Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00006 Erythranthe guttata HOM05D007466 ORTHO05D002463 1.5e-60 236.1 130 100.0
Migut.H02119 Erythranthe guttata HOM05D007466 ORTHO05D002463 4.5e-57 224.6 130 94.6
Migut.H01222 Erythranthe guttata HOM05D007466 ORTHO05D002463 2.7e-49 198.7 124 87.9
Oeu048075.1 Olea europaea HOM05D007466 ORTHO05D002463 4.9e-27 124.8 112 59.8
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 6.6e-24 114.4 125 52.8
Dinv18525 Davidia involucrata HOM05D007466 ORTHO05D002463 8.6e-24 114.0 119 50.4
CSS0032012 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 1.9e-23 112.8 120 47.5
Prupe.3G131400 Prunus persica HOM05D007466 ORTHO05D002463 5.6e-23 111.3 112 46.4
MD17G1239100 Malus domestica HOM05D007466 ORTHO05D002463 1.6e-22 109.8 112 47.3
Nn1g07029 Nelumbo nucifera HOM05D007466 ORTHO05D002463 2.8e-22 109.0 120 46.7
HanXRQChr14g0459021 Helianthus annuus HOM05D007466 ORTHO05D002463 3.6e-22 108.6 124 46.8
Manes.13G072400 Manihot esculenta HOM05D007466 ORTHO05D002463 4.7e-22 108.2 111 50.5
Sc06g0006090 Simmondsia chinensis HOM05D007466 ORTHO05D002463 8.1e-22 107.5 112 45.5
DCAR_021185 Daucus carota HOM05D007466 ORTHO05D002463 1.1e-21 107.1 128 44.5
COL.COLO4_27678 Corchorus olitorius HOM05D007466 ORTHO05D002463 2.4e-21 105.9 124 46.8
TPR.G4193 Trifolium pratense HOM05D007466 ORTHO05D002463 2.4e-21 105.9 111 48.6
Lalb_Chr22g0349591 Lupinus albus HOM05D007466 ORTHO05D002463 3.1e-21 105.5 114 54.4
Lsat_1_v5_gn_5_103881 Lactuca sativa HOM05D007466 ORTHO05D002463 6.8e-21 104.4 124 43.5
MD09G1246300 Malus domestica HOM05D007466 ORTHO05D002463 6.8e-21 104.4 113 46.0
Manes.13G072500 Manihot esculenta HOM05D007466 ORTHO05D002463 6.8e-21 104.4 111 48.6
PGR042G2713 Punica granatum HOM05D007466 ORTHO05D002463 8.9e-21 104.0 112 45.5
EL10Ac2g04092 Beta vulgaris HOM05D007466 ORTHO05D002463 1.5e-20 103.2 129 43.4
Medtr2g088760 Medicago truncatula HOM05D007466 ORTHO05D002463 1.5e-20 103.2 111 48.6
VMungo1080G0180 Vigna mungo HOM05D007466 ORTHO05D002463 1.5e-20 103.2 111 45.9
arahy.Tifrunner.gnm1.ann1.N3UINY Arachis hypogaea HOM05D007466 ORTHO05D002463 2.0e-20 102.8 111 48.6
Ca_01590_v3 Cicer arietinum L. HOM05D007466 ORTHO05D002463 2.0e-20 102.8 111 46.8
Solyc07g052500.1 Solanum lycopersicum HOM05D007466 ORTHO05D002463 2.0e-20 102.8 125 44.8
TWI36G1433 Tripterygium wilfordii HOM05D007466 ORTHO05D002463 2.0e-20 102.8 112 47.3
Cc00_g30040 Coffea canephora HOM05D007466 ORTHO05D002463 2.6e-20 102.4 124 46.0
Phvul.005G113900 Phaseolus vulgaris HOM05D007466 ORTHO05D002463 2.6e-20 102.4 111 46.8
GSVIVG01030614001 Vitis vinifera HOM05D007466 ORTHO05D002463 4.4e-20 101.7 119 42.9
