Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 4.1e-143 511.5 285 100.0
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 2.1e-86 323.2 301 61.1
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 2.4e-71 273.1 365 47.4
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 5.4e-71 271.9 301 54.5
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 1.3e-59 234.2 309 44.3
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 3.1e-58 229.6 311 46.6
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 4.0e-58 229.2 291 46.4
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 2.6e-57 226.5 295 45.1
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 3.4e-57 226.1 309 47.2
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 4.5e-57 225.7 313 45.4
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 5.8e-57 225.3 308 45.8
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 2.2e-56 223.4 292 45.2
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 3.8e-56 222.6 308 45.5
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 8.4e-56 221.5 323 44.0
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 3.2e-55 219.5 310 44.2
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 5.5e-55 218.8 311 43.4
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 9.3e-55 218.0 295 44.4
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.2e-54 217.6 312 44.2
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.2e-54 217.6 307 43.3
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 1.6e-54 217.2 300 44.3
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 2.7e-54 216.5 286 43.4
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 2.7e-54 216.5 307 44.0
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.6e-54 215.7 311 43.7
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.6e-54 215.7 311 43.7
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.3e-53 213.4 328 42.1
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 5.1e-53 212.2 325 41.2
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 8.7e-53 211.5 280 46.1
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 1.9e-52 210.3 314 42.4
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 2.5e-52 209.9 314 42.7
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 2.5e-52 209.9 314 42.4
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.1e-51 206.8 308 40.6
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.1e-51 206.8 279 46.6
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 2.1e-51 206.8 276 44.9
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 2.1e-51 206.8 307 42.0
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.7e-51 206.1 314 41.7
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 8.2e-51 204.9 302 42.1
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 1.1e-50 204.5 295 44.1
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.1e-50 204.5 318 40.6
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 1.4e-50 204.1 294 43.5
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 2.4e-50 203.4 280 45.0
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 2.4e-50 203.4 285 43.9
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 9.0e-50 201.4 318 41.2
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 1.2e-49 201.1 285 42.5
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 1.5e-49 200.7 308 43.2
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 1.3e-48 197.6 292 41.1
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 2.2e-48 196.8 313 40.3
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.2e-48 196.8 313 40.3
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 2.2e-48 196.8 283 43.5
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 2.2e-48 196.8 292 42.5
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.2e-48 196.8 284 40.8
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 2.9e-48 196.4 284 42.3
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 4.9e-48 195.7 312 40.7
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 4.9e-48 195.7 295 42.7
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 6.5e-48 195.3 257 45.9
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 1.1e-47 194.5 285 42.5
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 1.9e-47 193.7 309 38.8
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 5.5e-47 192.2 284 42.3
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 1.2e-46 191.0 298 39.9
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 2.1e-46 190.3 269 43.9
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 2.7e-46 189.9 299 40.1
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 4.6e-46 189.1 284 40.5
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 6.0e-46 188.7 287 43.2
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 6.0e-46 188.7 294 41.2
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 1.0e-45 188.0 297 41.8
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.3e-45 186.8 321 39.9
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 3.0e-45 186.4 290 40.3
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 5.1e-45 185.7 295 39.3
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 8.7e-45 184.9 307 40.7
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 8.7e-45 184.9 337 38.6
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 1.1e-44 184.5 299 38.5
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 2.5e-44 183.3 292 38.7
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 5.7e-44 182.2 312 38.8
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 7.4e-44 181.8 298 39.6
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 7.4e-44 181.8 294 38.4
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 1.6e-43 180.6 303 38.6
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 1.6e-43 180.6 328 40.5
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 3.7e-43 179.5 316 38.3
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 2.4e-42 176.8 287 38.3
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 4.1e-42 176.0 314 39.2
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 6.9e-42 175.3 302 39.4
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 1.2e-41 174.5 305 40.3
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 1.5e-41 174.1 283 39.2
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 1.5e-41 174.1 331 41.4
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.0e-41 173.7 303 39.3
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 2.6e-41 173.3 307 37.5
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 4.5e-41 172.6 333 40.2
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 5.9e-41 172.2 373 34.0
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 6.5e-40 168.7 309 38.5
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.1e-39 167.9 349 35.8
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 1.4e-39 167.5 280 38.2
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 1.4e-39 167.5 280 38.2
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 7.2e-39 165.2 310 37.4
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 7.2e-39 165.2 282 37.2
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 7.2e-39 165.2 328 37.2
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 2.1e-38 163.7 273 42.5
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 6.1e-38 162.2 279 38.7
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 7.9e-38 161.8 303 35.3
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 1.0e-37 161.4 282 40.1
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 1.4e-37 161.0 280 37.1
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 3.9e-37 159.5 303 34.7
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 1.1e-36 157.9 199 48.7
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 4.8e-35 152.5 276 38.0
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 8.2e-35 151.8 302 37.7
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 1.4e-34 151.0 287 35.2
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 9.1e-34 148.3 114 61.4
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 1.5e-33 147.5 303 34.3
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 2.6e-33 146.7 280 39.6
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 5.9e-33 145.6 304 36.8
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 5.9e-33 145.6 410 31.2
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 7.7e-33 145.2 285 36.5
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 1.3e-32 144.4 288 35.4
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.9e-31 140.6 321 37.1
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.6e-30 137.5 107 61.7
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.6e-30 136.3 225 37.8
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 3.9e-29 132.9 115 56.5
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 1.7e-27 127.5 109 58.7
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 6.3e-27 125.6 122 54.1
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 2.6e-25 120.2 128 50.8
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 4.2e-23 112.8 301 32.2
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 1.8e-21 107.5 234 32.9
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 6.7e-21 105.5 241 34.0
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 5.7e-20 102.4 135 40.7
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 1.1e-18 98.2 123 41.5
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 1.2e-17 94.7 270 29.3
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 3.8e-16 89.7 226 31.9
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 5.0e-16 89.4 341 25.5
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 8.5e-16 88.6 212 37.3
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 2.5e-15 87.0 109 42.2
QL01p018054 Quercus lobata HOM05D001447 ORTHO05D005923 4.2e-15 86.3 68 63.2
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 5.2e-13 79.3 62 62.9
Aa31LG7G13510 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.2e-12 78.2 119 44.5
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 1.5e-12 77.8 312 25.6
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.7e-11 74.3 55 65.5
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 3.7e-11 73.2 111 37.8
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 3.1e-10 70.1 95 35.8
TAR623G1702 Trochodendron aralioides HOM05D001447 ORTHO05D005923 4.1e-10 69.7 104 43.3
BolC4t26880H Brassica oleracea HOM05D001447 ORTHO05D005923 1.6e-09 67.8 225 25.3
VMungo1383G1695 Vigna mungo HOM05D001447 ORTHO05D005923 1.6e-09 67.8 101 40.6
BcaB06g26464 Brassica carinata HOM05D001447 ORTHO05D005923 3.5e-09 66.6 155 31.0
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 3.5e-09 66.6 58 58.6
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 3.5e-09 66.6 312 24.7
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 8.5e-08 62.0 95 32.6
BcaC01g05497 Brassica carinata HOM05D001447 ORTHO05D005923 3.6e-06 56.6 74 35.1


User provided reference genes

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