Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03213 Erythranthe guttata HOM05D005242 ORTHO05D006778 1.7e-67 259.2 134 100.0
SalBow6G1825 Salvia bowleyana HOM05D005242 ORTHO05D006778 6.2e-33 144.4 150 56.0
SGA_v2.0_scaffold19G08682 Striga asiatica HOM05D001302 ORTHO05D001107 2.2e-30 136.0 166 50.6
Oeu011949.1 Olea europaea HOM05D005242 ORTHO05D006778 2.9e-30 135.6 149 53.7
Cc10_g14420 Coffea canephora HOM05D005242 ORTHO05D006778 6.0e-28 127.9 150 51.3
Rhsim11G0083400 Rhododendron simsii HOM05D005242 ORTHO05D006778 1.0e-27 127.1 163 48.5
CiPaw.16G012200 Carya illinoinensis HOM05D005242 ORTHO05D006778 1.3e-27 126.7 170 48.2
CAN.G268.26 Capsicum annuum HOM05D005242 ORTHO05D006778 1.7e-27 126.3 160 47.5
Peaxi162Scf00599g00049 Petunia axillaris HOM05D005242 ORTHO05D006778 1.7e-27 126.3 145 51.0
PGSC0003DMG400024099 Solanum tuberosum HOM05D005242 ORTHO05D006778 8.6e-27 124.0 174 45.4
Sopen04g027460 Solanum pennellii HOM05D005242 ORTHO05D006778 5.6e-26 121.3 160 46.9
Dinv25870 Davidia involucrata HOM05D005242 ORTHO05D006778 2.1e-25 119.4 144 50.7
Nitab4.5_0001062g0060 Nicotiana tabacum HOM05D005242 ORTHO05D006778 2.1e-25 119.4 154 46.1
TWI60G0101 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 2.1e-25 119.4 144 49.3
Peaxi162Scf01294g00121 Petunia axillaris HOM05D005242 ORTHO05D006778 2.8e-25 119.0 163 47.2
Solyc04g071490.3 Solanum lycopersicum HOM05D005242 ORTHO05D006778 2.8e-25 119.0 160 46.2
vmacro01456 Vaccinium macrocarpon HOM05D005242 ORTHO05D006778 4.7e-25 118.2 166 45.8
Nn5g28757 Nelumbo nucifera HOM05D005242 ORTHO05D006778 6.2e-25 117.9 153 47.1
QL02p039039 Quercus lobata HOM05D005242 ORTHO05D006778 8.1e-25 117.5 158 46.8
MD05G1026800 Malus domestica HOM05D005242 ORTHO05D006778 1.1e-24 117.1 160 44.4
Nitab4.5_0010749g0010 Nicotiana tabacum HOM05D005242 ORTHO05D006778 3.1e-24 115.5 156 46.2
COL.COLO4_08566 Corchorus olitorius HOM05D005242 ORTHO05D006778 4.0e-24 115.2 150 47.3
Haze_17757 Corylus avellana HOM05D005242 ORTHO05D006778 4.0e-24 115.2 150 45.3
MD10G1026100 Malus domestica HOM05D005242 ORTHO05D006778 5.2e-24 114.8 160 43.8
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea HOM05D005242 ORTHO05D006778 1.2e-23 113.6 142 47.9
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea HOM05D005242 ORTHO05D006778 1.2e-23 113.6 142 47.9
CANSAT25G1562 Cannabis sativa HOM05D005242 ORTHO05D006778 1.5e-23 113.2 150 45.3
Lj5g0003985 Lotus japonicus HOM05D005242 ORTHO05D006778 1.5e-23 113.2 168 46.4
arahy.Tifrunner.gnm1.ann1.661UAU Arachis hypogaea HOM05D005242 ORTHO05D006778 2.6e-23 112.5 165 43.0
CSS0002508 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 2.6e-23 112.5 136 49.3
Lalb_Chr21g0305491 Lupinus albus HOM05D005242 ORTHO05D006778 2.6e-23 112.5 145 49.0
Manes.02G179900 Manihot esculenta HOM05D005242 ORTHO05D006778 2.6e-23 112.5 165 42.4
