Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02850 Erythranthe guttata HOM05D032170 ORTHO05D000288 6.4e-51 203.8 100 100.0
Migut.N02851 Erythranthe guttata HOM05D032170 ORTHO05D025321 6.4e-19 97.4 51 88.2
Peaxi162Scf00189g00118 Petunia axillaris HOM05D000247 ORTHO05D000288 4.6e-09 64.7 103 36.9
Nitab4.5_0001861g0160 Nicotiana tabacum HOM05D000247 ORTHO05D000288 7.9e-09 63.9 104 35.6
Nitab4.5_0005779g0020 Nicotiana tabacum HOM05D000247 ORTHO05D000288 7.9e-09 63.9 104 36.5
MSTRG.22318 Avicennia marina HOM05D000247 ORTHO05D000288 1.3e-08 63.2 99 38.4
Phvul.001G010800 Phaseolus vulgaris HOM05D000247 ORTHO05D000288 1.8e-08 62.8 104 37.5
Sc02g0005490 Simmondsia chinensis HOM05D000247 ORTHO05D000288 2.3e-08 62.4 102 35.3
Oeu030606.1 Olea europaea HOM05D000247 ORTHO05D000288 3.0e-08 62.0 99 36.4
CAN.G851.34 Capsicum annuum HOM05D000247 ORTHO05D000288 5.1e-08 61.2 102 35.3
SalBow8G1325 Salvia bowleyana HOM05D000247 ORTHO05D000288 5.1e-08 61.2 99 36.4
SalBow8G3475 Salvia bowleyana HOM05D000247 ORTHO05D000288 5.1e-08 61.2 99 36.4
MSTRG.24273 Avicennia marina HOM05D000247 ORTHO05D000288 6.7e-08 60.8 99 35.4
Migut.C00776 Erythranthe guttata HOM05D000247 ORTHO05D000288 6.7e-08 60.8 99 36.4
TWI09G0553 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 6.7e-08 60.8 104 36.5
PGSC0003DMG400003615 Solanum tuberosum HOM05D000247 ORTHO05D000288 1.1e-07 60.1 104 33.7
SGA_v2.0_scaffold162G37912 Striga asiatica HOM05D000247 ORTHO05D000288 1.1e-07 60.1 99 37.4
Actinidia29804 Actinidia chinensis HOM05D000247 ORTHO05D000288 1.5e-07 59.7 99 36.4
Sopen02g029380 Solanum pennellii HOM05D000247 ORTHO05D000288 1.9e-07 59.3 104 33.7
EL10Ac1g00593 Beta vulgaris HOM05D000247 ORTHO05D000288 2.5e-07 58.9 106 32.1
Ciclev10002859m.g Citrus clementina HOM05D000247 ORTHO05D000288 3.3e-07 58.5 99 33.3
MSTRG.23268 Avicennia marina HOM05D000247 ORTHO05D000288 4.3e-07 58.2 102 33.3
CANSAT11G2653 Cannabis sativa HOM05D000247 ORTHO05D000288 4.3e-07 58.2 97 39.2
Gorai.007G198800 Gossypium raimondii HOM05D000247 ORTHO05D000288 4.3e-07 58.2 105 35.2
THA.LOC104808018 Tarenaya hassleriana HOM05D000247 ORTHO05D000288 4.3e-07 58.2 99 36.4
Cc10_g02320 Coffea canephora HOM05D000247 ORTHO05D000288 5.7e-07 57.8 103 32.0
FAN20G1614 Fragaria x ananassa HOM05D000247 ORTHO05D000288 5.7e-07 57.8 101 35.6
MSTRG.1242 Avicennia marina HOM05D000247 ORTHO05D000288 7.4e-07 57.4 99 34.3
COL.COLO4_21989 Corchorus olitorius HOM05D000247 ORTHO05D000288 7.4e-07 57.4 104 34.6
FvH4_2g39210 Fragaria vesca HOM05D000247 ORTHO05D000288 7.4e-07 57.4 101 34.7
Gohir.A11G179200 Gossypium hirsutum HOM05D000247 ORTHO05D000288 7.4e-07 57.4 106 34.9
