Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.3e-210 736.1 359 100.0
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 1.1e-129 467.2 394 63.2
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 2.4e-124 449.5 391 63.2
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 4.2e-121 438.7 398 61.6
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 1.8e-119 433.3 391 59.1
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 4.5e-115 418.7 397 57.7
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 3.2e-113 412.5 389 57.3
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 2.9e-98 362.8 398 51.3
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 8.6e-98 361.3 395 49.6
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 8.6e-98 361.3 395 49.6
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 7.3e-97 358.2 395 49.4
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 8.9e-95 351.3 405 48.1
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 1.7e-93 347.1 400 48.5
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 1.1e-92 344.4 387 49.1
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 1.4e-92 344.0 403 46.9
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 5.4e-92 342.0 393 48.1
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 4.6e-91 339.0 384 49.2
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.7e-90 337.0 405 46.2
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 5.6e-89 332.0 383 48.3
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 2.8e-88 329.7 389 47.3
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 4.0e-87 325.9 386 47.2
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 1.2e-86 324.3 391 46.3
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 2.0e-86 323.6 397 47.4
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 2.0e-86 323.6 389 46.3
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 3.4e-86 322.8 398 46.7
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 3.4e-86 322.8 391 47.1
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 1.3e-85 320.9 386 48.2
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 3.7e-85 319.3 395 46.3
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 3.7e-85 319.3 394 48.0
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 3.7e-85 319.3 398 47.0
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 6.4e-85 318.5 401 46.4
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 8.3e-85 318.2 409 44.7
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 1.1e-84 317.8 391 45.8
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 1.1e-84 317.8 395 45.3
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.9e-84 317.0 400 46.8
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 2.4e-84 316.6 383 47.5
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 7.0e-84 315.1 391 45.3
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 7.0e-84 315.1 402 45.0
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 6.0e-83 312.0 395 45.6
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 1.0e-82 311.2 397 47.1
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 3.0e-82 309.7 397 45.8
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 3.0e-82 309.7 422 44.3
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 6.6e-82 308.5 395 44.8
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 8.6e-82 308.1 388 45.6
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 1.9e-81 307.0 397 44.3
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 1.9e-81 307.0 391 45.3
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 1.9e-81 307.0 391 45.3
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 1.9e-81 307.0 406 43.6
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 2.5e-81 306.6 391 45.3
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 3.3e-81 306.2 395 44.3
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 7.3e-81 305.1 399 44.1
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 9.5e-81 304.7 391 45.0
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 9.5e-81 304.7 391 45.0
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 9.5e-81 304.7 398 45.0
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 9.5e-81 304.7 397 43.8
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 4.7e-80 302.4 397 43.6
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 4.7e-80 302.4 392 45.2
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 6.2e-80 302.0 394 44.9
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 6.2e-80 302.0 392 46.7
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 8.1e-80 301.6 407 42.3
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.1e-79 301.2 403 43.7
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.1e-79 301.2 390 44.9
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 3.1e-79 299.7 392 45.4
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 1.2e-78 297.7 389 44.0
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.5e-78 297.4 382 46.9
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 2.0e-78 297.0 400 43.2
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 3.4e-78 296.2 400 42.8
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 5.8e-78 295.4 400 42.5
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 5.8e-78 295.4 400 42.5
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 7.5e-78 295.0 389 42.2
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.3e-77 294.3 400 42.2
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 1.1e-76 291.2 262 59.2
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 1.6e-75 287.3 370 46.5
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 2.7e-75 286.6 406 43.3
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 2.7e-75 286.6 406 43.3
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 4.6e-75 285.8 398 43.7
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 6.0e-75 285.4 400 43.5
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 1.3e-74 284.3 387 42.1
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 1.9e-73 280.4 404 42.6
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 4.3e-73 279.3 396 41.4
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 1.2e-72 277.7 392 42.1
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 3.6e-72 276.2 398 43.0
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 8.1e-72 275.0 387 41.1
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 9.9e-70 268.1 390 40.0
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 6.4e-69 265.4 313 48.9
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 3.2e-68 263.1 382 42.1
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 5.4e-68 262.3 369 43.4
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 1.6e-67 260.8 390 41.0
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 3.9e-66 256.1 368 42.7
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 8.7e-66 255.0 306 48.4
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 9.9e-62 241.5 295 46.4
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 1.0e-58 231.5 404 39.1
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 2.4e-55 220.3 358 42.5
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 4.0e-55 219.5 388 37.4
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 7.1e-52 208.8 319 39.8
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 4.6e-51 206.1 272 45.2
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 1.5e-46 191.0 408 34.6
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 1.9e-44 184.1 401 33.4
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 2.1e-43 180.6 358 36.6
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 1.8e-39 167.5 327 34.3
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 8.4e-37 158.7 169 47.3
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 1.1e-36 158.3 99 73.7
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 5.5e-36 156.0 357 33.6
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 7.1e-36 155.6 215 44.2
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 2.1e-35 154.1 227 40.1
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 1.9e-33 147.5 164 45.7
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 2.0e-30 137.5 99 66.7
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 8.5e-29 132.1 390 28.2
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 2.4e-23 114.0 97 58.8
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.2e-22 111.7 96 60.4
MSTRG.25314 Avicennia marina HOM05D006114 ORTHO05D007609 1.5e-22 111.3 72 75.0
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 7.2e-20 102.4 182 37.9
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 2.3e-18 97.4 199 39.2
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 3.3e-17 93.6 89 52.8
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 6.3e-16 89.4 196 30.1
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 2.2e-13 80.9 67 59.7
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 3.8e-13 80.1 102 42.2
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 2.5e-12 77.4 93 43.0
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 2.7e-11 73.9 157 33.1
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 1.0e-10 72.0 66 53.0
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 1.1e-09 68.6 102 39.2
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 5.7e-09 66.2 145 33.1
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 9.7e-09 65.5 369 23.0
Pp3c25_9030 Physcomitrium patens HOM05D002809 ORTHO05D004939 2.2e-08 64.3 143 30.8
SEGI_04786 Sequoiadendron giganteum HOM05D003005 ORTHO05D026051 3.7e-08 63.5 145 30.3
Pp3c16_10660 Physcomitrium patens HOM05D002809 ORTHO05D012113 5.3e-07 59.7 142 28.2
Pp3c26_600 Physcomitrium patens HOM05D003005 ORTHO05D006906 9.1e-07 58.9 141 31.9
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-06 58.5 46 54.3
Sc20g0003450 Simmondsia chinensis HOM05D006114 ORTHO05D007609 1.6e-06 58.2 45 57.8
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 2.0e-06 57.8 137 31.4
AagrBONN_evm.TU.Sc2ySwM_362.250 Anthoceros agrestis HOM05D008059 ORTHO05D009361 3.5e-06 57.0 181 26.5
Dinv44144 Davidia involucrata HOM05D000007 ORTHO05D000039 4.5e-06 56.6 138 27.5
PGR102G0169 Punica granatum HOM05D007753 ORTHO05D009385 4.5e-06 56.6 139 30.9
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 5.9e-06 56.2 145 27.6
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 7.7e-06 55.8 153 28.8


User provided reference genes

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