulgaris HOM05D006210 ORTHO05D007510 1.6e-72 277.3 238 60.5
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 1.7e-69 267.3 317 49.5
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 1.1e-68 264.6 361 45.2
CBR_g36953 Chara braunii HOM05D006210 ORTHO05D007510 9.3e-60 235.0 302 42.1
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 1.4e-55 221.1 262 45.8
Sc05g0002800 Simmondsia chinensis HOM05D006210 ORTHO05D007510 6.5e-45 185.7 362 34.0
PRCOL_00004543 Prasinoderma coloniale HOM05D006210 ORTHO05D007510 1.8e-42 177.6 363 33.3
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 1.5e-38 164.5 130 56.9
Hma1.2p1_0559F.1_g178660 Hydrangea macrophylla HOM05D000705 ORTHO05D007510 5.5e-36 156.0 105 74.3
Cre08.g375650 Chlamydomonas reinhardtii HOM05D006210 ORTHO05D007510 2.1e-35 154.1 336 30.1
MCO01G218 Micromonas commoda HOM05D006210 ORTHO05D007510 2.7e-35 153.7 369 32.5
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 3.6e-35 153.3 126 59.5
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 2.3e-34 150.6 127 56.7
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 2.8e-32 143.7 125 55.2
HanXRQChr01g0013201 Helianthus annuus HOM05D006210 ORTHO05D007510 5.3e-31 139.4 127 57.5
MD05G1186500 Malus domestica HOM05D006210 ORTHO05D007510 1.3e-29 134.8 90 76.7
vmacro02716 Vaccinium macrocarpon HOM05D006210 ORTHO05D007510 2.9e-21 107.1 98 49.0
Actinidia37561 Actinidia chinensis HOM05D006210 ORTHO05D007510 2.1e-19 100.9 106 43.4
TAR349G0001 Trochodendron aralioides HOM05D006210 ORTHO05D007510 5.2e-18 96.3 187 36.9
MD05G1186300 Malus domestica HOM05D006210 ORTHO05D007510 1.8e-15 87.8 92 55.4
Sc05g0002820 Simmondsia chinensis HOM05D006210 ORTHO05D007510 3.8e-13 80.1 100 37.0
SEGI_25119 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 6.5e-13 79.3 49 67.3
Cfa024968 Carpinus fangiana HOM05D006210 ORTHO05D007510 1.6e-11 74.7 240 28.3
Zm00001eb416010 Zea mays HOM05D017284 ORTHO05D007510 5.2e-10 69.7 71 50.7
SMO196G0213 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 2.2e-08 64.3 103 35.9
SMO234G0002 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 2.8e-08 63.9 128 32.8
Ciclev10030128m.g Citrus clementina HOM05D005592 ORTHO05D006067 4.1e-07 60.1 100 39.0
Hund14611 Selenicereus undatus HOM05D002462 ORTHO05D002893 7.0e-07 59.3 140 37.1
BraA03t15714Z Brassica rapa HOM05D001340 ORTHO05D005342 9.2e-07 58.9 125 38.4
MD07G1239100 Malus domestica HOM05D005592 ORTHO05D006067 5.9e-06 56.2 107 34.6
Sopen03g037650 Solanum pennellii HOM05D001310 ORTHO05D001283 5.9e-06 56.2 122 37.7
Thhalv10023436m.g Eutrema salsugineum HOM05D001340 ORTHO05D005342 7.8e-06 55.8 166 31.3
Nitab4.5_0003401g0010 Nicotiana tabacum HOM05D001310 ORTHO05D001283 7.8e-06 55.8 122 37.7


User provided reference genes

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