Nitab4.5_0000723g0030 Nicotiana tabacum HOM05D000247 ORTHO05D000288 7.4e-07 57.4 104 33.7
Solyc02g084710.3 Solanum lycopersicum HOM05D000247 ORTHO05D000288 7.4e-07 57.4 104 32.7
Aa31LG4G19140 Aethionema arabicum HOM05D000247 ORTHO05D000288 9.6e-07 57.0 100 37.0
CiPaw.07G054000 Carya illinoinensis HOM05D000247 ORTHO05D000288 9.6e-07 57.0 103 35.0
Haze_22564 Corylus avellana HOM05D000247 ORTHO05D000288 9.6e-07 57.0 104 33.7
FAN27G1951 Fragaria x ananassa HOM05D000247 ORTHO05D000288 9.6e-07 57.0 101 35.6
PGSC0003DMG400003755 Solanum tuberosum HOM05D000247 ORTHO05D000288 9.6e-07 57.0 108 34.3
Nn1g05780 Nelumbo nucifera HOM05D000247 ORTHO05D000288 1.3e-06 56.6 100 34.0
Thecc.01G025800 Theobroma cacao HOM05D000247 ORTHO05D000288 1.3e-06 56.6 104 34.6
TPR.G30479 Trifolium pratense HOM05D000247 ORTHO05D000288 1.3e-06 56.6 102 33.3
A09p44130 Brassica napus HOM05D000247 ORTHO05D000288 1.6e-06 56.2 101 35.6
BolC8t50251H Brassica oleracea HOM05D000247 ORTHO05D000288 1.6e-06 56.2 101 35.6
BraA09t39872Z Brassica rapa HOM05D000247 ORTHO05D000288 1.6e-06 56.2 101 35.6
Cfa013887 Carpinus fangiana HOM05D000247 ORTHO05D000288 1.6e-06 56.2 104 33.7
Thhalv10010795m.g Eutrema salsugineum HOM05D000247 ORTHO05D000288 1.6e-06 56.2 101 35.6
MBI01_g12891_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D000288 1.6e-06 56.2 102 33.3
MD15G1251000 Malus domestica HOM05D000247 ORTHO05D000288 1.6e-06 56.2 104 33.7
Oeu030409.1 Olea europaea HOM05D000247 ORTHO05D000288 1.6e-06 56.2 104 33.7
Prupe.7G163200 Prunus persica HOM05D000247 ORTHO05D000288 1.6e-06 56.2 106 32.1
Sopen04g034440 Solanum pennellii HOM05D000247 ORTHO05D000288 1.6e-06 56.2 108 33.3
Atru.chr3.741 Acer truncatum HOM05D000247 ORTHO05D000288 2.1e-06 55.8 104 32.7
Aa31LG2G10500 Aethionema arabicum HOM05D000247 ORTHO05D000288 2.1e-06 55.8 98 34.7
CDE06G0052 Ceratophyllum demersum HOM05D000247 ORTHO05D000288 2.1e-06 55.8 99 34.3
Duzib147G0827 Durio zibethinus HOM05D000247 ORTHO05D000288 2.1e-06 55.8 103 35.0
FAN15G2393 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.1e-06 55.8 101 35.6
Gohir.D11G186900 Gossypium hirsutum HOM05D000247 ORTHO05D000288 2.1e-06 55.8 106 34.0
QL02p010329 Quercus lobata HOM05D000247 ORTHO05D000288 2.1e-06 55.8 102 33.3
RcHm_v2.0_Chr6g0301861 Rosa chinensis HOM05D000247 ORTHO05D000288 2.1e-06 55.8 103 33.0
Aqoxy6G01224 Aquilegia oxysepala HOM05D000247 ORTHO05D000288 2.8e-06 55.5 103 33.0
BcaC07g39581 Brassica carinata HOM05D000247 ORTHO05D000288 2.8e-06 55.5 101 35.6
C08p26330 Brassica napus HOM05D000247 ORTHO05D000288 2.8e-06 55.5 101 35.6
Carub.0005s1743 Capsella rubella HOM05D000247 ORTHO05D000288 2.8e-06 55.5 101 35.6
CARHR160610 Cardamine hirsuta HOM05D000247 ORTHO05D000288 2.8e-06 55.5 101 35.6
