Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 0.0e+00 1147.9 571 100.0
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 0.0e+00 1139.0 571 99.3
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 6.3e-236 820.8 580 73.8
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 8.2e-236 820.5 581 73.7
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 8.8e-230 800.4 588 73.1
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.7e-228 796.2 592 71.1
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 5.9e-226 787.7 579 70.8
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 4.2e-224 781.6 598 70.7
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 2.6e-221 772.3 597 70.9
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.0e-218 762.7 575 70.6
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 4.4e-205 718.4 586 67.4
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 2.2e-204 716.1 626 63.4
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 2.4e-203 712.6 600 65.0
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 7.0e-203 711.1 600 64.7
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 4.5e-202 708.4 598 64.9
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 5.0e-201 704.9 528 69.5
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.1e-200 703.7 602 64.1
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 1.9e-200 703.0 615 62.6
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.3e-200 701.8 605 64.3
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 5.6e-200 701.4 597 65.3
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.2e-199 700.3 536 68.8
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 1.2e-199 700.3 444 79.3
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 6.1e-199 698.0 594 64.1
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 8.0e-199 697.6 512 70.9
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.4e-198 696.8 536 68.3
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 4.4e-197 691.8 590 64.2
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 5.8e-197 691.4 517 68.9
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 5.8e-197 691.4 563 66.8
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.3e-196 690.3 508 69.3
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.7e-196 689.9 534 68.5
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.2e-196 689.5 615 62.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.2e-196 689.5 606 63.4
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 4.9e-196 688.3 591 63.6
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.1e-195 687.2 516 69.4
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.4e-195 686.8 412 81.6
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.4e-195 686.0 500 72.0
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.4e-195 686.0 520 67.5
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 4.1e-195 685.3 516 68.2
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 5.4e-195 684.9 613 62.3
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.6e-194 683.3 523 68.5
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 3.5e-194 682.2 584 62.7
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 3.5e-194 682.2 583 63.1
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 4.6e-194 681.8 417 80.3
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.7e-193 679.9 506 69.4
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.7e-193 679.9 510 70.2
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.3e-193 679.5 504 69.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 2.3e-193 679.5 517 68.1
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 1.5e-192 676.8 482 72.0
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 4.3e-192 675.2 606 62.0
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 4.3e-192 675.2 594 61.6
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 7.3e-192 674.5 535 67.1
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 9.5e-192 674.1 585 63.4
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.6e-191 673.3 595 62.5
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.8e-191 672.5 426 78.6
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 6.2e-191 671.4 617 60.8
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 8.0e-191 671.0 546 65.9
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 8.0e-191 671.0 601 62.1
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 2.3e-190 669.5 604 61.8
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 3.1e-190 669.1 584 63.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.8e-190 667.9 519 66.5
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.2e-189 667.2 524 65.8
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.5e-189 666.8 600 62.0
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.5e-189 666.8 586 62.5
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 4.4e-189 665.2 510 67.5
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 4.4e-189 665.2 596 61.9
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 7.5e-189 664.5 602 61.0
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 7.5e-189 664.5 580 63.1
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 7.5e-189 664.5 596 61.7
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 9.8e-189 664.1 431 76.3
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 1.3e-188 663.7 412 79.1
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.7e-188 663.3 508 67.9
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 6.4e-188 661.4 424 77.6
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 8.3e-188 661.0 593 63.4
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 8.3e-188 661.0 404 80.2
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 1.1e-187 660.6 599 62.6
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.4e-187 660.2 594 60.9
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.4e-187 660.2 611 60.4
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.4e-187 660.2 424 76.4
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 3.2e-187 659.1 412 79.6
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 4.1e-187 658.7 590 61.2
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 5.4e-187 658.3 403 80.1
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.4e-187 658.3 594 61.6
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.2e-186 657.1 407 78.1
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.2e-186 657.1 466 74.2
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 1.6e-186 656.8 464 72.2
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.1e-186 656.4 602 60.0
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.5e-186 655.6 404 79.5
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 4.6e-186 655.2 619 60.4
