Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03128 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.2e-161 573.2 297 100.0
Migut.N03129 Erythranthe guttata HOM05D002892 ORTHO05D003224 6.2e-110 401.4 325 72.0
Migut.N03125 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.3e-51 207.6 308 45.5
Migut.N03126 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.9e-34 150.6 144 53.5
arahy.Tifrunner.gnm1.ann1.CJD5DY Arachis hypogaea HOM05D002892 ORTHO05D003224 6.6e-19 99.0 228 32.9
Gorai.011G151000 Gossypium raimondii HOM05D002892 ORTHO05D003224 1.1e-18 98.2 313 28.4
SalBow2G2169 Salvia bowleyana HOM05D002892 ORTHO05D003224 1.1e-18 98.2 317 28.7
Ca_18006_v3 Cicer arietinum L. HOM05D002892 ORTHO05D003224 1.9e-18 97.4 228 33.3
CAN.G1155.2 Capsicum annuum HOM05D002892 ORTHO05D003224 3.3e-18 96.7 243 32.9
Ciclev10005278m.g Citrus clementina HOM05D002892 ORTHO05D003224 3.3e-18 96.7 258 29.5
Migut.N03124 Erythranthe guttata HOM05D002892 ORTHO05D003224 3.3e-18 96.7 230 31.7
MSTRG.4258 Avicennia marina HOM05D002892 ORTHO05D003224 4.3e-18 96.3 262 29.4
Thecc.04G191900 Theobroma cacao HOM05D002892 ORTHO05D003224 4.3e-18 96.3 264 31.1
Gohir.D10G136200 Gossypium hirsutum HOM05D002892 ORTHO05D003224 5.6e-18 95.9 313 28.1
Sabra02G0179800 Salix brachista HOM05D002892 ORTHO05D003224 9.5e-18 95.1 272 29.0
Nitab4.5_0000037g0190 Nicotiana tabacum HOM05D002892 ORTHO05D003224 1.2e-17 94.7 310 30.3
Duzib268G0514 Durio zibethinus HOM05D002892 ORTHO05D003224 1.6e-17 94.4 265 29.8
Gohir.A10G130100 Gossypium hirsutum HOM05D002892 ORTHO05D003224 1.6e-17 94.4 314 28.0
Cc03_g09180 Coffea canephora HOM05D002892 ORTHO05D003224 2.8e-17 93.6 226 31.0
Glyma.05G150300 Glycine max HOM05D002892 ORTHO05D003224 2.8e-17 93.6 229 29.3
Solyc09g092530.4 Solanum lycopersicum HOM05D002892 ORTHO05D003224 3.6e-17 93.2 242 31.4
Hma1.2p1_1457F.1_g284670 Hydrangea macrophylla HOM05D002892 ORTHO05D003224 6.1e-17 92.4 240 30.8
Lsat_1_v5_gn_2_47761 Lactuca sativa HOM05D002892 ORTHO05D003224 6.1e-17 92.4 225 29.8
Sopen09g035430 Solanum pennellii HOM05D002892 ORTHO05D003224 8.0e-17 92.0 306 29.4
Manes.05G199300 Manihot esculenta HOM05D002892 ORTHO05D003224 1.4e-16 91.3 255 27.8
Oeu034313.2 Olea europaea HOM05D002892 ORTHO05D003224 1.4e-16 91.3 350 27.1
Rhsim02G0068800 Rhododendron simsii HOM05D002892 ORTHO05D003224 1.4e-16 91.3 228 30.7
PGSC0003DMG400021879 Solanum tuberosum HOM05D002892 ORTHO05D003224 1.4e-16 91.3 242 31.0
COL.COLO4_04284 Corchorus olitorius HOM05D002892 ORTHO05D003224 1.8e-16 90.9 262 29.8
Migut.G00949 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.8e-16 90.9 257 27.2
CARHR099700 Cardamine hirsuta HOM05D002892 ORTHO05D003224 2.3e-16 90.5 227 29.1
Sp3g21420 Schrenkiella parvula HOM05D002892 ORTHO05D003224 3.1e-16 90.1 236 27.5
Atru.chr3.1780 Acer truncatum HOM05D002892 ORTHO05D003224 4.0e-16 89.7 264 30.7
CANSAT78G1570 Cannabis sativa HOM05D002892 ORTHO05D003224 4.0e-16 89.7 233 29.6
Potri.002G236000 Populus trichocarpa HOM05D002892 ORTHO05D003224 5.2e-16 89.4 258 27.9
FAN12G3534 Fragaria x ananassa HOM05D002892 ORTHO05D003224 8.9e-16 88.6 235 30.2