Psat6g192600 Pisum sativum HOM05D005242 ORTHO05D006778 3.4e-23 112.1 160 48.1
arahy.Tifrunner.gnm1.ann1.3DXP20 Arachis hypogaea HOM05D005242 ORTHO05D006778 4.4e-23 111.7 165 42.4
CSS0020035 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 4.4e-23 111.7 136 49.3
DCAR_001139 Daucus carota HOM05D005242 ORTHO05D006778 1.7e-22 109.8 151 43.0
CiPaw.15G015900 Carya illinoinensis HOM05D005242 ORTHO05D006778 2.2e-22 109.4 170 44.1
Cfa018319 Carpinus fangiana HOM05D005242 ORTHO05D006778 2.9e-22 109.0 144 45.1
Duzib041G0461 Durio zibethinus HOM05D005242 ORTHO05D006778 3.7e-22 108.6 164 43.9
CARHR070310 Cardamine hirsuta HOM05D005242 ORTHO05D006778 6.4e-22 107.8 145 47.6
Thecc.08G153500 Theobroma cacao HOM05D005242 ORTHO05D006778 8.3e-22 107.5 161 45.3
Actinidia29532 Actinidia chinensis HOM05D005242 ORTHO05D006778 1.4e-21 106.7 164 43.3
AT1G76780 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 1.4e-21 106.7 139 47.5
Aa31LG4G6850 Aethionema arabicum HOM05D005242 ORTHO05D006778 4.1e-21 105.1 154 45.5
Aqoxy5G02077 Aquilegia oxysepala HOM05D005242 ORTHO05D006778 4.1e-21 105.1 141 42.6
RcHm_v2.0_Chr6g0275301 Rosa chinensis HOM05D005242 ORTHO05D006778 4.1e-21 105.1 147 41.5
Carub.0002s2368 Capsella rubella HOM05D005242 ORTHO05D006778 5.4e-21 104.8 162 43.2
Actinidia17789 Actinidia chinensis HOM05D005242 ORTHO05D006778 7.1e-21 104.4 169 42.6
AT1G76770 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 7.1e-21 104.4 142 46.5
Potri.005G192700 Populus trichocarpa HOM05D005242 ORTHO05D006778 7.1e-21 104.4 146 43.8
Ciclev10003945m.g Citrus clementina HOM05D005242 ORTHO05D006778 1.6e-20 103.2 170 41.2
Eucgr.F02701 Eucalyptus grandis HOM05D005242 ORTHO05D006778 1.6e-20 103.2 145 42.8
Medtr1g098690 Medicago truncatula HOM05D005242 ORTHO05D006778 2.1e-20 102.8 169 44.4
PGR042G2442 Punica granatum HOM05D005242 ORTHO05D006778 2.1e-20 102.8 142 44.4
unitig_52.g17530 Utricularia gibba HOM05D005242 ORTHO05D006778 2.1e-20 102.8 200 38.5
Phvul.007G080300 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 2.7e-20 102.4 146 45.2
Sabra05G0147300 Salix brachista HOM05D005242 ORTHO05D006778 2.7e-20 102.4 163 42.3
TPR.G31185 Trifolium pratense HOM05D004559 ORTHO05D005283 2.7e-20 102.4 144 45.8
FAN24G0150 Fragaria x ananassa HOM05D005242 ORTHO05D006778 3.5e-20 102.1 147 40.8
A02p20890 Brassica napus HOM05D005242 ORTHO05D018625 4.6e-20 101.7 162 40.7
A07p42410 Brassica napus HOM05D005242 ORTHO05D006778 6.0e-20 101.3 140 46.4
AL2G36920 Arabidopsis lyrata HOM05D005242 ORTHO05D006778 7.8e-20 100.9 149 44.3
BraA02t07119Z Brassica rapa HOM05D005242 ORTHO05D006778 7.8e-20 100.9 144 43.8
CAN.G18.12 Capsicum annuum HOM05D005242 ORTHO05D006778 7.8e-20 100.9 155 43.2
FAN20G3127 Fragaria x ananassa HOM05D005242 ORTHO05D006778 7.8e-20 100.9 147 41.5
