Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 1.1e-20 102.4 55 100.0
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 1.1e-20 102.4 55 100.0
Oeu035754.1 Olea europaea HOM05D009126 ORTHO05D011285 3.8e-13 77.4 53 71.7
Oeu035861.2 Olea europaea HOM05D009126 ORTHO05D011285 5.5e-12 73.6 53 66.0
unitig_21.g20582 Utricularia gibba HOM05D009126 ORTHO05D011285 4.6e-11 70.5 43 76.7
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 6.1e-11 70.1 51 72.5
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 1.8e-10 68.6 52 63.5
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 8.7e-10 66.2 49 65.3
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 1.5e-09 65.5 53 62.3
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 2.5e-09 64.7 34 88.2
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 4.3e-09 63.9 46 67.4
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 2.2e-08 61.6 47 70.2
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 3.7e-08 60.8 46 63.0
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 4.8e-08 60.5 44 65.9
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 6.3e-08 60.1 40 65.0
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 6.3e-08 60.1 40 65.0
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 8.2e-08 59.7 43 62.8
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 1.1e-07 59.3 46 60.9
Potri.005G255701 Populus trichocarpa HOM05D009126 ORTHO05D011285 1.1e-07 59.3 43 65.1
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 1.1e-07 59.3 41 65.9
COL.COLO4_07461 Corchorus olitorius HOM05D009126 ORTHO05D011285 1.4e-07 58.9 51 58.8
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 2.4e-07 58.2 44 68.2
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 2.4e-07 58.2 51 52.9
Lalb_Chr12g0209641 Lupinus albus HOM05D009126 ORTHO05D011285 4.1e-07 57.4 38 68.4
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 6.9e-07 56.6 49 55.1
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 6.9e-07 56.6 50 58.0
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.5e-06 55.5 43 58.1
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 1.5e-06 55.5 35 71.4
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 2.0e-06 55.1 35 71.4
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 3.4e-06 54.3 35 71.4
Lsat_1_v5_gn_2_3141 Lactuca sativa HOM05D009126 ORTHO05D011285 4.5e-06 53.9 44 63.6
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 4.5e-06 53.9 48 54.2


User provided reference genes

Program Settings