Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 2.5e-72 275.8 190 100.0
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 4.4e-53 211.8 201 80.1
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 2.9e-52 209.1 198 76.8
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.9e-51 206.5 200 68.5
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.4e-51 206.1 199 79.4
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.2e-50 203.8 124 85.5
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 1.3e-49 200.3 199 76.9
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 2.3e-49 199.5 198 75.3
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 3.9e-49 198.7 124 81.5
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 5.1e-49 198.4 202 76.2
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 1.1e-48 197.2 199 75.4
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 1.5e-48 196.8 199 75.9
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.5e-48 196.8 198 73.2
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 4.3e-48 195.3 198 73.2
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 5.6e-48 194.9 121 81.0
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 5.6e-48 194.9 121 81.0
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 5.6e-48 194.9 206 73.8
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 9.6e-48 194.1 200 63.5
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 1.3e-47 193.7 199 73.9
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 2.1e-47 193.0 211 67.8
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 2.1e-47 193.0 111 85.6
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 2.1e-47 193.0 119 84.9
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 2.1e-47 193.0 197 73.1
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 3.6e-47 192.2 195 79.0
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 3.6e-47 192.2 114 85.1
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 4.8e-47 191.8 114 85.1
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 1.1e-46 190.7 200 73.0
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 1.4e-46 190.3 113 84.1
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.4e-46 190.3 200 75.5
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 2.4e-46 189.5 201 75.6
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 3.1e-46 189.1 113 85.0
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 3.1e-46 189.1 113 85.0
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.1e-46 189.1 113 83.2
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.1e-46 189.1 113 83.2
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 4.0e-46 188.7 196 76.0
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 4.0e-46 188.7 111 85.6
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 6.9e-46 188.0 102 92.2
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 9.0e-46 187.6 200 75.0
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 9.0e-46 187.6 200 75.0
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 9.0e-46 187.6 198 75.8
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.2e-45 187.2 105 91.4
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.2e-45 187.2 111 84.7
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.5e-45 186.8 190 77.4
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 2.0e-45 186.4 190 76.3
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 2.0e-45 186.4 124 79.0
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 2.6e-45 186.0 199 69.3
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 3.4e-45 185.7 201 74.6
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 4.5e-45 185.3 190 75.8
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 7.6e-45 184.5 196 72.4
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 7.6e-45 184.5 115 80.9
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 7.6e-45 184.5 200 73.5
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 7.6e-45 184.5 108 84.3
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 7.6e-45 184.5 108 84.3
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 1.3e-44 183.7 148 67.6
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 1.7e-44 183.3 111 82.9
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 2.2e-44 183.0 198 71.2
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 2.2e-44 183.0 111 82.9
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 2.9e-44 182.6 115 80.0
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.9e-44 182.6 107 86.0
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 2.9e-44 182.6 107 86.0
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 3.8e-44 182.2 190 77.4
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 3.8e-44 182.2 109 84.4
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 3.8e-44 182.2 106 84.9
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 3.8e-44 182.2 107 85.0
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 4.9e-44 181.8 103 88.3
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 6.4e-44 181.4 190 75.3
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 6.4e-44 181.4 107 85.0
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.1e-43 180.6 110 82.7
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 1.1e-43 180.6 108 82.4
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 1.1e-43 180.6 200 73.5
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.4e-43 180.3 205 69.3
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 1.4e-43 180.3 203 64.5
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 1.4e-43 180.3 121 78.5
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 3.2e-43 179.1 105 85.7
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 3.2e-43 179.1 105 85.7
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 3.2e-43 179.1 123 75.6
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.2e-43 178.7 190 75.8
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 4.2e-43 178.7 125 72.8
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 4.2e-43 178.7 202 73.3
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 5.5e-43 178.3 103 86.4
