Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 4.9e-102 374.4 181 100.0
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 6.6e-38 161.4 183 50.8
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.5e-37 159.5 182 49.5
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 2.2e-33 146.4 118 58.5
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 8.3e-33 144.4 113 58.4
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 5.6e-29 131.7 140 45.7
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 3.1e-27 125.9 147 49.7
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 3.1e-27 125.9 147 49.7
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 4.0e-27 125.6 141 49.6
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 4.0e-27 125.6 117 51.3
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 5.2e-27 125.2 132 47.0
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 8.9e-27 124.4 116 53.4
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 1.2e-26 124.0 117 50.4
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.0e-26 123.2 176 42.0
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 2.6e-26 122.9 147 48.3
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 2.6e-26 122.9 121 53.7
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 2.6e-26 122.9 121 53.7
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 2.6e-26 122.9 142 47.2
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 3.4e-26 122.5 121 52.1
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 3.4e-26 122.5 117 53.8
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 5.8e-26 121.7 142 48.6
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 5.8e-26 121.7 142 48.6
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 1.3e-25 120.6 232 33.6
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 1.7e-25 120.2 124 51.6
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 1.7e-25 120.2 159 45.3
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 1.7e-25 120.2 117 51.3
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 2.2e-25 119.8 113 55.8
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.2e-25 119.8 181 43.6
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 2.9e-25 119.4 121 51.2
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 2.9e-25 119.4 232 33.6
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 1.4e-24 117.1 151 40.4
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 1.4e-24 117.1 152 44.7
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.9e-24 116.7 107 51.4
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 2.4e-24 116.3 122 50.8
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 2.4e-24 116.3 141 46.1
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 2.4e-24 116.3 121 45.5
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 3.2e-24 115.9 121 46.3
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 5.4e-24 115.2 111 53.2
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.4e-24 115.2 155 42.6
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 5.4e-24 115.2 112 50.0
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 9.2e-24 114.4 114 50.0
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 1.2e-23 114.0 129 45.0
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-23 114.0 114 50.0
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-23 114.0 114 49.1
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.1e-23 113.2 110 50.0
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 2.7e-23 112.8 201 38.8
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 2.7e-23 112.8 133 42.9
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 3.5e-23 112.5 111 51.4
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 4.6e-23 112.1 115 51.3
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 4.6e-23 112.1 123 49.6
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 7.8e-23 111.3 118 46.6
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.0e-22 110.9 112 49.1
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 1.3e-22 110.5 123 49.6
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 1.7e-22 110.2 114 50.0
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 2.3e-22 109.8 121 50.4
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.3e-22 109.8 128 43.8
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 2.3e-22 109.8 118 44.9
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 3.0e-22 109.4 98 58.2
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 3.9e-22 109.0 118 45.8
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 3.9e-22 109.0 120 45.0
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 5.1e-22 108.6 119 45.4
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 6.6e-22 108.2 120 46.7
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 6.6e-22 108.2 102 50.0
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 8.6e-22 107.8 111 47.7
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 8.6e-22 107.8 111 52.3
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 1.1e-21 107.5 119 48.7
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 1.5e-21 107.1 180 39.4
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 3.3e-21 105.9 110 44.5
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 5.6e-21 105.1 139 42.4
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 5.6e-21 105.1 72 68.1
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 1.6e-20 103.6 119 43.7
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 2.1e-20 103.2 128 43.8
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 3.6e-20 102.4 119 42.9
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 4.7e-20 102.1 72 66.7
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 6.2e-20 101.7 107 44.9
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 1.1e-19 100.9 90 47.8
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 1.1e-19 100.9 113 41.6
