Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 9.1e-108 393.7 209 100.0
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 7.7e-99 364.0 213 86.9
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 2.2e-21 106.7 316 30.1
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 1.2e-19 100.9 342 28.1
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 6.7e-18 95.1 347 27.1
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 3.3e-17 92.8 356 30.6
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 3.3e-17 92.8 301 28.9
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 2.1e-16 90.1 293 33.4
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 8.2e-16 88.2 230 32.6
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 1.4e-15 87.4 335 26.0
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 1.8e-15 87.0 322 27.0
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 2.4e-15 86.7 311 29.3
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 5.3e-15 85.5 301 27.6
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 9.0e-15 84.7 225 31.6
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.5e-14 84.0 225 31.1
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 2.6e-14 83.2 309 27.5
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 7.6e-14 81.6 322 26.1
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.2e-13 80.1 312 28.5
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 2.9e-13 79.7 209 31.6
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 8.4e-13 78.2 237 30.4
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 1.4e-12 77.4 234 29.5
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 2.5e-12 76.6 311 27.3
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.2e-12 76.3 285 25.3
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 4.2e-12 75.9 324 29.9
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 9.3e-12 74.7 325 25.8
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 9.3e-12 74.7 297 30.6
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 1.2e-11 74.3 302 30.1
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 1.6e-11 73.9 163 35.6
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 2.7e-11 73.2 293 30.4
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 4.6e-11 72.4 310 25.5
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.6e-11 72.4 331 29.6
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 4.6e-11 72.4 301 25.6
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 7.9e-11 71.6 331 27.2
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 7.9e-11 71.6 211 30.8
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.3e-10 70.9 220 29.1
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 3.0e-10 69.7 326 25.8
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 3.9e-10 69.3 327 26.3
Ca_13423_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 1.1e-09 67.8 172 34.3
Ca_13439_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 1.1e-09 67.8 172 34.3
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.1e-09 67.8 314 23.2
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 1.5e-09 67.4 233 30.9
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 1.9e-09 67.0 254 27.2
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 2.5e-09 66.6 321 26.5
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 2.5e-09 66.6 295 30.2
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 2.5e-09 66.6 319 23.5
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.3e-09 65.9 85 45.9
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.7e-09 65.5 331 29.0
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 7.4e-09 65.1 208 29.8
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 9.7e-09 64.7 327 25.1
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 9.7e-09 64.7 293 25.9
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.6e-08 63.9 232 27.6
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 2.2e-08 63.5 87 39.1
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 2.8e-08 63.2 93 35.5
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 2.8e-08 63.2 236 28.0
Glyma.17G259300 Glycine max HOM05D013708 ORTHO05D003197 3.7e-08 62.8 90 40.0
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 6.3e-08 62.0 202 30.2
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 6.3e-08 62.0 319 24.1
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 8.2e-08 61.6 91 41.8
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 8.2e-08 61.6 311 24.1
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.1e-07 61.2 217 26.7
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.4e-07 60.1 326 27.6
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 3.1e-07 59.7 252 25.8
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 3.1e-07 59.7 88 39.8
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 4.1e-07 59.3 314 23.9
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 4.1e-07 59.3 290 24.1
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 6.9e-07 58.5 89 37.1
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 9.0e-07 58.2 277 23.1
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 9.0e-07 58.2 285 25.3
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 9.0e-07 58.2 85 42.4
TAR625G0988 Trochodendron aralioides HOM05D004095 ORTHO05D003197 9.0e-07 58.2 157 31.8
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 9.0e-07 58.2 103 34.0
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.2e-06 57.8 277 25.6
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.5e-06 57.4 174 30.5
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-06 57.4 192 30.7
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.5e-06 57.4 192 30.7
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.6e-06 56.6 85 42.4
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 3.4e-06 56.2 269 24.9
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.4e-06 56.2 277 28.2
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 3.4e-06 56.2 79 38.0
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 4.5e-06 55.8 183 30.1
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 4.5e-06 55.8 299 24.1
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 4.5e-06 55.8 89 37.1
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 5.9e-06 55.5 321 26.8
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.9e-06 55.5 277 27.4
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 7.7e-06 55.1 84 39.3
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.0e-05 54.7 196 30.1
Glyma.14G220400 Glycine max HOM05D013708 ORTHO05D003197 1.0e-05 54.7 85 36.5


User provided reference genes

Program Settings