Glyma.08G107200 Glycine max HOM05D002892 ORTHO05D003224 8.9e-16 88.6 197 32.0
Psat7g076520 Pisum sativum HOM05D002892 ORTHO05D003224 8.9e-16 88.6 227 30.8
Cpa.g.sc157.20 Carica papaya HOM05D002892 ORTHO05D003224 1.2e-15 88.2 240 28.8
Lj4g0007099 Lotus japonicus HOM05D002892 ORTHO05D003224 1.2e-15 88.2 231 30.7
BcaB04g20426 Brassica carinata HOM05D002892 ORTHO05D003224 1.5e-15 87.8 226 28.3
C01p39920 Brassica napus HOM05D002892 ORTHO05D003224 1.5e-15 87.8 236 28.0
BolC1t03947H Brassica oleracea HOM05D002892 ORTHO05D003224 1.5e-15 87.8 236 28.0
Medtr8g081030 Medicago truncatula HOM05D002892 ORTHO05D003224 1.5e-15 87.8 226 32.3
PSO063G1354 Papaver somniferum HOM05D002892 ORTHO05D003224 2.0e-15 87.4 240 29.2
THA.LOC104808679 Tarenaya hassleriana HOM05D002892 ORTHO05D003224 2.6e-15 87.0 226 27.9
AT3G23710 Arabidopsis thaliana HOM05D002892 ORTHO05D003224 3.4e-15 86.7 239 27.2
MELO3C026126.2 Cucumis melo HOM05D002892 ORTHO05D003224 3.4e-15 86.7 241 30.3
ECA238G4530 Erigeron canadensis HOM05D007777 ORTHO05D007255 3.4e-15 86.7 226 28.8
AL3G38580 Arabidopsis lyrata HOM05D002892 ORTHO05D003224 4.4e-15 86.3 239 27.2
A01p31310 Brassica napus HOM05D002892 ORTHO05D003224 4.4e-15 86.3 236 27.5
BraA01t03257Z Brassica rapa HOM05D002892 ORTHO05D003224 4.4e-15 86.3 236 27.5
Hund19023 Selenicereus undatus HOM05D002892 ORTHO05D003224 4.4e-15 86.3 259 28.6
CsaV3_6G003080 Cucumis sativus L. HOM05D002892 ORTHO05D003224 7.5e-15 85.5 255 28.6
TAR362G0375 Trochodendron aralioides HOM05D002892 ORTHO05D003224 7.5e-15 85.5 259 29.0
TWI53G0024 Tripterygium wilfordii HOM05D002892 ORTHO05D003224 1.3e-14 84.7 238 29.4
Aa31LG8G10260 Aethionema arabicum HOM05D002892 ORTHO05D003224 1.7e-14 84.3 240 28.3
Carub.0003s2401 Capsella rubella HOM05D002892 ORTHO05D003224 1.7e-14 84.3 241 27.4
PSO017G1890 Papaver somniferum HOM05D002892 ORTHO05D003224 2.2e-14 84.0 233 29.6
Peaxi162Scf00286g01040 Petunia axillaris HOM05D002892 ORTHO05D003224 2.2e-14 84.0 234 29.5
ATR0561G132 Amborella trichopoda HOM05D002892 ORTHO05D003224 3.7e-14 83.2 240 26.7
Phvul.003G291300 Phaseolus vulgaris HOM05D002892 ORTHO05D003224 4.9e-14 82.8 234 27.4
TPR.G11829 Trifolium pratense HOM05D002892 ORTHO05D003224 6.4e-14 82.4 227 30.8
Lalb_Chr12g0205811 Lupinus albus HOM05D002892 ORTHO05D003224 8.3e-14 82.0 297 27.3
Eucgr.L00633 Eucalyptus grandis HOM05D002892 ORTHO05D003224 1.1e-13 81.6 230 28.7
PGR142G0163 Punica granatum HOM05D002892 ORTHO05D003224 1.1e-13 81.6 240 29.2
Sed0019564 Sechium edule HOM05D002892 ORTHO05D003224 1.4e-13 81.3 228 30.7
Thecc.04G192000 Theobroma cacao HOM05D002892 ORTHO05D003224 1.9e-13 80.9 263 30.0
DCAR_021439 Daucus carota HOM05D002892 ORTHO05D003224 2.4e-13 80.5 235 28.1
CiPaw.01G113900 Carya illinoinensis HOM05D002892 ORTHO05D003224 3.2e-13 80.1 230 28.3
Cfa008658 Carpinus fangiana HOM05D002892 ORTHO05D003224 4.1e-13 79.7 230 27.4
FvH4_4g12880 Fragaria vesca HOM05D002892 ORTHO05D003224 4.1e-13 79.7 233 29.2
MD04G1021300 Malus domestica HOM05D002892 ORTHO05D003224 4.1e-13 79.7 247 28.7
Actinidia24786 Actinidia chinensis HOM05D002892 ORTHO05D003224 5.4e-13 79.3 260 28.5
