Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 3.4e-311 1070.8 555 100.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 8.6e-97 358.6 636 42.9
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 4.9e-76 289.7 573 39.6
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 3.4e-69 266.9 553 41.0
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 1.6e-66 258.1 532 38.7
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 2.8e-55 220.7 588 34.9
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 2.8e-55 220.7 596 34.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 1.8e-54 218.0 591 34.9
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 3.4e-53 213.8 569 35.1
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 1.3e-52 211.8 569 35.1
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.3e-47 195.3 597 33.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 3.1e-46 190.7 564 33.5
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 1.2e-45 188.7 574 33.8
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 4.5e-45 186.8 555 33.9
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 4.9e-44 183.3 586 34.0
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 1.1e-43 182.2 605 32.4
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 5.5e-43 179.9 594 33.3
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 7.1e-43 179.5 591 33.3
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 3.5e-42 177.2 583 33.3
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 7.9e-42 176.0 614 30.8
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 1.3e-41 175.3 595 33.3
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.8e-41 174.9 573 33.2
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 2.5e-40 171.0 602 31.4
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.8e-38 164.9 592 30.6
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.8e-38 164.9 576 30.6
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 6.9e-38 162.9 538 30.7
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 5.9e-37 159.8 484 31.8
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 7.7e-37 159.5 604 31.0
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 2.2e-36 157.9 596 29.9
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 2.9e-36 157.5 579 30.4
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.0e-36 156.8 538 31.8
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 6.5e-36 156.4 507 30.8
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.4e-35 155.2 538 29.7
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-35 154.5 551 30.5
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-35 154.5 559 30.8
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-35 154.5 559 30.8
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 4.2e-35 153.7 571 32.7
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 1.2e-34 152.1 602 29.4
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 4.6e-34 150.2 527 31.7
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 4.6e-34 150.2 586 31.1
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 6.1e-34 149.8 614 28.8
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 6.1e-34 149.8 472 30.7
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 1.0e-33 149.1 595 28.9
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 1.8e-33 148.3 442 31.7
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 3.9e-33 147.1 571 29.9
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 6.7e-33 146.4 567 28.7
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 5.7e-32 143.3 586 30.2
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 5.7e-32 143.3 575 28.7
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 2.2e-31 141.4 581 29.9
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 4.8e-31 140.2 559 31.7
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 6.3e-31 139.8 383 33.2
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 6.3e-31 139.8 609 28.4
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 6.3e-31 139.8 633 28.9
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 8.2e-31 139.4 539 30.6
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 6.9e-30 136.3 461 31.5
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 6.9e-30 136.3 495 31.1
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 4.5e-29 133.7 570 29.5
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 5.0e-28 130.2 603 29.2
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 6.5e-28 129.8 504 32.1
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 5.5e-27 126.7 572 29.4
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 2.7e-26 124.4 593 28.3
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 6.1e-26 123.2 614 28.0
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.4e-25 122.1 628 28.3
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 8.8e-25 119.4 591 29.1
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 3.3e-24 117.5 588 29.3
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 4.4e-24 117.1 587 27.6
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.4e-24 117.1 480 28.5
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 5.7e-24 116.7 259 38.2
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 7.4e-24 116.3 518 28.0
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.7e-23 115.2 558 28.1
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 2.2e-23 114.8 580 27.9
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 2.2e-23 114.8 614 27.0
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 4.8e-23 113.6 609 28.6
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.1e-22 112.5 587 29.0
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 1.4e-22 112.1 606 26.1
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 4.1e-22 110.5 592 28.0
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.1e-22 110.5 540 27.0
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 7.0e-22 109.8 587 27.3
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 1.2e-21 109.0 604 28.3
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.0e-21 108.2 277 38.3
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 2.6e-21 107.8 587 27.4
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 3.5e-21 107.5 588 26.9
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 5.9e-21 106.7 596 29.2
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.0e-20 105.9 523 27.2
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.7e-20 105.1 587 27.1
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 3.2e-19 100.9 576 27.4
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.2e-18 99.0 498 28.3
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 8.8e-17 92.8 447 28.4
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.8e-15 87.8 520 25.2
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 8.2e-15 86.3 543 26.7
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 2.4e-14 84.7 372 29.6
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 1.6e-13 82.0 340 30.3
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.6e-13 82.0 544 25.0
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 2.2e-12 78.2 387 29.5
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 8.5e-12 76.3 415 28.2
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 1.1e-11 75.9 390 29.2
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 1.6e-10 72.0 598 25.4
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.1e-10 71.6 233 30.5
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 8.0e-10 69.7 94 45.7
unitig_578.g16247 Utricularia gibba HOM05D007315 ORTHO05D008940 2.0e-08 65.1 273 25.3
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 5.7e-08 63.5 418 24.9
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 5.7e-08 63.5 455 26.4
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 9.7e-08 62.8 292 28.4
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 9.7e-08 62.8 490 26.7


User provided reference genes

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