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 7.1e-43 177.9 107 85.0
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.2e-42 177.2 202 68.8
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 4.6e-42 175.3 102 84.3
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 7.9e-42 174.5 197 71.6
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 7.9e-42 174.5 202 69.3
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 1.3e-41 173.7 196 73.0
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.8e-41 173.3 190 72.1
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 5.1e-41 171.8 101 84.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 5.1e-41 171.8 101 84.2
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.1e-40 170.6 103 82.5
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.1e-40 170.6 106 81.1
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.5e-40 170.2 192 74.5
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 4.3e-40 168.7 107 79.4
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 4.3e-40 168.7 203 70.0
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 4.3e-40 168.7 200 69.0
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 4.3e-40 168.7 101 82.2
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 5.6e-40 168.3 103 80.6
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 5.6e-40 168.3 103 80.6
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 7.4e-40 167.9 217 66.8
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 7.4e-40 167.9 111 74.8
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.3e-39 167.2 205 65.4
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 3.7e-39 165.6 202 68.8
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 4.8e-39 165.2 108 76.9
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 4.8e-39 165.2 108 76.9
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 4.8e-39 165.2 108 76.9
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 6.2e-39 164.9 103 77.7
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.1e-38 164.1 105 80.0
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.4e-38 163.7 115 74.8
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 1.8e-38 163.3 116 73.3
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 6.9e-38 161.4 124 71.0
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 6.9e-38 161.4 103 77.7
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 6.9e-38 161.4 103 77.7
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.2e-37 160.6 192 70.8
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 5.8e-37 158.3 223 65.9
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.7e-36 156.8 102 74.5
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 4.9e-36 155.2 188 52.1
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 1.2e-34 150.6 113 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 4.6e-34 148.7 118 64.4
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 1.0e-33 147.5 118 68.6
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 1.0e-33 147.5 169 72.2
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 3.3e-32 142.5 164 52.4
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 1.3e-31 140.6 80 90.0
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 2.4e-30 136.3 116 62.9
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.2e-29 134.0 184 68.5
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.5e-29 133.7 191 45.5
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 2.0e-29 133.3 124 62.1
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 1.1e-27 127.5 80 78.8
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 7.2e-27 124.8 71 83.1
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.3e-25 120.6 225 38.7
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 3.0e-25 119.4 87 71.3
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 6.7e-25 118.2 65 89.2
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 6.7e-25 118.2 65 89.2
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.9e-24 116.7 87 69.0
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 3.3e-24 115.9 152 71.7
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 2.2e-23 113.2 95 62.1
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 7.7e-21 104.8 83 72.3
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-20 104.4 160 67.5
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 1.1e-19 100.9 222 56.8
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-17 94.4 145 55.9
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 2.3e-17 93.2 86 58.1
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 3.9e-17 92.4 114 48.2
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 2.0e-16 90.1 123 48.8
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 3.3e-16 89.4 106 53.8
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 3.3e-16 89.4 208 54.8
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 3.3e-16 89.4 252 46.0
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.5e-13 80.5 61 68.9
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 2.0e-13 80.1 182 35.7
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 2.0e-13 80.1 182 35.7
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 1.3e-12 77.4 139 69.8
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 2.2e-12 76.6 77 54.5
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 8.5e-12 74.7 51 82.4
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 1.2e-10 70.9 34 91.2
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 1.4e-09 67.4 137 62.8
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 6.7e-09 65.1 127 65.4
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 6.7e-09 65.1 129 69.8
Lalb_Chr23g0275001 Lupinus albus HOM05D004131 ORTHO05D004778 1.5e-08 63.9 112 60.7
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 2.6e-08 63.2 124 69.4
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 8.2e-07 58.2 128 59.4
Zm00001eb027620 Zea mays HOM05D002020 ORTHO05D002046 1.4e-06 57.4 38 76.3
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 1.8e-06 57.0 128 55.5
A09p52080 Brassica napus HOM05D004131 ORTHO05D004778 7.0e-06 55.1 31 87.1


User provided reference genes

Program Settings