Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03059 Erythranthe guttata HOM05D007605 ORTHO05D009572 2.3e-31 138.3 69 100.0
SGA_v2.0_scaffold25G11005 Striga asiatica HOM05D000384 ORTHO05D009572 3.8e-26 120.9 69 88.4
SalBow6G4154 Salvia bowleyana HOM05D007605 ORTHO05D009572 2.4e-25 118.2 69 82.6
Sopen06g018580 Solanum pennellii HOM05D007605 ORTHO05D009572 1.1e-22 109.4 67 76.1
PGSC0003DMG400016297 Solanum tuberosum HOM05D007605 ORTHO05D009572 1.5e-22 109.0 67 76.1
Peaxi162Scf00579g00018 Petunia axillaris HOM05D007605 ORTHO05D009572 4.3e-22 107.5 67 76.1
Rhsim09G0008600 Rhododendron simsii HOM05D007605 ORTHO05D009572 4.3e-22 107.5 64 82.8
Nn1g09550 Nelumbo nucifera HOM05D007605 ORTHO05D009572 5.6e-22 107.1 69 76.8
CANSAT01G0287 Cannabis sativa HOM05D007605 ORTHO05D009572 7.3e-22 106.7 69 76.8
Nitab4.5_0004700g0030 Nicotiana tabacum HOM05D001130 ORTHO05D001052 7.3e-22 106.7 69 72.5
Nitab4.5_0007474g0060 Nicotiana tabacum HOM05D007605 ORTHO05D009572 1.6e-21 105.5 67 73.1
Thecc.04G164300 Theobroma cacao HOM05D007605 ORTHO05D009572 3.6e-21 104.4 69 76.8
Haze_00851 Corylus avellana HOM05D007605 ORTHO05D009572 4.7e-21 104.0 69 73.9
MD03G1210800 Malus domestica HOM05D007605 ORTHO05D009572 4.7e-21 104.0 69 72.5
Cfa015674 Carpinus fangiana HOM05D007605 ORTHO05D009572 6.2e-21 103.6 69 73.9
PGR142G0642 Punica granatum HOM05D007605 ORTHO05D009572 6.2e-21 103.6 64 79.7
Sed0018718 Sechium edule HOM05D007605 ORTHO05D009572 6.2e-21 103.6 62 79.0
Ah.07g202920 Amaranthus hybridus HOM05D007605 ORTHO05D009572 8.1e-21 103.2 70 74.3
Ca_08431_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 1.1e-20 102.8 69 71.0
Ca_14651_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 1.1e-20 102.8 69 71.0
Potri.019G096700 Populus trichocarpa HOM05D007605 ORTHO05D009572 1.1e-20 102.8 66 78.8
Sc13g0006890 Simmondsia chinensis HOM05D007605 ORTHO05D009572 1.1e-20 102.8 69 72.5
TWI63G1406 Tripterygium wilfordii HOM05D007605 ORTHO05D009572 1.1e-20 102.8 69 75.4
Prupe.4G204500 Prunus persica HOM05D007605 ORTHO05D009572 1.4e-20 102.4 69 71.0
VMungo1383G0010 Vigna mungo HOM05D003647 ORTHO05D004182 2.4e-20 101.7 67 73.1
arahy.Tifrunner.gnm1.ann1.FBG7WK Arachis hypogaea HOM05D007605 ORTHO05D009572 3.1e-20 101.3 66 74.2
arahy.Tifrunner.gnm1.ann1.MPL0H7 Arachis hypogaea HOM05D007605 ORTHO05D009572 3.1e-20 101.3 66 74.2
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 4.0e-20 100.9 66 77.3
Cpa.g.sc9.378 Carica papaya HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 75.4
Glyma.18G297600 Glycine max HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 71.0
MD11G1225700 Malus domestica HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 71.0
Medtr7g091060 Medicago truncatula HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 69.6
Phvul.008G005000 Phaseolus vulgaris HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 71.0
Potri.019G096500 Populus trichocarpa HOM05D007605 ORTHO05D009572 5.2e-20 100.5 64 78.1
Duzib212G0337 Durio zibethinus HOM05D007605 ORTHO05D009572 6.9e-20 100.1 69 73.9
