Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02788 Erythranthe guttata HOM05D005715 ORTHO05D007160 9.4e-98 360.1 177 100.0
MSTRG.22219 Avicennia marina HOM05D005715 ORTHO05D007160 4.6e-44 181.8 136 72.1
MSTRG.24379 Avicennia marina HOM05D005715 ORTHO05D007160 3.0e-43 179.1 136 70.6
Oeu053093.1 Olea europaea HOM05D005715 ORTHO05D007160 9.6e-34 147.5 136 61.0
Oeu053625.1 Olea europaea HOM05D005715 ORTHO05D007160 1.1e-32 144.1 115 66.1
Duzib093G0740 Durio zibethinus HOM05D005715 ORTHO05D007160 1.3e-30 137.1 114 66.7
SGA_v2.0_scaffold28G11837 Striga asiatica HOM05D005715 ORTHO05D007160 3.8e-30 135.6 105 67.6
Thecc.08G087700 Theobroma cacao HOM05D005715 ORTHO05D007160 9.3e-29 131.0 115 65.2
Manes.18G047200 Manihot esculenta HOM05D005715 ORTHO05D007160 6.7e-27 124.8 159 48.4
Ciclev10001560m.g Citrus clementina HOM05D005715 ORTHO05D007160 1.6e-25 120.2 143 52.4
QL12p038205 Quercus lobata HOM05D005715 ORTHO05D007160 2.1e-25 119.8 115 60.0
Peaxi162Scf00081g00232 Petunia axillaris HOM05D005715 ORTHO05D007160 3.7e-25 119.0 141 53.9
Cfa013768 Carpinus fangiana HOM05D005715 ORTHO05D007160 4.8e-25 118.6 95 66.3
CiPaw.08G050600 Carya illinoinensis HOM05D005715 ORTHO05D007160 6.2e-25 118.2 114 57.9
Haze_22425 Corylus avellana HOM05D005715 ORTHO05D007160 6.2e-25 118.2 96 64.6
Nitab4.5_0000497g0110 Nicotiana tabacum HOM05D005715 ORTHO05D007160 1.4e-24 117.1 141 52.5
Gohir.A05G210700 Gossypium hirsutum HOM05D005715 ORTHO05D007160 3.1e-24 115.9 115 58.3
QL05p065482 Quercus lobata HOM05D005715 ORTHO05D007160 3.1e-24 115.9 115 59.1
Gorai.009G220700 Gossypium raimondii HOM05D005715 ORTHO05D007160 4.0e-24 115.5 115 58.3
Nitab4.5_0003725g0050 Nicotiana tabacum HOM05D005715 ORTHO05D007160 6.9e-24 114.8 137 52.6
Prupe.1G421700 Prunus persica HOM05D005715 ORTHO05D007160 3.4e-23 112.5 118 60.2
Lj4C71T16 Lonicera japonica HOM05D005715 ORTHO05D007160 4.5e-23 112.1 121 52.9
Potri.002G117700 Populus trichocarpa HOM05D005715 ORTHO05D007160 4.5e-23 112.1 115 56.5
Glyma.14G089033 Glycine max HOM05D005715 ORTHO05D007160 1.3e-22 110.5 116 56.0
Cpa.g.sc142.38 Carica papaya HOM05D005715 ORTHO05D007160 2.2e-22 109.8 136 52.2
PGSC0003DMG400010622 Solanum tuberosum HOM05D005715 ORTHO05D007160 2.2e-22 109.8 107 57.9
RcHm_v2.0_Chr6g0309781 Rosa chinensis HOM05D005715 ORTHO05D007160 2.9e-22 109.4 118 58.5
COL.COLO4_28493 Corchorus olitorius HOM05D005715 ORTHO05D007160 3.8e-22 109.0 100 65.0
FvH4_2g32940 Fragaria vesca HOM05D005715 ORTHO05D007160 6.5e-22 108.2 132 55.3
Eucgr.F02242 Eucalyptus grandis HOM05D005715 ORTHO05D007160 8.4e-22 107.8 124 54.8
FAN27G0384 Fragaria x ananassa HOM05D005715 ORTHO05D007160 1.1e-21 107.5 132 55.3
Solyc04g077740.1 Solanum lycopersicum HOM05D005715 ORTHO05D007160 1.1e-21 107.5 107 57.0
Sopen04g031360 Solanum pennellii HOM05D005715 ORTHO05D007160 1.1e-21 107.5 107 57.0
