Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.9e-50 202.2 105 100.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.9e-40 167.2 109 77.1
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.9e-37 159.1 102 80.4
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.1e-36 154.1 103 70.9
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 3.9e-35 151.4 100 78.0
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.1e-35 151.0 101 69.3
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.7e-35 150.6 103 70.9
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 2.6e-34 148.7 100 72.0
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.3e-33 146.4 94 79.8
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.7e-33 144.8 101 70.3
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.1e-32 143.3 106 69.8
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.4e-32 142.9 100 70.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 1.4e-32 142.9 100 74.0
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 9.1e-32 140.2 113 63.7
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.2e-31 139.8 102 66.7
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.6e-31 139.4 104 70.2
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.0e-31 139.0 113 63.7
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 2.6e-31 138.7 113 63.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 4.5e-31 137.9 102 65.7
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.7e-30 136.0 104 66.3
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 5.0e-30 134.4 102 64.7
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 5.0e-30 134.4 106 62.3
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 8.5e-30 133.7 101 65.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.5e-29 132.9 109 63.3
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.5e-29 132.9 107 62.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.5e-29 132.9 101 69.3
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.9e-29 132.5 101 64.4
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.9e-29 132.5 119 59.7
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 2.5e-29 132.1 100 65.0
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.5e-29 132.1 101 64.4
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.5e-29 132.1 102 62.7
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 2.5e-29 132.1 102 63.7
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.5e-29 132.1 104 63.5
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.5e-29 132.1 104 65.4
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 5.5e-29 131.0 100 66.0
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 5.5e-29 131.0 100 66.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 5.5e-29 131.0 101 65.3
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.5e-29 131.0 108 62.0
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 5.5e-29 131.0 109 61.5
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.2e-28 129.8 106 63.2
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 1.2e-28 129.8 102 59.8
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 2.1e-28 129.0 109 60.6
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 2.7e-28 128.6 107 60.7
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 2.7e-28 128.6 108 61.1
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 3.6e-28 128.3 105 64.8
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 3.6e-28 128.3 99 62.6
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 3.6e-28 128.3 100 63.0
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 3.6e-28 128.3 100 63.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 4.7e-28 127.9 108 61.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.7e-28 127.9 108 62.0
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 4.7e-28 127.9 100 61.0
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 6.1e-28 127.5 103 58.3
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 6.1e-28 127.5 101 62.4
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 6.1e-28 127.5 110 60.0
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 6.1e-28 127.5 105 62.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 6.1e-28 127.5 103 64.1
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 8.0e-28 127.1 103 60.2
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.0e-27 126.7 104 60.6
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.0e-27 126.7 102 67.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.4e-27 126.3 102 60.8
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 5.2e-27 124.4 105 61.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 5.2e-27 124.4 104 59.6
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 5.2e-27 124.4 100 60.0
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 5.2e-27 124.4 100 60.0
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 6.7e-27 124.0 117 57.3
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.1e-26 123.2 102 58.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.1e-26 123.2 106 58.5
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 2.0e-26 122.5 105 59.0
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.0e-26 122.5 102 59.8
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.6e-26 122.1 115 57.4
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.3e-26 121.7 103 60.2
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.3e-26 121.7 103 60.2
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 3.3e-26 121.7 105 58.1
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.4e-26 121.3 106 59.4
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.4e-26 121.3 106 59.4
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.4e-26 121.3 106 59.4
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 7.5e-26 120.6 116 53.4
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 7.5e-26 120.6 114 53.5
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 9.7e-26 120.2 103 59.2
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 9.7e-26 120.2 104 58.7
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.3e-25 119.8 116 53.4
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 116 50.9
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.7e-25 119.4 104 56.7
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.2e-25 119.0 116 50.9
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 2.8e-25 118.6 116 50.9
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.8e-25 118.6 116 50.9
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.8e-25 118.6 116 50.9
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 3.7e-25 118.2 108 53.7
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 4.8e-25 117.9 108 58.3
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 8.2e-25 117.1 119 49.6
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 8.2e-25 117.1 108 57.4
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 8.2e-25 117.1 113 52.2
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.1e-24 116.7 113 51.3
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.1e-24 116.7 101 56.4
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.8e-24 115.9 114 50.9
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.1e-24 115.2 94 59.6
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.1e-24 115.2 110 53.6
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 4.1e-24 114.8 103 58.3
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 7.0e-24 114.0 106 57.5
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 9.1e-24 113.6 117 50.4
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.6e-23 112.8 103 55.3
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.0e-23 112.5 93 59.1
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.0e-23 112.5 104 56.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.5e-23 111.7 106 54.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 3.5e-23 111.7 96 58.3
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.7e-22 109.4 114 46.5
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.7e-22 109.4 97 56.7
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.8e-22 108.2 101 53.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 6.5e-22 107.5 105 52.4
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.1e-21 106.7 106 52.8
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 3.2e-21 105.1 114 45.6
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.2e-21 104.0 105 56.2
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.6e-20 102.8 95 57.9
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-20 102.4 116 46.6
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 2.1e-20 102.4 116 46.6
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-19 99.4 102 50.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.8e-19 99.4 112 47.3
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.0e-19 98.6 102 48.0
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 4.0e-19 98.2 108 47.2
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 4.0e-19 98.2 117 46.2
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 5.2e-19 97.8 111 48.6
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.5e-18 96.3 110 49.1
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 1.5e-18 96.3 115 45.2
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 5.7e-18 94.4 105 45.7
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 7.0e-16 87.4 77 62.3
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 2.1e-12 75.9 62 64.5
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.7e-12 75.5 56 71.4
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.2e-11 71.2 54 72.2
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 2.7e-07 58.9 66 43.9


User provided reference genes

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