Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.5e-234 815.8 431 100.0
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.9e-176 622.9 405 81.2
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.4e-174 616.7 408 78.9
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.9e-168 596.3 432 74.5
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 7.0e-163 577.8 433 71.1
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.6e-162 576.6 407 73.7
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 2.6e-157 559.3 401 70.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.1e-155 552.4 418 69.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.1e-155 552.0 404 70.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 7.0e-155 551.2 404 71.8
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.2e-154 550.4 400 71.0
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.7e-154 549.3 384 73.7
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.5e-154 548.5 378 74.9
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 5.0e-153 545.0 382 73.6
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.5e-152 542.7 384 72.4
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.2e-151 540.4 406 68.7
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.2e-151 540.4 395 71.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.1e-151 539.7 404 70.5
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.1e-151 539.7 404 70.5
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.6e-151 538.9 380 74.5
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.4e-150 537.0 378 73.3
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.3e-150 536.2 379 72.8
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.0e-150 535.4 395 70.4
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 4.0e-150 535.4 373 74.0
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 5.2e-150 535.0 375 73.3
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 8.9e-150 534.3 390 71.8
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.5e-149 533.5 381 73.5
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.0e-149 533.1 373 73.2
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 2.6e-149 532.7 395 71.1
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 2.6e-149 532.7 390 71.8
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 5.8e-149 531.6 400 70.5
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 5.8e-149 531.6 381 72.7
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 5.8e-149 531.6 399 69.7
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 7.5e-149 531.2 406 69.7
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 7.5e-149 531.2 400 70.0
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 7.5e-149 531.2 371 74.9
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 9.8e-149 530.8 372 73.1
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 9.8e-149 530.8 373 73.7
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.3e-148 530.4 383 72.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.9e-148 529.3 368 73.9
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.9e-148 529.3 392 69.4
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.9e-148 529.3 378 72.5
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 3.7e-148 528.9 386 72.3
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.1e-147 527.3 361 75.9
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.4e-147 526.9 385 70.9
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.4e-147 526.2 400 69.2
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.4e-147 526.2 400 68.8
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 5.4e-147 525.0 385 71.7
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 5.4e-147 525.0 371 73.0
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.6e-146 523.5 383 71.0
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.6e-146 521.9 360 74.2
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 6.0e-146 521.5 382 69.4
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 3.0e-145 519.2 369 72.6
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 5.0e-145 518.5 384 70.8
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.1e-144 517.3 370 73.2
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.3e-144 515.8 423 65.5
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 4.3e-144 515.4 353 74.5
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.6e-144 515.0 361 73.1
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 2.8e-143 512.7 361 71.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 4.7e-143 511.9 359 73.3
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.8e-142 510.0 360 73.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.2e-141 507.3 407 65.1
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.4e-139 499.6 404 63.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.1e-138 496.5 361 72.0
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 1.7e-137 493.4 382 68.8
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 2.3e-137 493.0 400 65.0
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 6.6e-137 491.5 384 68.2
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 7.3e-136 488.0 401 62.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.1e-131 474.2 389 62.5
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 9.5e-128 461.1 369 65.9
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 9.5e-128 461.1 369 65.9
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.0e-122 441.8 397 62.7
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 3.3e-120 436.0 399 60.7
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 9.6e-120 434.5 408 60.8
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.0e-114 415.2 373 62.5
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 4.5e-109 399.1 389 55.3
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 3.4e-101 372.9 280 68.2
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 5.8e-101 372.1 369 56.4
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.9e-100 369.8 257 73.2
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.5e-99 366.7 277 68.6
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.3e-96 356.3 317 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 7.1e-91 338.6 291 62.2
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 9.4e-83 311.6 255 63.5
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.5e-80 303.5 234 65.4
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 4.1e-78 296.2 372 46.2
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 4.4e-72 276.2 179 77.1
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 2.2e-60 237.3 208 62.0
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.9e-53 212.6 148 74.3
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.4e-41 174.9 125 66.4
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.2e-39 167.5 128 63.3
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.2e-08 65.5 77 51.9


User provided reference genes

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