Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 8.0e-52 206.8 106 100.0
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 2.6e-42 175.3 106 83.0
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 2.7e-39 165.2 105 80.0
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.2e-36 156.4 107 76.6
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.8e-36 155.2 107 75.7
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 3.4e-34 148.3 107 72.0
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 4.4e-34 147.9 106 70.8
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 2.9e-33 145.2 104 72.1
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 1.1e-32 143.3 104 70.2
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 2.4e-32 142.1 106 67.9
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 2.4e-32 142.1 107 70.1
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 2.4e-32 142.1 106 68.9
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 7.0e-32 140.6 104 66.3
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 9.2e-32 140.2 105 67.6
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 9.2e-32 140.2 105 67.6
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.2e-31 139.8 103 68.9
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 2.0e-31 139.0 106 64.2
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.7e-31 138.7 103 68.0
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 2.7e-31 138.7 103 68.0
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 3.5e-31 138.3 104 68.3
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 7.8e-31 137.1 105 65.7
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 7.8e-31 137.1 107 69.2
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 1.3e-30 136.3 104 67.3
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 2.3e-30 135.6 106 67.0
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 3.9e-30 134.8 89 74.2
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 3.9e-30 134.8 106 67.0
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 3.9e-30 134.8 105 65.7
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.9e-30 134.8 105 65.7
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.0e-30 134.4 105 65.7
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 5.0e-30 134.4 105 65.7
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 5.0e-30 134.4 89 74.2
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 6.6e-30 134.0 107 68.2
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 8.6e-30 133.7 106 65.1
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 8.6e-30 133.7 109 66.1
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 1.1e-29 133.3 106 64.2
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.1e-29 133.3 106 64.2
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.1e-29 133.3 105 64.8
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.1e-29 133.3 106 65.1
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 1.5e-29 132.9 107 67.3
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 1.9e-29 132.5 104 67.3
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.9e-29 132.5 107 64.5
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 2.5e-29 132.1 107 66.4
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 4.3e-29 131.3 105 61.9
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 4.3e-29 131.3 105 63.8
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 63.6
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 5.6e-29 131.0 105 62.9
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 7.3e-29 130.6 94 67.0
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 7.3e-29 130.6 108 65.7
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 7.3e-29 130.6 106 62.3
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 9.5e-29 130.2 105 61.9
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.2e-28 129.8 107 62.6
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.2e-28 129.8 106 64.2
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.1e-28 129.0 106 63.2
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 2.1e-28 129.0 104 65.4
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 2.1e-28 129.0 106 67.0
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 2.1e-28 129.0 89 70.8
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 2.1e-28 129.0 105 62.9
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 2.8e-28 128.6 107 61.7
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 3.6e-28 128.3 107 63.6
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 4.7e-28 127.9 107 63.6
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 6.2e-28 127.5 106 61.3
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 6.2e-28 127.5 106 65.1
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 1.0e-27 126.7 105 62.9
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 1.0e-27 126.7 105 62.9
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.0e-27 126.7 106 65.1
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 1.0e-27 126.7 106 64.2
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 1.4e-27 126.3 106 63.2
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 1.4e-27 126.3 105 61.9
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 1.4e-27 126.3 104 62.5
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 1.8e-27 125.9 106 59.4
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 3.1e-27 125.2 106 60.4
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 4.0e-27 124.8 93 71.0
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 6.8e-27 124.0 119 57.1
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 1.5e-26 122.9 105 59.0
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 2.0e-26 122.5 105 58.1
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.0e-26 122.5 107 61.7
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 2.6e-26 122.1 91 62.6
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 2.6e-26 122.1 125 56.8
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 3.4e-26 121.7 106 60.4
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 3.4e-26 121.7 106 61.3
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 7.5e-26 120.6 105 60.0
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 7.5e-26 120.6 105 60.0
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 7.5e-26 120.6 93 66.7
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 9.8e-26 120.2 105 54.3
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 1.7e-25 119.4 109 59.6
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 2.9e-25 118.6 93 67.7
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 3.7e-25 118.2 106 57.5
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 4.9e-25 117.9 86 67.4
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 4.9e-25 117.9 105 57.1
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 6.4e-25 117.5 89 64.0
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 8.3e-25 117.1 105 59.0
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 1.1e-24 116.7 103 57.3
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.4e-24 116.3 108 60.2
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.9e-24 115.9 106 56.6
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 1.9e-24 115.9 105 56.2
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 2.4e-24 115.5 106 57.5
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 2.4e-24 115.5 106 57.5
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 2.4e-24 115.5 106 57.5
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 3.2e-24 115.2 106 56.6
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 3.2e-24 115.2 106 53.8
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 4.1e-24 114.8 106 54.7
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 4.1e-24 114.8 127 53.5
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 4.1e-24 114.8 106 57.5
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 5.4e-24 114.4 106 56.6
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 7.0e-24 114.0 106 55.7
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 7.0e-24 114.0 106 54.7
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 9.2e-24 113.6 93 62.4
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 1.2e-23 113.2 106 55.7
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 1.2e-23 113.2 106 55.7
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 2.0e-23 112.5 106 54.7
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 2.0e-23 112.5 92 62.0
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 2.7e-23 112.1 83 63.9
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 3.5e-23 111.7 106 56.6
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 4.6e-23 111.3 106 54.7
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 6.0e-23 110.9 106 55.7
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 7.8e-23 110.5 97 58.8
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 7.8e-23 110.5 100 55.0
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 3.9e-22 108.2 106 53.8
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 1.1e-21 106.7 107 51.4
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 1.5e-21 106.3 87 60.9
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 2.5e-21 105.5 90 55.6
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 2.5e-21 105.5 89 59.6
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 2.5e-21 105.5 89 59.6
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 2.5e-21 105.5 108 55.6
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 5.6e-21 104.4 108 56.5
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 1.6e-20 102.8 88 59.1
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 4.7e-20 101.3 90 53.3
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 1.4e-19 99.8 105 50.5
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.4e-19 99.8 87 54.0
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 1.7e-17 92.8 74 64.9
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 1.9e-16 89.4 96 47.9
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 2.4e-16 89.0 84 54.8
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 4.1e-16 88.2 74 63.5
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 1.6e-15 86.3 74 62.2
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.7e-14 82.8 75 64.0
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 3.0e-14 82.0 103 43.7
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 7.3e-13 77.4 54 74.1
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 1.2e-12 76.6 71 60.6
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.6e-12 76.3 63 63.5
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 8.1e-12 73.9 74 56.8
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.1e-11 73.6 60 58.3
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 8.9e-11 70.5 72 56.9
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 1.5e-10 69.7 64 56.2
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 2.9e-09 65.5 70 55.7
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 1.4e-08 63.2 83 50.6
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 9.2e-08 60.5 67 46.3
Solyc11g065610.1 Solanum lycopersicum HOM05D005271 ORTHO05D006072 6.6e-06 54.3 33 75.8


User provided reference genes

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