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 1.4e-19 100.5 125 41.6
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 1.8e-19 100.1 71 57.7
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 2.3e-19 99.8 137 40.9
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.3e-19 99.8 118 42.4
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 4.0e-19 99.0 66 63.6
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 5.2e-19 98.6 117 41.9
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 5.2e-19 98.6 118 41.5
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.2e-19 98.6 136 41.9
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 5.2e-19 98.6 136 41.9
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.8e-19 98.2 136 41.9
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 1.5e-18 97.1 120 45.8
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 2.0e-18 96.7 107 47.7
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 3.4e-18 95.9 116 43.1
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 3.4e-18 95.9 74 55.4
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.8e-18 95.1 148 37.8
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 1.3e-17 94.0 66 57.6
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 1.3e-17 94.0 117 42.7
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.2e-17 93.2 119 42.9
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 2.9e-17 92.8 67 58.2
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 2.9e-17 92.8 67 58.2
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.9e-17 92.8 145 37.9
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 3.7e-17 92.4 118 42.4
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.4e-17 91.7 119 42.0
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 1.1e-16 90.9 145 37.2
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 1.1e-16 90.9 187 36.9
unitig_578.g16210 Utricularia gibba HOM05D004520 ORTHO05D005520 1.1e-16 90.9 171 37.4
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 1.4e-16 90.5 105 44.8
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 1.4e-16 90.5 112 42.9
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.9e-16 90.1 145 36.6
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 2.4e-16 89.7 82 47.6
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 3.2e-16 89.4 153 39.2
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 9.2e-16 87.8 71 53.5
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-15 87.4 120 39.2
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-15 87.4 120 38.3
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-15 87.4 120 38.3
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 1.2e-15 87.4 64 60.9
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 1.2e-15 87.4 64 60.9
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 1.2e-15 87.4 105 43.8
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 3.5e-15 85.9 88 52.3
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 3.5e-15 85.9 88 52.3
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 4.6e-15 85.5 120 37.5
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 6.0e-15 85.1 114 44.7
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.3e-14 84.0 120 36.7
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 1.7e-14 83.6 64 59.4
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 1.7e-14 83.6 80 46.2
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 2.3e-14 83.2 118 42.4
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 3.9e-14 82.4 105 44.8
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 6.6e-14 81.6 88 51.1
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 1.9e-13 80.1 104 45.2
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 2.5e-13 79.7 97 48.5
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 4.3e-13 79.0 109 44.0
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 4.3e-13 79.0 46 67.4
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 7.3e-13 78.2 59 57.6
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 7.3e-13 78.2 105 44.8
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 1.6e-12 77.0 148 35.8
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 1.6e-12 77.0 148 36.5
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 2.1e-12 76.6 70 50.0
Sp1g19610 Schrenkiella parvula HOM05D004520 ORTHO05D005520 6.2e-12 75.1 89 47.2
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 4.0e-11 72.4 110 38.2
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 8.9e-11 71.2 105 37.1
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 2.6e-10 69.7 160 31.2
SEGI_20648 Sequoiadendron giganteum HOM05D004520 ORTHO05D005520 4.4e-10 68.9 54 55.6
CsaV3_5G023830 Cucumis sativus L. HOM05D004520 ORTHO05D005520 7.6e-10 68.2 161 31.1
Oeu061390.1 Olea europaea HOM05D004520 ORTHO05D005520 2.2e-09 66.6 52 57.7
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 2.9e-09 66.2 109 40.4
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 2.9e-09 66.2 109 40.4
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 4.9e-09 65.5 129 32.6
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 8.4e-09 64.7 83 42.2
Atru.chr3.816 Acer truncatum HOM05D004520 ORTHO05D005520 1.1e-08 64.3 125 36.8
Cfa015930 Carpinus fangiana HOM05D004520 ORTHO05D005520 1.1e-08 64.3 68 48.5
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 3.2e-08 62.8 121 32.2
Ciclev10003675m.g Citrus clementina HOM05D004520 ORTHO05D005520 3.2e-08 62.8 119 34.5
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 5.4e-08 62.0 121 34.7
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 5.4e-08 62.0 112 32.1
PGSC0003DMG400046169 Solanum tuberosum HOM05D004520 ORTHO05D005520 1.7e-06 57.0 65 46.2
ECA232G0105 Erigeron canadensis HOM05D004520 ORTHO05D005520 5.1e-06 55.5 100 37.0
Thecc.09G281500 Theobroma cacao HOM05D004622 ORTHO05D005431 8.7e-06 54.7 101 31.7


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