Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 5.3e-160 567.8 314 100.0
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.4e-139 500.0 317 91.2
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 5.8e-90 335.1 313 62.6
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 1.1e-85 320.9 299 66.2
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 6.8e-83 311.6 299 63.2
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 1.2e-63 247.7 304 57.9
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 3.4e-58 229.6 320 51.6
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 4.9e-57 225.7 328 49.4
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 4.6e-47 192.6 308 47.4
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 6.0e-47 192.2 280 50.7
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 7.9e-47 191.8 304 47.4
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 1.1e-45 188.0 316 43.7
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.5e-45 186.8 329 44.4
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 3.3e-45 186.4 329 47.7
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.3e-45 186.4 301 46.8
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 5.6e-45 185.7 305 46.9
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 7.4e-45 185.3 303 47.5
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.1e-44 181.8 311 44.7
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.1e-43 181.4 308 46.4
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.4e-43 181.0 322 47.2
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.8e-43 180.6 311 44.1
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.0e-43 179.5 311 43.7
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.4e-42 176.4 305 45.6
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 4.5e-42 176.0 317 47.0
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 1.0e-41 174.9 315 48.6
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.9e-40 170.6 253 53.4
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 3.2e-40 169.9 289 47.4
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 9.3e-40 168.3 308 41.9
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.2e-39 167.9 264 46.6
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.0e-38 164.9 304 41.4
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 2.3e-38 163.7 316 41.8
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 6.7e-38 162.2 318 42.5
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 8.7e-38 161.8 308 45.1
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.3e-37 159.8 306 41.2
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 3.3e-37 159.8 158 58.9
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.3e-37 159.5 323 40.6
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.6e-36 157.5 327 46.8
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.8e-36 156.8 302 41.7
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 2.8e-36 156.8 272 47.8
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 3.7e-36 156.4 281 44.5
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 4.8e-36 156.0 276 44.6
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.8e-35 154.1 165 58.8
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-35 154.1 277 43.7
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 5.3e-35 152.5 318 38.1
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 6.9e-35 152.1 150 60.0
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 9.0e-35 151.8 305 44.9
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 3.4e-34 149.8 307 37.5
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 7.6e-34 148.7 313 45.0
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 7.6e-34 148.7 150 60.0
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 1.3e-33 147.9 320 41.2
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 2.9e-33 146.7 312 39.4
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 3.8e-33 146.4 304 41.8
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 5.0e-33 146.0 274 43.8
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 8.5e-33 145.2 331 39.9
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 8.5e-33 145.2 320 42.2
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.4e-32 144.4 295 41.4
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.5e-32 143.7 317 37.2
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 3.2e-32 143.3 297 45.1
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 4.2e-32 142.9 159 58.5
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.2e-32 142.9 280 44.6
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 7.2e-32 142.1 302 38.4
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 1.2e-31 141.4 337 38.6
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.7e-31 140.2 302 40.1
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 3.6e-31 139.8 311 40.5
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 3.6e-31 139.8 149 58.4
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 6.1e-31 139.0 294 45.2
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.0e-30 138.3 286 42.3
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.8e-30 137.5 326 37.4
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.0e-30 136.7 315 38.1
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.1e-29 134.8 332 38.0
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.5e-29 134.4 166 51.8
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 4.3e-29 132.9 287 39.7
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 4.3e-29 132.9 293 42.3
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.6e-28 131.0 332 40.1
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.6e-28 131.0 332 40.1
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.2e-28 130.6 332 40.1
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 8.2e-28 128.6 305 38.0
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.2e-28 128.6 332 36.4
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.4e-27 127.9 154 56.5
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 6.9e-27 125.6 300 42.3
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 1.2e-26 124.8 318 37.4
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 2.0e-26 124.0 278 38.5
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 2.0e-26 124.0 278 38.5
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 5.9e-26 122.5 228 40.4
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.3e-25 121.3 290 37.2
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.3e-25 121.3 290 37.2
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.3e-25 121.3 290 37.2
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.7e-25 120.9 223 49.3
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.2e-25 120.6 230 38.7
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 2.2e-25 120.6 312 37.2
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.2e-25 120.6 233 44.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.9e-25 120.2 317 38.5
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 3.8e-25 119.8 295 37.6
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.1e-24 118.2 219 43.4
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.4e-24 117.9 218 44.5
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.9e-24 117.5 279 43.0
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 9.4e-24 115.2 308 39.9
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 9.4e-24 115.2 260 40.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 9.4e-24 115.2 279 42.7
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 7.9e-23 112.1 282 42.6
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.4e-22 111.3 133 56.4
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.9e-22 109.8 302 37.1
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 8.8e-22 108.6 255 36.9
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 5.7e-21 105.9 222 39.2
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 7.4e-21 105.5 101 64.4
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 2.2e-20 104.0 313 38.3
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 4.8e-20 102.8 277 35.7
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 4.8e-20 102.8 278 36.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 6.9e-19 99.0 257 37.0
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.0e-18 97.4 94 66.0
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 2.9e-17 93.6 208 35.1
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 2.9e-17 93.6 199 36.2
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 8.5e-17 92.0 228 38.6
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.9e-16 90.9 83 66.3
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 9.4e-16 88.6 279 33.3
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.7e-15 87.0 201 36.8
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.4e-14 84.7 60 71.7
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 6.3e-12 75.9 73 58.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-11 74.3 50 74.0
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 2.5e-08 63.9 178 39.3
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.1e-07 60.8 51 66.7


User provided reference genes

Program Settings