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.0e-186 654.8 587 61.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.8e-186 654.4 598 60.2
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.3e-185 653.7 551 64.6
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.3e-185 653.7 449 73.9
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.0e-185 652.5 599 60.3
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 6.6e-185 651.4 463 72.6
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 8.6e-185 651.0 604 59.8
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.1e-184 650.6 404 80.0
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.9e-184 649.8 484 69.4
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 3.6e-183 645.6 506 67.4
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 8.1e-183 644.4 422 76.1
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.1e-182 644.0 517 65.4
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.8e-182 643.3 506 67.0
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 1.8e-182 643.3 511 66.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.1e-182 642.5 489 68.3
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 3.1e-182 642.5 582 61.5
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 6.8e-182 641.3 582 60.0
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 8.9e-182 641.0 506 67.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 8.9e-182 641.0 562 62.3
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.5e-181 640.2 598 58.7
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.6e-181 639.4 457 69.8
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.4e-181 639.0 492 66.9
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 4.4e-181 638.6 598 60.5
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.8e-181 638.3 619 57.7
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 5.8e-181 638.3 578 60.7
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 2.2e-180 636.3 598 60.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 8.3e-180 634.4 599 59.8
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.3e-180 634.4 478 68.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 5.4e-179 631.7 514 64.4
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 5.4e-179 631.7 583 61.6
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 7.1e-179 631.3 601 59.1
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.2e-178 630.6 516 64.1
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.6e-178 630.2 449 70.6
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.3e-177 627.1 582 60.1
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 3.0e-177 625.9 439 72.0
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 3.9e-177 625.5 442 72.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 3.9e-177 625.5 442 72.4
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 1.1e-176 624.0 602 57.8
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.3e-176 622.5 457 70.5
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.3e-176 622.5 457 70.5
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.3e-176 622.5 457 70.5
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 2.8e-175 619.4 611 57.4
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 1.4e-174 617.1 385 78.4
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 1.1e-171 607.4 592 58.3
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.9e-171 606.7 355 82.3
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-160 570.5 361 78.1
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.9e-160 570.1 384 71.6
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.7e-156 557.0 587 56.6
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.5e-147 526.6 421 63.4
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.5e-147 526.6 341 72.7
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 1.6e-146 523.9 409 65.0
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.2e-140 503.4 446 59.4
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 9.0e-134 481.5 308 72.4
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 5.9e-133 478.8 345 67.8
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.5e-131 473.4 374 65.5
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 5.5e-99 365.9 209 80.9
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 4.0e-97 359.8 397 49.6
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 7.7e-93 345.5 197 80.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.0e-88 330.9 385 53.0
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 7.3e-83 312.4 180 79.4
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.9e-76 290.0 159 83.0
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 9.5e-75 285.4 156 83.3
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 9.5e-75 285.4 156 83.3
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 8.9e-73 278.9 217 65.9
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.5e-67 261.5 449 38.1
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 4.9e-63 246.5 358 38.3
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.9e-56 222.2 153 73.9
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 3.8e-55 220.3 302 39.1
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.9e-48 195.7 127 78.7
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 8.4e-47 192.6 265 38.9
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 5.3e-41 173.3 109 75.2
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 6.9e-41 172.9 189 52.4
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 4.3e-35 153.7 110 66.4
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 6.2e-34 149.8 222 49.1
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.0e-33 146.0 88 75.0
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 2.6e-32 144.4 141 55.3
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 5.8e-32 143.3 215 36.7
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.4e-30 138.7 83 75.9
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 3.5e-29 134.0 83 72.3
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.0e-28 132.5 100 69.0
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 4.3e-27 127.1 127 51.2
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.2e-21 109.0 121 51.2
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 3.7e-18 97.4 100 54.0
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.4e-14 85.5 92 52.2
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 2.7e-13 81.3 173 33.5
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.5e-11 75.5 44 79.5
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 2.0e-11 75.1 111 40.5
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 7.7e-08 63.2 32 84.4
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 7.2e-06 56.6 84 40.5


User provided reference genes

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