FAN24G0894 Fragaria x ananassa HOM05D005715 ORTHO05D007160 1.9e-21 106.7 132 54.5
Dinv44948 Davidia involucrata HOM05D005715 ORTHO05D007160 3.2e-21 105.9 102 58.8
Gohir.D05G214000 Gossypium hirsutum HOM05D005715 ORTHO05D007160 4.2e-21 105.5 110 57.3
CAN.G724.34 Capsicum annuum HOM05D005715 ORTHO05D007160 5.5e-21 105.1 138 48.6
TWI12G0318 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 7.1e-21 104.8 120 50.0
FAN15G0086 Fragaria x ananassa HOM05D005715 ORTHO05D007160 9.3e-21 104.4 132 54.5
Glyma.17G234300 Glycine max HOM05D005715 ORTHO05D007160 9.3e-21 104.4 121 52.1
Medtr1g017920 Medicago truncatula HOM05D005715 ORTHO05D007160 1.2e-20 104.0 115 52.2
CSS0034937 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 1.6e-20 103.6 117 53.8
CSS0039747 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 1.6e-20 103.6 117 53.8
FAN20G0332 Fragaria x ananassa HOM05D005715 ORTHO05D007160 2.1e-20 103.2 132 53.8
VMungo0647G0294 Vigna mungo HOM05D005715 ORTHO05D007160 2.1e-20 103.2 115 57.4
PGR031G1686 Punica granatum HOM05D005715 ORTHO05D007160 2.7e-20 102.8 95 63.2
HanXRQChr15g0495001 Helianthus annuus HOM05D005715 ORTHO05D007160 6.0e-20 101.7 145 46.9
Lalb_Chr22g0355691 Lupinus albus HOM05D005715 ORTHO05D007160 6.0e-20 101.7 136 47.1
TPR.G12997 Trifolium pratense HOM05D005715 ORTHO05D007160 6.0e-20 101.7 113 52.2
Phvul.001G028500 Phaseolus vulgaris HOM05D005715 ORTHO05D007160 7.9e-20 101.3 115 53.0
Rhsim06G0062800 Rhododendron simsii HOM05D005715 ORTHO05D007160 1.0e-19 100.9 145 49.0
Sabra02G0092400 Salix brachista HOM05D005715 ORTHO05D007160 1.3e-19 100.5 119 52.1
TWI56G0918 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 1.3e-19 100.5 115 53.0
Lj5g0027881 Lotus japonicus HOM05D005715 ORTHO05D007160 2.3e-19 99.8 153 45.8
CANSAT25G3138 Cannabis sativa HOM05D005715 ORTHO05D007160 3.0e-19 99.4 156 45.5
MD08G1080800 Malus domestica HOM05D005715 ORTHO05D007160 3.9e-19 99.0 139 48.9
Psat6g017920 Pisum sativum HOM05D005715 ORTHO05D007160 3.9e-19 99.0 145 44.8
Potri.014G015300 Populus trichocarpa HOM05D005715 ORTHO05D007160 3.9e-19 99.0 136 48.5
SGA_v2.0_scaffold152G36807 Striga asiatica HOM05D005715 ORTHO05D007160 5.1e-19 98.6 72 70.8
Dinv39217 Davidia involucrata HOM05D005715 ORTHO05D007160 1.3e-17 94.0 155 45.8
Lalb_Chr14g0368141 Lupinus albus HOM05D005715 ORTHO05D007160 1.6e-17 93.6 113 52.2
Lalb_Chr24g0399501 Lupinus albus HOM05D005715 ORTHO05D007160 6.2e-17 91.7 113 47.8
Gorai.010G026200 Gossypium raimondii HOM05D005715 ORTHO05D007160 1.8e-16 90.1 91 58.2
ClCG05G020660 Citrullus lanatus HOM05D005715 ORTHO05D007160 1.2e-15 87.4 87 56.3
Gohir.A06G024500 Gossypium hirsutum HOM05D005715 ORTHO05D007160 2.0e-15 86.7 91 57.1
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 3.4e-15 85.9 119 47.9
