Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00293 Erythranthe guttata HOM05D000744 ORTHO05D000332 9.0e-146 520.4 291 100.0
Migut.J00074 Erythranthe guttata HOM05D000744 ORTHO05D000332 2.1e-33 147.1 190 59.5
MSTRG.5524 Avicennia marina HOM05D000744 ORTHO05D000332 6.4e-19 99.0 193 42.5
Peaxi162Scf00744g00017 Petunia axillaris HOM05D000744 ORTHO05D000332 1.1e-15 88.2 199 39.7
SGA_v2.0_scaffold85G26661 Striga asiatica HOM05D000744 ORTHO05D000332 9.6e-15 85.1 185 42.7
CAN.G1189.2 Capsicum annuum HOM05D000744 ORTHO05D000332 1.6e-14 84.3 204 40.2
CAN.G133.2 Capsicum annuum HOM05D000744 ORTHO05D000332 1.6e-14 84.3 204 40.2
Dinv35440 Davidia involucrata HOM05D000744 ORTHO05D000332 1.6e-14 84.3 207 40.6
Nitab4.5_0004394g0030 Nicotiana tabacum HOM05D000744 ORTHO05D000332 1.1e-13 81.6 201 38.8
Nitab4.5_0000047g0020 Nicotiana tabacum HOM05D000744 ORTHO05D000332 1.4e-13 81.3 201 38.8
Manes.08G174300 Manihot esculenta HOM05D000744 ORTHO05D000332 5.3e-13 79.3 198 37.4
unitig_27.g24877 Utricularia gibba HOM05D000744 ORTHO05D000332 3.4e-12 76.6 192 36.5
EL10Ac7g17035 Beta vulgaris HOM05D000744 ORTHO05D000332 7.6e-12 75.5 210 36.7
Potri.006G106500 Populus trichocarpa HOM05D000744 ORTHO05D000332 3.8e-11 73.2 204 36.3
Lj3A943T27 Lonicera japonica HOM05D000744 ORTHO05D000332 6.5e-11 72.4 202 38.6
Sc02g0000730 Simmondsia chinensis HOM05D000744 ORTHO05D000332 1.4e-10 71.2 209 34.4
Rhsim05G0228100 Rhododendron simsii HOM05D000744 ORTHO05D000332 2.5e-10 70.5 222 34.7
PGSC0003DMG401017032 Solanum tuberosum HOM05D000744 ORTHO05D000332 3.2e-10 70.1 201 37.3
Ciclev10011304m.g Citrus clementina HOM05D000744 ORTHO05D000332 4.2e-10 69.7 212 37.3
Solyc09g014790.4 Solanum lycopersicum HOM05D000744 ORTHO05D000332 1.2e-09 68.2 202 36.6
Sopen09g007670 Solanum pennellii HOM05D000744 ORTHO05D000332 1.2e-09 68.2 202 36.6
Potri.016G131900 Populus trichocarpa HOM05D000744 ORTHO05D000332 3.5e-09 66.6 213 34.7
Duzib212G0925 Durio zibethinus HOM05D000744 ORTHO05D000332 4.6e-09 66.2 230 34.8
Zm00001eb290360 Zea mays HOM05D000744 ORTHO05D000332 2.3e-08 63.9 195 34.9
THA.LOC104823363 Tarenaya hassleriana HOM05D000744 ORTHO05D000332 3.0e-08 63.5 215 33.5
Actinidia29054 Actinidia chinensis HOM05D000744 ORTHO05D000332 6.7e-08 62.4 215 33.5
Duzib268G0868 Durio zibethinus HOM05D000744 ORTHO05D000332 6.7e-08 62.4 232 30.6
Atru.chr8.2362 Acer truncatum HOM05D000744 ORTHO05D000332 8.7e-08 62.0 223 37.2
CARHR133030 Cardamine hirsuta HOM05D000744 ORTHO05D000332 1.1e-07 61.6 200 35.0
Actinidia11536 Actinidia chinensis HOM05D000744 ORTHO05D000332 1.5e-07 61.2 215 34.0
arahy.Tifrunner.gnm1.ann1.1L601T Arachis hypogaea HOM05D000744 ORTHO05D000332 1.5e-07 61.2 228 29.8
arahy.Tifrunner.gnm1.ann1.N0BIWD Arachis hypogaea HOM05D000744 ORTHO05D000332 1.5e-07 61.2 228 29.8
arahy.Tifrunner.gnm1.ann1.RY9WXU Arachis hypogaea HOM05D000744 ORTHO05D000332 1.5e-07 61.2 228 31.1
DCAR_018658 Daucus carota HOM05D000744 ORTHO05D000332 1.5e-07 61.2 193 38.3
Sp4g20730 Schrenkiella parvula HOM05D000744 ORTHO05D000332 1.5e-07 61.2 206 32.0
arahy.Tifrunner.gnm1.ann1.NX1HSL Arachis hypogaea HOM05D000744 ORTHO05D000332 1.9e-07 60.8 228 29.8
Carub.0004s2037 Capsella rubella HOM05D000744 ORTHO05D000332 1.9e-07 60.8 157 38.2
MD12G1183500 Malus domestica HOM05D000744 ORTHO05D000332 2.5e-07 60.5 245 33.9
AT2G38410 Arabidopsis thaliana HOM05D000744 ORTHO05D000332 3.3e-07 60.1 157 37.6
AL4G35630 Arabidopsis lyrata HOM05D000744 ORTHO05D000332 4.3e-07 59.7 157 37.6
PGR004G2390 Punica granatum HOM05D000744 ORTHO05D000332 4.3e-07 59.7 237 30.0
Gorai.005G006700 Gossypium raimondii HOM05D000744 ORTHO05D000332 5.7e-07 59.3 231 32.5
Lalb_Chr01g0023581 Lupinus albus HOM05D000744 ORTHO05D000332 5.7e-07 59.3 210 33.3
Prupe.6G288000 Prunus persica HOM05D000744 ORTHO05D000332 5.7e-07 59.3 229 34.9
Gohir.D02G006000 Gossypium hirsutum HOM05D000744 ORTHO05D000332 7.4e-07 58.9 231 32.5
RcHm_v2.0_Chr3g0461281 Rosa chinensis HOM05D000744 ORTHO05D000332 9.6e-07 58.5 248 34.7
TWI74G1268 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 9.6e-07 58.5 238 30.7
Ca_07737_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 1.3e-06 58.2 219 32.4
Lsat_1_v5_gn_8_118661 Lactuca sativa HOM05D000744 ORTHO05D000332 1.3e-06 58.2 137 46.0
Cc06_g00600 Coffea canephora HOM05D000744 ORTHO05D000332 1.6e-06 57.8 205 30.2
Glyma.09G278600 Glycine max HOM05D000744 ORTHO05D000332 2.1e-06 57.4 221 29.4
C04p09170 Brassica napus HOM05D000744 ORTHO05D000332 2.8e-06 57.0 171 35.7
CANSAT35G1990 Cannabis sativa HOM05D000744 ORTHO05D000332 6.2e-06 55.8 233 31.8
Lalb_Chr03g0043671 Lupinus albus HOM05D000744 ORTHO05D000332 6.2e-06 55.8 217 32.7


User provided reference genes

Program Settings