Thhalv10002616m.g Eutrema salsugineum HOM05D002892 ORTHO05D003224 1.2e-12 78.2 231 27.7
FAN07G0904 Fragaria x ananassa HOM05D002892 ORTHO05D003224 1.2e-12 78.2 237 28.3
Aqoxy2G04043 Aquilegia oxysepala HOM05D002892 ORTHO05D003224 2.0e-12 77.4 228 27.6
RcHm_v2.0_Chr4g0412551 Rosa chinensis HOM05D002892 ORTHO05D003224 3.5e-12 76.6 246 28.5
MBI07_g02622_MAGBIO Magnolia biondii HOM05D002892 ORTHO05D003224 4.6e-12 76.3 261 26.4
vmacro15589 Vaccinium macrocarpon HOM05D002892 ORTHO05D003224 6.0e-12 75.9 275 26.9
Oeu059303.1 Olea europaea HOM05D002892 ORTHO05D003224 7.8e-12 75.5 140 36.4
Oeu059304.1 Olea europaea HOM05D002892 ORTHO05D003224 7.8e-12 75.5 140 36.4
SGA_v2.0_scaffold17G08007 Striga asiatica HOM05D002892 ORTHO05D003224 1.3e-11 74.7 259 26.3
arahy.Tifrunner.gnm1.ann1.IRX0L3 Arachis hypogaea HOM05D002892 ORTHO05D003224 1.7e-11 74.3 281 26.7
EL10Ac3g07434 Beta vulgaris HOM05D002892 ORTHO05D003224 1.7e-11 74.3 239 26.8
Duzib151G0859 Durio zibethinus HOM05D002892 ORTHO05D003224 2.3e-11 73.9 258 26.0
Oeu043283.1 Olea europaea HOM05D002892 ORTHO05D003224 1.5e-10 71.2 148 33.1
GSVIVG01031575001 Vitis vinifera HOM05D002892 ORTHO05D003224 7.3e-10 68.9 117 35.9
Oeu059301.1 Olea europaea HOM05D002892 ORTHO05D292370 9.5e-10 68.6 119 34.5
CAN.G1684.1 Capsicum annuum HOM05D002892 ORTHO05D003224 4.7e-09 66.2 126 35.7
Pp3c6_7780 Physcomitrium patens HOM05D002892 ORTHO05D003224 4.7e-09 66.2 229 26.2
Ah.13g077800 Amaranthus hybridus HOM05D002892 ORTHO05D003224 6.2e-09 65.9 245 25.3
Dinv32165 Davidia involucrata HOM05D002892 ORTHO05D003224 6.2e-09 65.9 232 28.9
Oeu059298.1 Olea europaea HOM05D002892 ORTHO05D288095 6.2e-09 65.9 119 34.5
SGA_v2.0_scaffold43G16362 Striga asiatica HOM05D002892 ORTHO05D003224 6.2e-09 65.9 127 36.2
Zm00001eb305250 Zea mays HOM05D002892 ORTHO05D003224 6.2e-09 65.9 130 33.8
HanXRQChr14g0436511 Helianthus annuus HOM05D002892 ORTHO05D003224 8.0e-09 65.5 210 27.1
Os07g0290800 Oryza sativa ssp. japonica HOM05D002892 ORTHO05D003224 1.4e-08 64.7 130 33.8
SalBow2G0061 Salvia bowleyana HOM05D002892 ORTHO05D003224 3.1e-08 63.5 317 24.9
SMO367G0099 Selaginella moellendorffii HOM05D002892 ORTHO05D003224 4.0e-08 63.2 229 25.8
SGA_v2.0_scaffold345G49491 Striga asiatica HOM05D002892 ORTHO05D003224 2.0e-07 60.8 246 24.4
HPP92_013635 Vanilla planifolia HOM05D002892 ORTHO05D003224 2.6e-07 60.5 228 26.3
VMungo0251G1985 Vigna mungo HOM05D002892 ORTHO05D003224 3.4e-07 60.1 159 27.0
AUR62020883 Chenopodium quinoa HOM05D002892 ORTHO05D003224 1.7e-06 57.8 224 26.8
QL06p027085 Quercus lobata HOM05D002892 ORTHO05D003224 1.7e-06 57.8 175 27.4
CBR_g39650 Chara braunii HOM05D002892 ORTHO05D003224 2.2e-06 57.4 234 24.4
HPP92_013630 Vanilla planifolia HOM05D002892 ORTHO05D003224 2.2e-06 57.4 255 25.9
Manes.18G036600 Manihot esculenta HOM05D002892 ORTHO05D003224 2.9e-06 57.0 114 34.2
CsaV3_4G034280 Cucumis sativus L. HOM05D002892 ORTHO05D003224 4.9e-06 56.2 119 31.1
Sc25g0005750 Simmondsia chinensis HOM05D002892 ORTHO05D003224 6.4e-06 55.8 205 26.8


User provided reference genes

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