Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02795 Erythranthe guttata HOM05D001756 ORTHO05D001581 1.9e-30 135.2 67 100.0
SalBow2G0436 Salvia bowleyana HOM05D001756 ORTHO05D001581 5.6e-11 70.5 68 52.9
SalBow2G3148 Salvia bowleyana HOM05D001756 ORTHO05D001581 5.6e-11 70.5 68 52.9
Lsat_1_v5_gn_3_86460 Lactuca sativa HOM05D001756 ORTHO05D001581 1.2e-08 62.8 65 49.2
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 1.5e-08 62.4 70 50.0
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 2.0e-08 62.0 67 47.8
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 2.0e-08 62.0 69 46.4
RcHm_v2.0_Chr6g0248481 Rosa chinensis HOM05D001756 ORTHO05D001581 2.6e-08 61.6 72 47.2
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 3.4e-08 61.2 72 45.8
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.4e-08 61.2 67 49.3
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.4e-08 61.2 67 49.3
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 3.4e-08 61.2 65 49.2
CSS0036107 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.5e-08 60.8 73 43.8
SalBow3G1129 Salvia bowleyana HOM05D001756 ORTHO05D001581 5.8e-08 60.5 64 48.4
CSS0026516 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.6e-08 60.1 69 46.4
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 7.6e-08 60.1 60 51.7
Eucgr.I02494 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.0e-07 59.7 49 53.1
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.0e-07 59.7 61 50.8
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 1.3e-07 59.3 52 53.8
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.3e-07 59.3 64 48.4
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.7e-07 58.9 66 50.0
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.7e-07 58.9 66 51.5
Actinidia04395 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.2e-07 58.5 60 48.3
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 2.2e-07 58.5 52 55.8
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 2.2e-07 58.5 52 55.8
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 2.2e-07 58.5 69 50.7
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 2.2e-07 58.5 64 46.9
TWI74G0998 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 2.2e-07 58.5 42 59.5
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 2.9e-07 58.2 52 55.8
FAN23G1434 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.9e-07 58.2 71 45.1
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 2.9e-07 58.2 57 52.6
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 2.9e-07 58.2 68 47.1
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.8e-07 57.8 69 49.3
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.8e-07 57.8 69 49.3
CSS0048277 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.8e-07 57.8 69 42.0
CSS0049317 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.8e-07 57.8 69 42.0
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 3.8e-07 57.8 48 50.0
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 3.8e-07 57.8 48 50.0
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.9e-07 57.4 71 45.1
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 4.9e-07 57.4 71 42.3
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 4.9e-07 57.4 69 46.4
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 6.5e-07 57.0 61 49.2
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 6.5e-07 57.0 52 53.8
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 6.5e-07 57.0 69 50.7
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 6.5e-07 57.0 68 48.5
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 6.5e-07 57.0 73 49.3
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 6.5e-07 57.0 69 47.8
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 8.4e-07 56.6 67 44.8
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 8.4e-07 56.6 64 50.0
FvH4_1g18100 Fragaria vesca HOM05D001756 ORTHO05D001581 8.4e-07 56.6 36 69.4
FAN19G1808 Fragaria x ananassa HOM05D001756 ORTHO05D001581 8.4e-07 56.6 36 69.4
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 8.4e-07 56.6 69 47.8
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 8.4e-07 56.6 71 39.4
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 8.4e-07 56.6 70 48.6
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 8.4e-07 56.6 69 44.9
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 8.4e-07 56.6 63 46.0
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 1.1e-06 56.2 70 42.9
ECA232G1256 Erigeron canadensis HOM05D000549 ORTHO05D008331 1.1e-06 56.2 65 43.1
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.1e-06 56.2 70 42.9
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.1e-06 56.2 70 42.9
Phvul.003G233400 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 1.1e-06 56.2 61 47.5
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.1e-06 56.2 70 42.9
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.1e-06 56.2 59 49.2
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.4e-06 55.8 68 47.1