Duzib251G0094 Durio zibethinus HOM05D007466 ORTHO05D002463 5.8e-20 101.3 112 45.5
Nitab4.5_0005894g0010 Nicotiana tabacum HOM05D007466 ORTHO05D002463 5.8e-20 101.3 124 49.2
Eucgr.A01722 Eucalyptus grandis HOM05D007466 ORTHO05D002463 7.6e-20 100.9 124 42.7
CAN.G921.12 Capsicum annuum HOM05D007466 ORTHO05D002463 1.7e-19 99.8 125 44.8
Potri.017G037600 Populus trichocarpa HOM05D007466 ORTHO05D002463 2.2e-19 99.4 119 41.2
Ciclev10017724m.g Citrus clementina HOM05D007466 ORTHO05D002463 3.8e-19 98.6 124 42.7
Psat2g121080 Pisum sativum HOM05D007466 ORTHO05D002463 4.9e-19 98.2 111 45.9
QL08p033690 Quercus lobata HOM05D007466 ORTHO05D002463 4.9e-19 98.2 119 43.7
Sabra17G0024500 Salix brachista HOM05D007466 ORTHO05D002463 6.4e-19 97.8 119 42.0
Cfa014433 Carpinus fangiana HOM05D007466 ORTHO05D002463 8.4e-19 97.4 119 41.2
Haze_12891 Corylus avellana HOM05D007466 ORTHO05D002463 1.1e-18 97.1 112 43.8
FvH4_6g26390 Fragaria vesca HOM05D007466 ORTHO05D002463 1.1e-18 97.1 111 42.3
Psat5g265200 Pisum sativum HOM05D007466 ORTHO05D002463 1.9e-18 96.3 110 45.5
Sed0014854 Sechium edule HOM05D007466 ORTHO05D002463 3.2e-18 95.5 124 42.7
unitig_578.g16773 Utricularia gibba HOM05D007466 ORTHO05D002463 3.2e-18 95.5 128 41.4
Atru.chr6.3156 Acer truncatum HOM05D007466 ORTHO05D002463 4.2e-18 95.1 112 44.6
Gorai.008G172300 Gossypium raimondii HOM05D007466 ORTHO05D002463 4.2e-18 95.1 124 43.5
Gohir.D12G159200 Gossypium hirsutum HOM05D007466 ORTHO05D002463 5.4e-18 94.7 124 43.5
Gohir.A12G156100 Gossypium hirsutum HOM05D007466 ORTHO05D002463 7.1e-18 94.4 124 43.5
CSS0024645 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 9.2e-18 94.0 108 44.4
CiPaw.04G117300 Carya illinoinensis HOM05D007466 ORTHO05D002463 2.7e-17 92.4 112 43.8
Thecc.02G312400 Theobroma cacao HOM05D007466 ORTHO05D002463 2.7e-17 92.4 111 43.2
RcHm_v2.0_Chr2g0126881 Rosa chinensis HOM05D007466 ORTHO05D002463 3.5e-17 92.0 105 42.9
Aqoxy4G01992 Aquilegia oxysepala HOM05D007466 ORTHO05D002463 4.6e-17 91.7 120 39.2
FAN09G4112 Fragaria x ananassa HOM05D007466 ORTHO05D002463 6.0e-17 91.3 124 38.7
FAN05G5573 Fragaria x ananassa HOM05D007466 ORTHO05D002463 7.8e-17 90.9 124 38.7
FAN02G3170 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.3e-16 90.1 108 40.7
FAN05G5633 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.3e-16 90.1 111 39.6
FAN14G1602 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.3e-16 90.1 124 37.9
Rhsim06G0158700 Rhododendron simsii HOM05D007466 ORTHO05D002463 1.3e-16 90.1 125 40.8
RcHm_v2.0_Chr2g0159951 Rosa chinensis HOM05D007466 ORTHO05D002463 1.3e-16 90.1 124 39.5
THA.LOC104801548 Tarenaya hassleriana HOM05D007466 ORTHO05D002463 2.3e-16 89.4 111 40.5