BraA02t07120Z Brassica rapa HOM05D005242 ORTHO05D018625 1.0e-19 100.5 144 43.1
Glyma.10G224400 Glycine max HOM05D005242 ORTHO05D006778 1.0e-19 100.5 156 44.2
FAN15G2695 Fragaria x ananassa HOM05D005242 ORTHO05D006778 1.3e-19 100.1 147 40.8
FAN27G0674 Fragaria x ananassa HOM05D005242 ORTHO05D006778 1.3e-19 100.1 147 40.8
BraA07t31767Z Brassica rapa HOM05D005242 ORTHO05D006778 1.7e-19 99.8 141 45.4
Prupe.8G031300 Prunus persica HOM05D005242 ORTHO05D006778 1.7e-19 99.8 187 38.0
Atru.chr13.2099 Acer truncatum HOM05D005242 ORTHO05D006778 3.0e-19 99.0 159 40.3
Lalb_Chr19g0130231 Lupinus albus HOM05D005242 ORTHO05D006778 3.0e-19 99.0 188 37.8
PSO447G0326 Papaver somniferum HOM05D005242 ORTHO05D006778 3.0e-19 99.0 143 42.0
Psat1g101840 Pisum sativum HOM05D005242 ORTHO05D006778 3.0e-19 99.0 145 44.1
Glyma.02G081300 Glycine max HOM05D005242 ORTHO05D006778 5.1e-19 98.2 163 40.5
Lj2g0024086 Lotus japonicus HOM05D005242 ORTHO05D006778 5.1e-19 98.2 158 42.4
Gorai.009G254600 Gossypium raimondii HOM05D005242 ORTHO05D006778 6.6e-19 97.8 142 43.7
A02p20880 Brassica napus HOM05D005242 ORTHO05D006778 8.6e-19 97.4 144 42.4
CSS0021128 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 8.6e-19 97.4 143 41.3
Gohir.A05G243801 Gossypium hirsutum HOM05D005242 ORTHO05D006778 8.6e-19 97.4 145 42.8
Glyma.16G166700 Glycine max HOM05D005242 ORTHO05D006778 1.1e-18 97.1 163 40.5
C02p32790 Brassica napus HOM05D005242 ORTHO05D006778 1.5e-18 96.7 144 42.4
Glyma.20G167400 Glycine max HOM05D005242 ORTHO05D006778 1.5e-18 96.7 139 46.0
Sc26g0002570 Simmondsia chinensis HOM05D005242 ORTHO05D006778 1.5e-18 96.7 144 42.4
BcaC03g15701 Brassica carinata HOM05D005242 ORTHO05D006778 1.9e-18 96.3 144 42.4
Potri.002G067700 Populus trichocarpa HOM05D005242 ORTHO05D006778 1.9e-18 96.3 164 38.4
BolC2t09420H Brassica oleracea HOM05D005242 ORTHO05D018625 3.3e-18 95.5 152 40.8
AUR62013591 Chenopodium quinoa HOM05D005242 ORTHO05D006778 3.3e-18 95.5 149 43.6
VMungo0720G2917 Vigna mungo HOM05D005242 ORTHO05D006778 3.3e-18 95.5 156 43.6
THA.LOC104813717 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 5.6e-18 94.7 169 39.6
PSO210G0022 Papaver somniferum HOM05D005242 ORTHO05D006778 7.3e-18 94.4 164 38.4
GSVIVG01034538001 Vitis vinifera HOM05D005242 ORTHO05D006778 7.3e-18 94.4 141 41.8
Medtr1246s0010 Medicago truncatula HOM05D005242 ORTHO05D006778 9.5e-18 94.0 155 43.2
AUR62026703 Chenopodium quinoa HOM05D005242 ORTHO05D006778 1.2e-17 93.6 161 40.4
C06p50980 Brassica napus HOM05D005242 ORTHO05D006778 1.6e-17 93.2 135 44.4
VMungo0464G2160 Vigna mungo HOM05D005242 ORTHO05D006778 1.6e-17 93.2 162 40.1
BolC6t40122H Brassica oleracea HOM05D005242 ORTHO05D006778 6.2e-17 91.3 133 44.4
ClCG09G010170 Citrullus lanatus HOM05D005242 ORTHO05D006778 4.0e-16 88.6 141 41.1
