Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.9e-104 382.5 191 100.0
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.1e-79 299.3 186 75.3
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 8.9e-78 293.9 189 72.5
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 4.2e-75 285.0 185 71.9
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.1e-64 250.4 186 65.1
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.9e-64 249.6 193 63.7
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 7.4e-64 247.7 156 72.4
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 3.6e-63 245.4 186 59.1
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.2e-63 244.6 187 64.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.8e-62 243.0 189 60.3
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.4e-62 242.7 186 62.4
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.0e-62 241.9 187 63.6
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 7.6e-61 237.7 193 60.6
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 9.9e-61 237.3 181 58.0
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.3e-60 236.9 177 63.3
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.7e-60 236.5 183 61.7
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.2e-60 236.1 169 65.1
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.2e-60 236.1 184 62.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.8e-60 235.3 188 59.0
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 3.8e-60 235.3 184 62.0
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 4.9e-60 235.0 189 57.7
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 4.9e-60 235.0 156 67.3
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 4.9e-60 235.0 188 56.4
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 8.4e-60 234.2 181 57.5
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.1e-59 233.8 182 59.3
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 2.4e-59 232.6 189 56.1
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 2.4e-59 232.6 178 62.9
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 3.2e-59 232.3 185 59.5
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 5.5e-59 231.5 169 63.3
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.5e-59 231.5 167 63.5
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 5.5e-59 231.5 184 58.7
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 9.3e-59 230.7 188 59.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.2e-58 230.3 186 57.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.2e-58 230.3 184 58.2
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 2.7e-58 229.2 191 55.0
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.6e-58 228.4 184 61.4
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 6.0e-58 228.0 194 58.2
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 6.0e-58 228.0 182 58.2
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 1.0e-57 227.3 184 59.2
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.3e-57 226.9 185 56.2
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 3.0e-57 225.7 184 57.1
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.9e-57 225.3 177 61.6
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 5.1e-57 224.9 187 57.2
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 6.7e-57 224.6 187 56.7
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 8.7e-57 224.2 187 55.6
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 8.7e-57 224.2 178 60.1
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 1.1e-56 223.8 182 59.3
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.5e-56 223.4 180 57.2
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.5e-56 223.4 156 62.8
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 1.5e-56 223.4 186 58.1
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.5e-56 222.6 184 53.8
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.5e-56 222.6 181 58.6
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.3e-56 222.2 178 58.4
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 5.6e-56 221.5 182 58.8
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 5.6e-56 221.5 182 58.8
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.3e-55 220.3 184 56.5
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.6e-55 219.9 190 57.9
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.6e-55 219.9 182 58.2
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.6e-55 219.9 186 57.0
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.6e-55 219.9 187 56.1
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.1e-55 219.5 182 55.5
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 3.7e-55 218.8 185 56.8
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 3.7e-55 218.8 211 52.1
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.8e-55 218.4 179 56.4
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 4.8e-55 218.4 186 53.8
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 6.2e-55 218.0 185 57.3
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.2e-55 218.0 178 58.4
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.2e-55 218.0 185 55.1
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 1.1e-54 217.2 185 55.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.4e-54 216.9 196 53.6
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.4e-54 216.9 181 55.8
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 1.8e-54 216.5 190 53.2
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.8e-54 216.5 181 55.8
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.8e-54 216.5 157 61.1
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.4e-54 216.1 150 62.7
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 4.0e-54 215.3 186 57.0
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 5.3e-54 214.9 189 52.4
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 5.3e-54 214.9 181 56.9
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 9.0e-54 214.2 184 53.8
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 1.2e-53 213.8 186 55.4
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.2e-53 213.8 185 55.7
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.2e-53 213.8 182 55.5
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.5e-53 213.4 183 57.9
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 2.0e-53 213.0 182 55.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.0e-53 213.0 186 52.2
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 2.6e-53 212.6 151 62.3
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 3.4e-53 212.2 186 55.9
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 3.4e-53 212.2 185 55.1
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 3.4e-53 212.2 187 51.9
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.0e-52 210.7 182 56.6
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.0e-52 210.7 186 53.8
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.0e-52 210.7 189 53.4
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 2.9e-52 209.1 183 54.6
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 6.5e-52 208.0 172 57.0
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.1e-51 207.2 180 51.1
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.1e-51 207.2 189 55.6
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 4.2e-51 205.3 185 54.6
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 9.3e-51 204.1 180 53.3
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.2e-50 203.8 181 55.2
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 2.1e-50 203.0 180 52.8
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 2.1e-50 203.0 180 52.8
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 7.9e-50 201.1 152 55.3
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.3e-49 200.3 146 58.9
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 8.2e-47 191.0 187 51.9
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 4.2e-43 178.7 183 47.0
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 5.5e-43 178.3 186 46.8
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 7.9e-42 174.5 155 57.4
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 3.9e-41 172.2 192 47.4
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 5.1e-41 171.8 185 44.9
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.5e-40 170.2 164 47.0
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.9e-40 169.9 154 50.0
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.2e-39 166.4 155 48.4
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.2e-39 166.4 155 48.4
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 5.3e-38 161.8 118 64.4
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.5e-37 160.2 187 41.2
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.0e-37 159.8 181 44.2
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 4.2e-35 152.1 119 58.8
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.5e-32 143.7 149 46.3
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.7e-31 139.0 126 53.2
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.8e-31 138.7 88 67.0
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 4.5e-29 132.1 118 52.5
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 8.5e-28 127.9 126 50.0
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 3.6e-26 122.5 100 57.0
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.1e-24 117.5 162 34.0
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 1.4e-22 110.5 77 64.9
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.5e-19 100.5 74 64.9
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 9.4e-19 97.8 67 67.2
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 4.7e-18 95.5 68 60.3
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.7e-18 95.5 98 49.0
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 8.0e-18 94.7 64 65.6
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.0e-17 94.4 142 31.0
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.5e-16 90.5 145 33.8
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 8.2e-15 84.7 135 39.3
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.6e-13 80.5 141 25.5
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 3.6e-10 69.3 61 57.4
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 1.0e-09 67.8 68 47.1


User provided reference genes

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