Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 0.0e+00 1307.7 658 100.0
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 4.4e-193 678.7 723 53.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.0e-181 641.0 689 52.5
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 5.7e-148 528.9 653 48.1
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 1.2e-129 468.0 691 43.6
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 3.5e-129 466.5 704 42.6
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.7e-128 464.2 668 43.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 1.9e-127 460.7 686 43.6
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 1.9e-127 460.7 727 40.7
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 9.4e-127 458.4 680 43.7
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 8.0e-126 455.3 689 40.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 3.0e-125 453.4 688 42.7
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.5e-124 451.1 689 41.4
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.0e-124 450.7 688 42.6
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.8e-123 446.8 684 43.6
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.2e-121 441.4 650 42.5
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.3e-120 438.0 703 41.3
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 9.5e-119 431.8 699 40.6
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.6e-118 431.0 684 40.8
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 4.0e-117 426.4 629 42.3
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.2e-116 424.9 707 42.0
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 4.9e-115 419.5 684 41.4
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.4e-114 417.9 694 40.2
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 3.2e-114 416.8 672 39.7
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 9.2e-114 415.2 678 41.9
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 9.2e-114 415.2 701 39.4
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.6e-113 414.5 678 41.6
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 4.6e-113 412.9 699 39.5
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.0e-112 411.8 706 38.4
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 3.0e-112 410.2 679 41.1
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.1e-111 408.3 688 42.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 3.6e-110 403.3 686 40.4
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 1.8e-109 401.0 714 39.9
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 4.0e-109 399.8 682 38.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 4.0e-109 399.8 690 40.4
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 5.2e-109 399.4 681 37.7
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 8.3e-107 392.1 676 39.1
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.4e-106 391.3 682 38.4
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.9e-106 391.0 687 39.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.2e-105 388.3 653 39.5
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.6e-105 387.9 732 38.5
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.0e-105 387.5 678 38.2
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.7e-104 384.4 677 37.8
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 5.0e-104 382.9 686 38.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 3.3e-103 380.2 685 38.8
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 2.3e-101 374.0 558 42.8
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.5e-100 371.3 516 43.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.6e-100 370.5 695 36.7
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 7.5e-100 369.0 696 37.5
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 9.8e-100 368.6 491 46.2
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 1.3e-99 368.2 669 39.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 3.7e-99 366.7 643 39.3
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.1e-95 355.1 551 41.9
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 1.2e-94 351.7 695 34.8
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.1e-93 347.1 525 44.0
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.2e-92 345.1 680 35.1
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 2.0e-92 344.4 502 43.4
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 7.6e-92 342.4 471 42.7
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.7e-91 341.3 539 43.0
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 6.0e-89 332.8 654 34.3
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 1.1e-87 328.6 658 33.7
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.1e-87 328.6 661 33.9
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 4.3e-87 326.6 676 35.9
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 9.6e-87 325.5 667 33.4
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 3.6e-86 323.6 663 38.3
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 8.1e-86 322.4 481 41.2
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 2.2e-83 314.3 703 34.9
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.2e-81 308.5 708 33.9
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 6.0e-81 306.2 669 35.9
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.1e-79 302.0 651 33.8
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.3e-78 298.5 525 40.0
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.1e-78 297.7 660 33.5
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.1e-78 297.7 495 39.2
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 4.0e-77 293.5 399 43.6
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 2.7e-73 280.8 677 31.5
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 3.9e-72 276.9 752 31.5
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 6.7e-72 276.2 668 31.4
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.1e-69 268.9 335 49.0
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.9e-69 266.2 548 33.8
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 9.9e-68 262.3 385 39.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 6.4e-67 259.6 475 34.9
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.2e-66 257.3 483 35.4
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 5.5e-66 256.5 383 43.9
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 7.1e-66 256.1 370 45.1
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 9.3e-66 255.8 479 35.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 4.5e-60 236.9 448 37.7
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.6e-57 228.4 386 40.4
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.5e-55 221.9 350 39.7
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 3.3e-55 220.7 328 39.9
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.2e-50 204.1 293 43.0
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 2.3e-48 198.0 200 52.5
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.2e-46 191.4 383 36.3
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.8e-45 188.3 262 44.3
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 9.1e-45 186.0 381 36.2
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 5.5e-42 176.8 206 46.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 6.1e-41 173.3 365 34.0
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 6.7e-40 169.9 335 32.5
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 8.8e-40 169.5 186 50.5
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.6e-39 167.9 323 35.6
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.7e-38 164.1 291 36.1
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 5.0e-35 153.7 245 40.0
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 6.5e-35 153.3 297 36.0
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.6e-33 147.5 437 27.2
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.7e-31 139.4 249 37.8
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.1e-29 136.0 259 35.5
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.0e-28 131.7 271 33.2
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.5e-26 123.6 121 57.0
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.6e-25 120.9 271 36.2
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 3.0e-16 91.3 219 38.8
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 5.7e-15 87.0 131 40.5
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.0e-11 73.9 113 43.4
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 1.6e-09 68.9 52 63.5
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 3.6e-09 67.8 154 35.1
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.8e-08 65.5 104 40.4
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 5.7e-07 60.5 572 22.6
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 7.5e-07 60.1 176 29.5
CBR_g16883 Chara braunii HOM05D004492 ORTHO05D001303 2.8e-06 58.2 284 25.0


User provided reference genes

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