Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 1.4e-102 376.3 195 100.0
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.2e-87 325.9 196 85.7
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.6e-82 309.7 195 79.0
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.0e-81 307.0 193 82.4
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.0e-81 307.0 193 82.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.0e-81 307.0 191 82.2
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 6.8e-81 304.3 193 81.9
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 8.8e-81 303.9 194 79.9
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.2e-80 303.5 194 79.9
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 2.6e-80 302.4 195 77.9
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 7.5e-80 300.8 195 77.9
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 7.5e-80 300.8 195 77.9
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 9.8e-80 300.4 194 79.9
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.7e-79 299.7 195 77.4
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.7e-79 299.7 193 79.3
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.4e-78 296.6 195 77.4
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.8e-78 296.2 180 82.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.8e-78 296.2 196 78.6
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.4e-78 295.8 193 77.2
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 4.1e-78 295.0 196 77.0
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 5.4e-78 294.7 194 76.8
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.0e-77 292.7 176 83.0
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-77 291.6 195 75.4
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 5.9e-77 291.2 195 76.4
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 7.7e-77 290.8 193 75.6
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 7.7e-77 290.8 194 75.3
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.0e-76 290.4 196 76.0
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.7e-76 289.7 196 73.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 2.9e-76 288.9 197 74.6
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.9e-76 288.9 196 74.0
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 5.0e-76 288.1 197 75.1
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 5.0e-76 288.1 181 80.7
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 5.0e-76 288.1 193 76.2
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 5.0e-76 288.1 194 76.8
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 6.5e-76 287.7 193 74.1
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 6.5e-76 287.7 193 74.1
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 6.5e-76 287.7 193 74.1
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 6.5e-76 287.7 197 73.6
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 8.6e-76 287.3 196 71.9
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 8.6e-76 287.3 193 75.1
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.1e-75 287.0 176 80.7
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.5e-75 286.6 196 74.5
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.9e-75 286.2 193 74.1
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.9e-75 286.2 195 74.9
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 2.5e-75 285.8 195 74.4
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 3.2e-75 285.4 193 74.6
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 3.2e-75 285.4 193 73.6
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 4.2e-75 285.0 196 74.0
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 4.2e-75 285.0 197 72.6
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 7.2e-75 284.3 197 72.6
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 9.5e-75 283.9 189 74.1
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 9.5e-75 283.9 193 74.1
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 9.5e-75 283.9 196 75.0
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.2e-74 283.5 193 72.5
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.2e-74 283.5 193 75.1
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.6e-74 283.1 193 75.1
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 2.1e-74 282.7 187 76.5
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 2.8e-74 282.3 195 73.8
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 2.8e-74 282.3 193 74.6
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 3.6e-74 282.0 194 73.2
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.6e-74 282.0 193 74.1
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 4.7e-74 281.6 193 72.0
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 4.7e-74 281.6 198 75.3
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 6.1e-74 281.2 195 74.9
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.1e-74 281.2 193 74.1
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 6.1e-74 281.2 195 73.8
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.0e-73 280.4 193 73.6
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.0e-73 280.4 193 73.6
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.8e-73 279.6 194 72.2
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.8e-73 279.6 186 74.2
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 3.0e-73 278.9 195 73.3
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 3.0e-73 278.9 196 73.5
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 4.0e-73 278.5 182 76.4
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 5.2e-73 278.1 193 73.1
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 6.8e-73 277.7 182 76.4
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 1.5e-72 276.6 196 71.4
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 3.4e-72 275.4 196 71.9
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.4e-72 275.4 196 70.9
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 4.4e-72 275.0 194 71.1
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 4.4e-72 275.0 195 73.3
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 9.8e-72 273.9 194 71.1
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 2.2e-71 272.7 164 81.1
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.7e-71 271.9 177 75.1
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 4.9e-71 271.6 195 71.3
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 8.3e-71 270.8 211 68.2
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-70 270.4 187 74.3
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.8e-70 269.6 226 64.2
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 2.0e-69 266.2 196 69.4
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.5e-69 265.4 214 66.4
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 3.5e-69 265.4 189 68.8
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 2.3e-68 262.7 217 63.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-67 260.4 198 70.7
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 2.1e-66 256.1 179 69.8
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.6e-66 255.4 308 49.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 3.6e-66 255.4 196 67.9
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 5.2e-65 251.5 161 78.9
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 6.8e-65 251.1 189 68.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.8e-62 243.0 229 58.1
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 5.4e-62 241.5 158 75.9
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.1e-58 229.6 198 61.6
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 3.3e-51 205.7 145 69.7
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 2.8e-50 202.6 116 86.2
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.0e-48 196.4 126 74.6
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 1.7e-47 193.4 116 81.0
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.1e-46 190.7 134 73.1
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.9e-46 189.9 125 74.4
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 5.4e-46 188.3 106 85.8
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.6e-45 186.8 120 77.5
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.0e-44 184.1 124 72.6
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 3.9e-44 182.2 132 67.4
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 2.4e-41 172.9 108 77.8
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 1.8e-33 146.7 161 46.0
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 6.9e-33 144.8 138 57.2
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 9.9e-32 141.0 158 49.4
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 4.9e-31 138.7 169 50.3
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 8.1e-26 121.3 138 46.4
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 4.0e-25 119.0 83 71.1
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 7.6e-24 114.8 167 41.3
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.3e-23 114.0 198 41.4
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.9e-23 112.1 224 34.8
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-20 104.4 125 47.2
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 2.1e-10 70.1 167 31.1
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.1e-09 67.8 36 91.7
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 2.4e-09 66.6 55 67.3
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-08 62.0 48 62.5
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 7.6e-08 61.6 71 43.7


User provided reference genes

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