AUR62026469 Chenopodium quinoa HOM05D000247 ORTHO05D000288 2.8e-06 55.5 97 29.9
Haze_03830 Corylus avellana HOM05D002748 ORTHO05D002947 2.8e-06 55.5 103 33.0
AL5G31450 Arabidopsis lyrata HOM05D000247 ORTHO05D000288 3.7e-06 55.1 101 35.6
AT3G51030 Arabidopsis thaliana HOM05D000247 ORTHO05D000288 3.7e-06 55.1 101 35.6
BcaB01g00552 Brassica carinata HOM05D000247 ORTHO05D000288 3.7e-06 55.1 101 35.6
AUR62026280 Chenopodium quinoa HOM05D000247 ORTHO05D000288 3.7e-06 55.1 97 29.9
Nitab4.5_0003460g0050 Nicotiana tabacum HOM05D000247 ORTHO05D000288 3.7e-06 55.1 104 31.7
Prupe.1G373000 Prunus persica HOM05D000247 ORTHO05D000288 3.7e-06 55.1 105 33.3
Hund26882 Selenicereus undatus HOM05D000247 ORTHO05D000288 3.7e-06 55.1 103 35.0
Solyc04g080850.3 Solanum lycopersicum HOM05D000247 ORTHO05D000288 3.7e-06 55.1 108 33.3
vmacro21689 Vaccinium macrocarpon HOM05D000247 ORTHO05D000288 3.7e-06 55.1 99 34.3
A03p48090 Brassica napus HOM05D000247 ORTHO05D000288 4.8e-06 54.7 101 34.7
A04p33730 Brassica napus HOM05D000247 ORTHO05D000288 4.8e-06 54.7 102 34.3
BraA03t13916Z Brassica rapa HOM05D000247 ORTHO05D000288 4.8e-06 54.7 101 34.7
CiPaw.07G155900 Carya illinoinensis HOM05D000247 ORTHO05D000288 4.8e-06 54.7 104 32.7
Migut.H02500 Erythranthe guttata HOM05D000247 ORTHO05D000288 4.8e-06 54.7 106 33.0
QL10p007366 Quercus lobata HOM05D000247 ORTHO05D000288 4.8e-06 54.7 104 31.7
SalBow2G0735 Salvia bowleyana HOM05D000247 ORTHO05D000288 4.8e-06 54.7 97 32.0
THA.LOC104822839 Tarenaya hassleriana HOM05D000247 ORTHO05D000288 4.8e-06 54.7 104 34.6
TWI60G1617 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 4.8e-06 54.7 103 33.0
TAR633G0549 Trochodendron aralioides HOM05D000247 ORTHO05D000288 4.8e-06 54.7 103 32.0
GSVIVG01032600001 Vitis vinifera HOM05D000247 ORTHO05D000288 4.8e-06 54.7 103 34.0
BolC7t45127H Brassica oleracea HOM05D000247 ORTHO05D000288 6.2e-06 54.3 101 33.7
BraA04t18835Z Brassica rapa HOM05D000247 ORTHO05D000288 6.2e-06 54.3 97 35.1
Medtr1g023140 Medicago truncatula HOM05D000247 ORTHO05D000288 6.2e-06 54.3 99 32.3
Ah.02g131970 Amaranthus hybridus HOM05D000247 ORTHO05D000288 8.2e-06 53.9 98 34.7
CSS0037489 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D000288 8.2e-06 53.9 99 33.3
Glyma.14G070500 Glycine max HOM05D000247 ORTHO05D000288 8.2e-06 53.9 106 32.1
MD09G1045800 Malus domestica HOM05D000247 ORTHO05D000288 8.2e-06 53.9 100 35.0
Sp5g11180 Schrenkiella parvula HOM05D000247 ORTHO05D000288 8.2e-06 53.9 101 34.7
Sc15g0003390 Simmondsia chinensis HOM05D000247 ORTHO05D000288 8.2e-06 53.9 107 30.8
Zm00001eb292340 Zea mays HOM05D000247 ORTHO05D000288 8.2e-06 53.9 102 30.4


User provided reference genes

Program Settings