Cpa.g.sc21.205 Carica papaya HOM05D005242 ORTHO05D006778 5.2e-16 88.2 143 42.7
Aa31LG4G6840 Aethionema arabicum HOM05D005242 ORTHO05D006778 6.8e-16 87.8 132 42.4
PGSC0003DMG402010796 Solanum tuberosum HOM05D005242 ORTHO05D006778 4.4e-15 85.1 130 40.0
BcaC03g15702 Brassica carinata HOM05D005242 ORTHO05D018625 7.6e-15 84.3 142 42.3
Lsat_1_v5_gn_6_100581 Lactuca sativa HOM05D005242 ORTHO05D006778 7.6e-15 84.3 170 37.1
THA.LOC104812037 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 9.9e-15 84.0 145 39.3
EL10Ac1g01555 Beta vulgaris HOM05D005242 ORTHO05D006778 1.3e-14 83.6 171 36.3
Solyc12g056560.2 Solanum lycopersicum HOM05D005242 ORTHO05D006778 1.7e-14 83.2 130 40.0
Sopen12g029170 Solanum pennellii HOM05D005242 ORTHO05D006778 1.7e-14 83.2 130 40.0
DCAR_014441 Daucus carota HOM05D005242 ORTHO05D006778 2.2e-14 82.8 139 37.4
Sc02g0004040 Simmondsia chinensis HOM05D005242 ORTHO05D006778 3.2e-13 79.0 167 35.3
TWI60G1058 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 4.1e-13 78.6 57 66.7
Lsat_1_v5_gn_9_40940 Lactuca sativa HOM05D005242 ORTHO05D006778 9.2e-13 77.4 143 37.1
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 1.6e-12 76.6 136 41.9
HanXRQChr05g0161961 Helianthus annuus HOM05D005242 ORTHO05D006778 2.7e-12 75.9 146 32.9
CDE02G4447 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 6.0e-12 74.7 159 37.7
Sp5g31920 Schrenkiella parvula HOM05D005242 ORTHO05D006778 1.0e-11 73.9 59 64.4
Nitab4.5_0002487g0010 Nicotiana tabacum HOM05D001302 ORTHO05D001107 1.3e-11 73.6 65 61.5
Nitab4.5_0004505g0020 Nicotiana tabacum HOM05D005242 ORTHO05D006778 3.0e-11 72.4 65 58.5
Hund17437 Selenicereus undatus HOM05D005242 ORTHO05D006778 3.9e-11 72.0 77 53.2
Carub.0002s2369 Capsella rubella HOM05D005242 ORTHO05D018625 6.6e-11 71.2 85 51.8
FvH4_2g13660 Fragaria vesca HOM05D005242 ORTHO05D006778 1.6e-09 66.6 60 53.3
GSVIVG01034537001 Vitis vinifera HOM05D005242 ORTHO05D006778 4.7e-09 65.1 112 37.5
ATR0820G162 Amborella trichopoda HOM05D005242 ORTHO05D006778 6.2e-09 64.7 143 34.3
Sed0006497 Sechium edule HOM05D005242 ORTHO05D006778 1.4e-08 63.5 90 45.6
ECA246G4795 Erigeron canadensis HOM05D000028 ORTHO05D001176 4.0e-08 62.0 99 41.4
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 5.2e-08 61.6 59 55.9
Ca_27679_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 1.5e-07 60.1 75 48.0
Phvul.004G094700 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 1.5e-07 60.1 78 47.4
CDE08G0940 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 5.8e-07 58.2 155 34.8
Ca_10684_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 1.3e-06 57.0 81 48.1
ECA232G5004 Erigeron canadensis HOM05D005242 ORTHO05D006778 3.8e-06 55.5 72 41.7


User provided reference genes

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