Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.4e-187 659.4 338 100.0
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 1.4e-121 440.3 475 54.9
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 8.3e-111 404.4 481 51.6
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 3.3e-107 392.5 370 59.5
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 8.9e-105 384.4 461 50.5
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 1.3e-100 370.5 350 59.7
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 7.3e-99 364.8 447 49.0
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 2.3e-97 359.8 452 47.6
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 2.6e-96 356.3 447 48.1
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 3.4e-96 355.9 448 45.8
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 7.6e-96 354.8 457 47.3
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 5.4e-94 348.6 472 45.1
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 6.0e-93 345.1 475 45.3
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 3.0e-92 342.8 439 47.2
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 1.5e-91 340.5 455 45.3
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 2.8e-90 336.3 452 46.5
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 2.4e-89 333.2 466 45.5
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 3.1e-89 332.8 425 47.5
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 3.1e-89 332.8 488 44.5
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 4.0e-89 332.4 466 45.7
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 2.0e-88 330.1 443 45.1
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.4e-88 328.9 448 45.1
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 5.8e-88 328.6 433 46.2
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 5.8e-88 328.6 497 43.3
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.8e-87 325.9 458 43.7
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 3.8e-87 325.9 458 44.1
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 3.8e-87 325.9 448 44.9
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 3.8e-87 325.9 503 41.6
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 4.9e-87 325.5 502 42.4
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.4e-86 323.2 447 45.2
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.4e-86 323.2 440 45.9
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 3.2e-86 322.8 429 45.7
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 3.2e-86 322.8 450 42.9
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 4.2e-86 322.4 454 45.2
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 4.2e-86 322.4 500 42.2
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 5.4e-86 322.0 461 45.1
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 5.4e-86 322.0 448 44.6
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 7.1e-86 321.6 445 45.2
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 2.1e-85 320.1 463 42.3
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 6.0e-85 318.5 456 43.9
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.0e-84 317.8 462 44.2
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.7e-84 317.0 462 44.2
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 1.7e-84 317.0 501 42.1
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 3.9e-84 315.8 405 46.4
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 3.9e-84 315.8 462 43.5
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 5.1e-84 315.5 465 43.0
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 5.1e-84 315.5 486 41.8
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 5.1e-84 315.5 504 41.7
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 6.6e-84 315.1 451 43.5
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 8.7e-84 314.7 498 41.8
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 1.1e-83 314.3 455 43.3
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 1.5e-83 313.9 458 42.8
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 1.5e-83 313.9 458 43.2
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 2.5e-83 313.2 498 41.2
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 2.1e-82 310.1 475 42.9
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 2.8e-82 309.7 334 53.9
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 8.1e-82 308.1 499 39.9
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.8e-81 307.0 453 43.3
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 2.4e-81 306.6 452 40.9
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 4.0e-81 305.8 515 40.4
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 1.2e-80 304.3 503 40.8
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 1.2e-80 304.3 469 42.9
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 4.9e-79 298.9 503 41.2
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.4e-78 297.4 463 43.0
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.9e-78 297.0 462 43.5
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.2e-78 295.8 486 39.9
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.2e-77 294.3 464 42.2
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 2.1e-77 293.5 429 42.2
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 7.9e-77 291.6 436 42.2
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 1.0e-76 291.2 429 41.3
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.8e-76 290.4 430 41.4
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 6.7e-76 288.5 433 42.7
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 8.7e-76 288.1 430 41.2
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 1.5e-75 287.3 434 43.3
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.9e-75 287.0 410 41.2
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 4.3e-75 285.8 436 40.4
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 5.6e-75 285.4 428 40.9
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 3.7e-74 282.7 481 39.9
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 8.1e-74 281.6 438 41.8
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 2.4e-73 280.0 460 38.9
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 9.0e-73 278.1 464 38.6
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 5.8e-72 275.4 433 41.6
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 1.7e-71 273.9 432 40.0
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 2.1e-69 266.9 482 36.1
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 2.7e-69 266.5 427 40.3
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.9e-67 260.4 174 74.1
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 7.4e-67 258.5 202 66.8
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 2.1e-66 256.9 174 72.4
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 9.3e-62 241.5 172 70.3
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 2.5e-59 233.4 171 69.6
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 8.2e-58 228.4 385 41.8
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.2e-56 224.6 183 63.4
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 6.5e-55 218.8 170 63.5
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 9.3e-54 214.9 376 39.4
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 7.9e-53 211.8 371 38.3
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.3e-47 194.5 337 37.4
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 1.3e-47 194.5 394 35.8
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 5.5e-46 189.1 172 54.7
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 3.3e-43 179.9 123 72.4
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 2.6e-40 170.2 134 64.9
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 7.7e-40 168.7 175 46.9
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.8e-39 166.4 123 68.3
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 4.2e-38 162.9 266 39.1
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.9e-36 156.4 333 34.2
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.7e-34 151.0 175 42.3
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.2e-32 144.8 402 28.6
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.7e-31 141.0 174 44.8
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.3e-27 126.7 144 48.6
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-25 121.7 93 66.7
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 4.1e-25 119.8 91 63.7
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.6e-24 117.9 283 32.9
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 5.0e-23 112.8 70 77.1
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.7e-15 87.8 48 85.4
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 2.3e-15 87.4 264 27.7
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 9.5e-14 82.0 128 44.5
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 3.6e-13 80.1 50 80.0
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 1.4e-12 78.2 54 70.4
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 1.1e-09 68.6 54 63.0
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 1.2e-08 65.1 171 30.4
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 2.0e-08 64.3 90 47.8
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 5.9e-08 62.8 115 34.8
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 6.6e-07 59.3 58 58.6


User provided reference genes

Program Settings