Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 6.5e-90 334.0 158 100.0
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 2.3e-55 219.2 167 65.3
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 3.5e-35 152.1 160 48.8
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 7.7e-35 151.0 155 49.7
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.0e-34 150.6 159 48.4
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 1.9e-33 146.4 171 45.6
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 8.0e-32 141.0 160 45.6
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 8.0e-32 141.0 160 45.6
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 2.3e-31 139.4 162 43.2
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 5.7e-30 134.8 171 42.7
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 2.2e-29 132.9 162 41.4
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 1.4e-28 130.2 160 43.8
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 3.2e-28 129.0 158 42.4
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 1.2e-27 127.1 165 41.2
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 2.0e-27 126.3 168 42.3
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 3.5e-27 125.6 152 44.7
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 4.6e-27 125.2 150 44.7
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 4.6e-27 125.2 164 41.5
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 5.9e-27 124.8 166 37.3
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 7.8e-27 124.4 152 40.8
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.3e-26 123.6 159 42.1
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.3e-26 123.6 162 38.9
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.3e-26 122.9 160 42.5
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 3.9e-26 122.1 144 42.4
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 5.0e-26 121.7 160 42.5
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 8.6e-26 120.9 144 42.4
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 8.6e-26 120.9 160 42.5
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 1.5e-25 120.2 152 40.1
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 2.5e-25 119.4 153 39.9
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 4.3e-25 118.6 163 41.1
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 4.3e-25 118.6 160 41.9
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.6e-25 118.2 140 42.9
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 7.3e-25 117.9 143 39.2
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 1.6e-24 116.7 164 40.9
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 6.2e-24 114.8 158 41.1
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 8.0e-24 114.4 161 41.0
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 8.0e-24 114.4 171 36.8
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 1.8e-23 113.2 156 38.5
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.8e-23 113.2 166 36.7
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 2.3e-23 112.8 155 42.6
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 5.2e-23 111.7 158 39.9
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 3.4e-22 109.0 156 38.5
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 7.5e-22 107.8 165 37.0
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 9.8e-22 107.5 153 39.2
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 9.8e-22 107.5 153 39.2
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 9.8e-22 107.5 155 36.8
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 2.2e-21 106.3 154 41.6
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 2.2e-21 106.3 156 37.8
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.4e-20 103.6 157 36.9
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 1.9e-20 103.2 155 36.8
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 2.4e-20 102.8 168 36.9
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 3.2e-20 102.4 156 37.2
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 3.2e-20 102.4 145 38.6
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 4.1e-20 102.1 104 51.0
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 4.1e-20 102.1 139 40.3
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 9.2e-20 100.9 144 39.6
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 9.2e-20 100.9 155 36.8
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.6e-19 100.1 156 36.5
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.7e-19 99.4 162 35.2
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 7.8e-19 97.8 162 34.6
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 7.8e-19 97.8 149 35.6
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 7.8e-19 97.8 134 37.3
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 6.6e-18 94.7 127 36.2
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 8.6e-18 94.4 124 42.7
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 4.3e-17 92.0 147 35.4
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 5.6e-17 91.7 94 46.8
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 1.9e-12 76.6 84 41.7
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 2.7e-11 72.8 101 39.6
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 2.3e-10 69.7 146 32.2
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.9e-10 68.9 129 31.8
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 1.5e-09 67.0 98 35.7
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 8.1e-08 61.2 152 28.3
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.8e-07 60.1 158 26.6
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 3.1e-07 59.3 138 27.5
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 8.9e-07 57.8 154 26.0
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 8.9e-07 57.8 136 27.9
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 2.6e-06 56.2 159 25.2
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 3.4e-06 55.8 159 27.7
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 3.4e-06 55.8 159 27.7
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 3.4e-06 55.8 130 24.6
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 5.8e-06 55.1 159 27.0
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 5.8e-06 55.1 159 27.0
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 9.9e-06 54.3 159 26.4


User provided reference genes

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