FvH4_6g43480 Fragaria vesca HOM05D007466 ORTHO05D002463 3.9e-16 88.6 124 37.1
ClCG02G001800 Citrullus lanatus HOM05D007466 ORTHO05D002463 5.1e-16 88.2 123 40.7
A05p13150 Brassica napus HOM05D007466 ORTHO05D002463 6.6e-16 87.8 121 38.8
SHI54719 Sapria himalayana HOM05D007466 ORTHO05D002463 6.6e-16 87.8 112 40.2
C04p17280 Brassica napus HOM05D007466 ORTHO05D002463 1.9e-15 86.3 121 38.0
FAN02G1346 Fragaria x ananassa HOM05D007466 ORTHO05D002463 2.5e-15 85.9 123 37.4
BraA05t20253Z Brassica rapa HOM05D007466 ORTHO05D002463 5.6e-15 84.7 109 40.4
BcaC02g11328 Brassica carinata HOM05D007466 ORTHO05D002463 1.3e-14 83.6 109 39.4
BolC4t23280H Brassica oleracea HOM05D007466 ORTHO05D002463 1.6e-14 83.2 109 39.4
MELO3C018805.2 Cucumis melo HOM05D007466 ORTHO05D002463 2.1e-14 82.8 125 38.4
Prupe.3G219500 Prunus persica HOM05D007466 ORTHO05D002463 2.1e-14 82.8 112 40.2
BcaB02g10474 Brassica carinata HOM05D007466 ORTHO05D002463 3.6e-14 82.0 109 40.4
CARHR126170 Cardamine hirsuta HOM05D007466 ORTHO05D002463 3.6e-14 82.0 109 41.3
Carub.0004s1370 Capsella rubella HOM05D007466 ORTHO05D002463 4.8e-14 81.6 121 37.2
PSO675G1565 Papaver somniferum HOM05D007466 ORTHO05D002463 4.8e-14 81.6 120 38.3
PSO541G5792 Papaver somniferum HOM05D007466 ORTHO05D002463 8.1e-14 80.9 112 39.3
Sp4g14720 Schrenkiella parvula HOM05D007466 ORTHO05D002463 8.1e-14 80.9 109 40.4
CsaV3_7G003740 Cucumis sativus L. HOM05D007466 ORTHO05D002463 1.1e-13 80.5 123 37.4
Thhalv10017634m.g Eutrema salsugineum HOM05D007466 ORTHO05D002463 1.1e-13 80.5 109 39.4
AL125U10032 Arabidopsis lyrata HOM05D007466 ORTHO05D002463 1.4e-13 80.1 109 40.4
AL4G27734 Arabidopsis lyrata HOM05D007466 ORTHO05D002463 1.8e-13 79.7 109 40.4
AT2G32350 Arabidopsis thaliana HOM05D007466 ORTHO05D002463 1.8e-13 79.7 109 40.4
Lj3g0019012 Lotus japonicus HOM05D007466 ORTHO05D002463 1.8e-13 79.7 103 40.8
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 9.0e-13 77.4 111 36.9
Actinidia32076 Actinidia chinensis HOM05D007466 ORTHO05D002463 3.4e-12 75.5 76 50.0
CANSAT64G0630 Cannabis sativa HOM05D007466 ORTHO05D002463 3.8e-11 72.0 111 40.5
Thhalv10002923m.g Eutrema salsugineum HOM05D007466 ORTHO05D002463 4.2e-10 68.6 97 40.2
CDE05G0337 Ceratophyllum demersum HOM05D007466 ORTHO05D002463 1.0e-08 63.9 124 32.3
Migut.H01135 Erythranthe guttata HOM05D007466 ORTHO05D002463 8.7e-08 60.8 34 88.2
Rhsim06G0158800 Rhododendron simsii HOM05D007466 ORTHO05D002463 1.5e-07 60.1 75 42.7
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 2.5e-07 59.3 73 45.2
Dinv02746 Davidia involucrata HOM05D007466 ORTHO05D002463 2.1e-06 56.2 105 34.3
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 2.8e-06 55.8 110 31.8


User provided reference genes

Program Settings