RcHm_v2.0_Chr4g0405791 Rosa chinensis HOM05D007605 ORTHO05D009572 6.9e-20 100.1 69 69.6
Sabra13G0106700 Salix brachista HOM05D007605 ORTHO05D009572 8.9e-20 99.8 66 75.8
AUR62002411 Chenopodium quinoa HOM05D007605 ORTHO05D009572 1.2e-19 99.4 57 80.7
FAN05G3507 Fragaria x ananassa HOM05D007605 ORTHO05D009572 1.5e-19 99.0 69 69.6
Glyma.08G364500 Glycine max HOM05D007605 ORTHO05D009572 1.5e-19 99.0 69 69.6
Aqoxy4G02871 Aquilegia oxysepala HOM05D007605 ORTHO05D009572 2.0e-19 98.6 61 78.7
FAN05G0946 Fragaria x ananassa HOM05D007605 ORTHO05D009572 2.0e-19 98.6 67 70.1
RcHm_v2.0_Chr7g0232231 Rosa chinensis HOM05D007605 ORTHO05D009572 2.0e-19 98.6 69 69.6
Ciclev10023247m.g Citrus clementina HOM05D007605 ORTHO05D009572 2.6e-19 98.2 56 82.1
DCAR_030842 Daucus carota HOM05D007605 ORTHO05D009572 3.4e-19 97.8 61 75.4
MBI07_g11492_MAGBIO Magnolia biondii HOM05D007605 ORTHO05D009572 3.4e-19 97.8 59 79.7
Atru.chr4.1455 Acer truncatum HOM05D007605 ORTHO05D009572 4.4e-19 97.4 59 79.7
FAN14G0446 Fragaria x ananassa HOM05D007605 ORTHO05D009572 4.4e-19 97.4 69 68.1
TPR.G18242 Trifolium pratense HOM05D007605 ORTHO05D009572 4.4e-19 97.4 70 70.0
CSS0027032 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 5.8e-19 97.1 56 82.1
CSS0028313 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 5.8e-19 97.1 56 82.1
CiPaw.01G168900 Carya illinoinensis HOM05D007605 ORTHO05D009572 5.8e-19 97.1 61 78.7
FvH4_6g21131 Fragaria vesca HOM05D007605 ORTHO05D009572 5.8e-19 97.1 67 68.7
THA.LOC104802329 Tarenaya hassleriana HOM05D007605 ORTHO05D009572 5.8e-19 97.1 55 83.6
PSO573G0041 Papaver somniferum HOM05D007605 ORTHO05D009572 7.6e-19 96.7 70 71.4
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 9.9e-19 96.3 64 75.0
COL.COLO4_38114 Corchorus olitorius HOM05D007605 ORTHO05D009572 9.9e-19 96.3 55 81.8
MELO3C011854.2 Cucumis melo HOM05D007605 ORTHO05D009572 9.9e-19 96.3 59 76.3
EL10Ac3g06103 Beta vulgaris HOM05D007605 ORTHO05D009572 1.7e-18 95.5 62 72.6
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 1.7e-18 95.5 64 73.4
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 1.7e-18 95.5 64 73.4
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 1.7e-18 95.5 64 73.4
Gohir.A10G144600 Gossypium hirsutum HOM05D007605 ORTHO05D009572 1.7e-18 95.5 55 81.8
Lj6g0016727 Lotus japonicus HOM05D007605 ORTHO05D009572 1.7e-18 95.5 69 68.1
Eucgr.H04449 Eucalyptus grandis HOM05D007605 ORTHO05D009572 2.2e-18 95.1 55 83.6
ECA248G2718 Erigeron canadensis HOM05D007605 ORTHO05D009572 2.9e-18 94.7 52 84.6
Manes.05G136900 Manihot esculenta HOM05D007605 ORTHO05D009572 2.9e-18 94.7 55 80.0
Manes.08G010900 Manihot esculenta HOM05D007605 ORTHO05D009572 2.9e-18 94.7 55 80.0
BcaB01g03362 Brassica carinata HOM05D007605 ORTHO05D009572 3.8e-18 94.4 63 76.2
Glyma.19G073500 Glycine max HOM05D007605 ORTHO05D009572 3.8e-18 94.4 69 66.7
Psat3g074320 Pisum sativum HOM05D007605 ORTHO05D009572 3.8e-18 94.4 69 66.7
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 4.9e-18 94.0 68 69.1