arahy.Tifrunner.gnm1.ann1.KSYJ7I Arachis hypogaea HOM05D001756 ORTHO05D001581 1.4e-06 55.8 60 46.7
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 1.4e-06 55.8 70 51.4
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 1.4e-06 55.8 72 41.7
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 1.4e-06 55.8 71 40.8
FAN27G0458 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.4e-06 55.8 72 43.1
Glyma.05G107800 Glycine max HOM05D001756 ORTHO05D001581 1.4e-06 55.8 54 53.7
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.4e-06 55.8 35 68.6
Nitab4.5_0002525g0020 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.4e-06 55.8 68 42.6
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.9e-06 55.5 69 43.5
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.9e-06 55.5 63 44.4
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.9e-06 55.5 63 44.4
Manes.18G048700 Manihot esculenta HOM05D001756 ORTHO05D001581 1.9e-06 55.5 64 50.0
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.9e-06 55.5 70 40.0
Actinidia19298 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.5e-06 55.1 66 42.4
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 2.5e-06 55.1 71 42.3
Glyma.17G159000 Glycine max HOM05D001756 ORTHO05D001581 2.5e-06 55.1 63 47.6
HanXRQChr08g0233231 Helianthus annuus HOM05D001756 ORTHO05D001581 2.5e-06 55.1 59 49.2
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 2.5e-06 55.1 59 47.5
Hma1.2p1_0210F.1_g089330 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 2.5e-06 55.1 65 44.6
MBI16_g16475_MAGBIO Magnolia biondii HOM05D001756 ORTHO05D001581 2.5e-06 55.1 65 49.2
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 2.5e-06 55.1 63 46.0
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 2.5e-06 55.1 73 43.8
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 2.5e-06 55.1 72 45.8
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 3.2e-06 54.7 53 54.7
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 4.2e-06 54.3 74 40.5
Glyma.11G046000 Glycine max HOM05D001756 ORTHO05D001581 4.2e-06 54.3 62 46.8
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.2e-06 54.3 65 44.6
Lsat_1_v5_gn_2_80201 Lactuca sativa HOM05D001756 ORTHO05D001581 4.2e-06 54.3 38 63.2
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 4.2e-06 54.3 34 64.7
MBI16_g32087_MAGBIO Magnolia biondii HOM05D001756 ORTHO05D001581 4.2e-06 54.3 65 49.2
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 4.2e-06 54.3 70 45.7
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.2e-06 54.3 70 38.6
THA.LOC104825794 Tarenaya hassleriana HOM05D001756 ORTHO05D015390 4.2e-06 54.3 66 45.5
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.5e-06 53.9 70 41.4
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 5.5e-06 53.9 67 43.3
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 5.5e-06 53.9 32 75.0
MD02G1189200 Malus domestica HOM05D001756 ORTHO05D001581 5.5e-06 53.9 53 52.8
Nn5g30652 Nelumbo nucifera HOM05D001756 ORTHO05D001581 5.5e-06 53.9 66 43.9
PGR042G3192 Punica granatum HOM05D001756 ORTHO05D001581 5.5e-06 53.9 64 46.9
Sc08g0004340 Simmondsia chinensis HOM05D001756 ORTHO05D001581 5.5e-06 53.9 65 47.7
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 5.5e-06 53.9 27 81.5
GSVIVG01009309001 Vitis vinifera HOM05D001756 ORTHO05D001581 5.5e-06 53.9 70 42.9
arahy.Tifrunner.gnm1.ann1.GJCV3J Arachis hypogaea HOM05D001756 ORTHO05D001581 7.1e-06 53.5 68 45.6
BcaB02g09903 Brassica carinata HOM05D001756 ORTHO05D001581 7.1e-06 53.5 64 50.0
BcaC01g02826 Brassica carinata HOM05D001756 ORTHO05D001581 7.1e-06 53.5 69 44.9
A06p32720 Brassica napus HOM05D001756 ORTHO05D001581 7.1e-06 53.5 69 44.9
BraA06t26202Z Brassica rapa HOM05D001756 ORTHO05D001581 7.1e-06 53.5 69 44.9
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 7.1e-06 53.5 64 46.9
CDE07G1240 Ceratophyllum demersum HOM05D001756 ORTHO05D001581 7.1e-06 53.5 68 42.6
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 7.1e-06 53.5 69 43.5
Manes.13G109600 Manihot esculenta HOM05D001756 ORTHO05D001581 7.1e-06 53.5 35 65.7
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 7.1e-06 53.5 71 39.4
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 7.1e-06 53.5 73 43.8
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 7.1e-06 53.5 71 43.7
BolC3t18241H Brassica oleracea HOM05D001756 ORTHO05D001581 9.3e-06 53.1 69 43.5
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 9.3e-06 53.1 63 42.9
ECA232G3401 Erigeron canadensis HOM05D001756 ORTHO05D001581 9.3e-06 53.1 71 42.3
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.3e-06 53.1 75 40.0
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 9.3e-06 53.1 74 44.6
Medtr1g017590 Medicago truncatula HOM05D001756 ORTHO05D001581 9.3e-06 53.1 73 42.5
Medtr1g017700 Medicago truncatula HOM05D001756 ORTHO05D001581 9.3e-06 53.1 70 42.9
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 9.3e-06 53.1 70 48.6
GSVIVG01004437001 Vitis vinifera HOM05D001756 ORTHO05D001581 9.3e-06 53.1 69 42.0


User provided reference genes

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