BcaC01g05214 Brassica carinata HOM05D007605 ORTHO05D009572 4.9e-18 94.0 64 73.4
C03p29150 Brassica napus HOM05D007605 ORTHO05D009572 4.9e-18 94.0 64 73.4
BolC3t15267H Brassica oleracea HOM05D007605 ORTHO05D009572 4.9e-18 94.0 64 73.4
Sp4g25850 Schrenkiella parvula HOM05D007605 ORTHO05D009572 4.9e-18 94.0 62 75.8
Lj6g0006319 Lotus japonicus HOM05D007605 ORTHO05D009572 6.4e-18 93.6 69 66.7
Lalb_Chr04g0257371 Lupinus albus HOM05D007605 ORTHO05D009572 6.4e-18 93.6 55 80.0
A03p24460 Brassica napus HOM05D007605 ORTHO05D009572 1.1e-17 92.8 64 73.4
BraA03t11655Z Brassica rapa HOM05D007605 ORTHO05D009572 1.1e-17 92.8 64 73.4
Carub.0004s2631 Capsella rubella HOM05D007605 ORTHO05D009572 1.1e-17 92.8 55 80.0
Lj1g0002800 Lotus japonicus HOM05D007605 ORTHO05D009572 1.4e-17 92.4 69 65.2
AL4G42650 Arabidopsis lyrata HOM05D007605 ORTHO05D009572 2.4e-17 91.7 55 80.0
Lsat_1_v5_gn_1_21060 Lactuca sativa HOM05D007605 ORTHO05D009572 2.4e-17 91.7 52 80.8
Lj1g0021920 Lotus japonicus HOM05D007605 ORTHO05D009572 2.4e-17 91.7 69 65.2
BcaB05g23281 Brassica carinata HOM05D007605 ORTHO05D009572 3.2e-17 91.3 66 69.7
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 3.2e-17 91.3 64 70.3
Atru.chr12.2308 Acer truncatum HOM05D007605 ORTHO05D009572 4.2e-17 90.9 59 76.3
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 4.2e-17 90.9 64 70.3
ATR0743G065 Amborella trichopoda HOM05D007605 ORTHO05D009572 5.4e-17 90.5 65 67.7
AT2G43780 Arabidopsis thaliana HOM05D007605 ORTHO05D009572 5.4e-17 90.5 55 80.0
Os05g0103800 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 9.3e-17 89.7 52 80.8
Thhalv10001711m.g Eutrema salsugineum HOM05D007605 ORTHO05D009572 1.2e-16 89.4 63 71.4
Gohir.D10G122400 Gossypium hirsutum HOM05D007605 ORTHO05D009572 2.1e-16 88.6 56 78.6
Gorai.011G134700 Gossypium raimondii HOM05D007605 ORTHO05D009572 2.1e-16 88.6 56 78.6
CARHR138960 Cardamine hirsuta HOM05D007605 ORTHO05D009572 3.5e-16 87.8 55 78.2
Os12g0611700 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 3.5e-16 87.8 52 78.8
QL10p056550 Quercus lobata HOM05D007605 ORTHO05D009572 2.3e-15 85.1 52 78.8
ClCG11G013540 Citrullus lanatus HOM05D007605 ORTHO05D009572 1.1e-14 82.8 48 81.2
Glyma.19G030600 Glycine max HOM05D007605 ORTHO05D009572 1.1e-14 82.8 69 60.9
Lsat_1_v5_gn_1_74540 Lactuca sativa HOM05D007605 ORTHO05D009572 2.5e-14 81.6 47 83.0
Lj6C218G0 Lonicera japonica HOM05D000384 ORTHO05D000468 7.3e-14 80.1 42 90.5
CsaV3_5G030160 Cucumis sativus L. HOM05D007605 ORTHO05D009572 1.3e-13 79.3 46 80.4
vmacro23387 Vaccinium macrocarpon HOM05D007605 ORTHO05D009572 2.1e-13 78.6 49 77.6
Glyma.17G205632 Glycine max HOM05D007605 ORTHO05D009572 3.6e-13 77.8 45 80.0
GSVIVG01038176001 Vitis vinifera HOM05D007605 ORTHO05D009572 1.1e-12 76.3 66 60.6
BcaC05g29066 Brassica carinata HOM05D007605 ORTHO05D009572 2.4e-09 65.1 46 69.6
Mapoly0044s0040 Marchantia polymorpha HOM05D007605 ORTHO05D009572 1.2e-08 62.8 45 66.7
Pp3c9_12740 Physcomitrium patens HOM05D007605 ORTHO05D009572 7.9e-08 60.1 56 58.9


User provided reference genes

Program Settings