Carub.0001s2602 Capsella rubella HOM05D005715 ORTHO05D007160 3.4e-15 85.9 152 39.5
EL10Ac1g02368 Beta vulgaris HOM05D005715 ORTHO05D007160 4.5e-15 85.5 79 58.2
BcaC01g01604 Brassica carinata HOM05D005715 ORTHO05D007160 5.8e-15 85.1 119 47.9
C03p74190 Brassica napus HOM05D005715 ORTHO05D007160 5.8e-15 85.1 119 47.9
Ah.05g167050 Amaranthus hybridus HOM05D005715 ORTHO05D007160 7.6e-15 84.7 86 53.5
Aa31LG7G10200 Aethionema arabicum HOM05D005715 ORTHO05D007160 1.7e-14 83.6 148 38.5
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 2.9e-14 82.8 154 38.3
CARHR027070 Cardamine hirsuta HOM05D005715 ORTHO05D007160 2.9e-14 82.8 137 41.6
BcaC05g26749 Brassica carinata HOM05D005715 ORTHO05D007160 3.8e-14 82.4 124 46.0
BcaC05g26750 Brassica carinata HOM05D005715 ORTHO05D007160 3.8e-14 82.4 124 46.0
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 6.5e-14 81.6 154 37.7
AT1G27461 Arabidopsis thaliana HOM05D005715 ORTHO05D007160 8.4e-14 81.3 123 42.3
MELO3C016824.2 Cucumis melo HOM05D005715 ORTHO05D007160 1.1e-13 80.9 88 54.5
A08p26250 Brassica napus HOM05D005715 ORTHO05D007160 1.4e-13 80.5 120 45.8
BraA08t34576Z Brassica rapa HOM05D005715 ORTHO05D007160 1.4e-13 80.5 120 45.8
AL1G40890 Arabidopsis lyrata HOM05D005715 ORTHO05D007160 5.5e-13 78.6 124 41.9
BcaC05g26566 Brassica carinata HOM05D005715 ORTHO05D007160 5.5e-13 78.6 157 38.2
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 5.5e-13 78.6 157 38.2
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 5.5e-13 78.6 157 38.2
SHI08419 Sapria himalayana HOM05D005715 ORTHO05D000023 7.2e-13 78.2 87 56.3
THA.LOC104825172 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 7.2e-13 78.2 137 40.1
Gohir.D06G021600 Gossypium hirsutum HOM05D005715 ORTHO05D007160 1.6e-12 77.0 68 61.8
Actinidia10205 Actinidia chinensis HOM05D005715 ORTHO05D007160 2.1e-12 76.6 148 40.5
ECA232G0180 Erigeron canadensis HOM05D005715 ORTHO05D007160 3.5e-12 75.9 112 42.9
Thhalv10009308m.g Eutrema salsugineum HOM05D005715 ORTHO05D007160 4.6e-12 75.5 161 34.8
Sc02g0007950 Simmondsia chinensis HOM05D005715 ORTHO05D007160 4.6e-12 75.5 91 50.5
THA.LOC104825782 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 6.1e-12 75.1 100 45.0
arahy.Tifrunner.gnm1.ann1.3URM83 Arachis hypogaea HOM05D005715 ORTHO05D009860 1.0e-11 74.3 95 49.5
BcaC01g06948 Brassica carinata HOM05D005715 ORTHO05D007160 1.0e-11 74.3 142 41.5
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 1.3e-11 73.9 91 50.5
arahy.Tifrunner.gnm1.ann1.42CAD1 Arachis hypogaea HOM05D005715 ORTHO05D007160 2.3e-11 73.2 93 49.5
DCAR_008858 Daucus carota HOM05D005715 ORTHO05D007160 5.1e-11 72.0 89 48.3
Sed0010783 Sechium edule HOM05D005715 ORTHO05D007160 6.7e-11 71.6 88 53.4
TAR628G0320 Trochodendron aralioides HOM05D005715 ORTHO05D007160 6.7e-11 71.6 105 45.7
Sp1g23710 Schrenkiella parvula HOM05D005715 ORTHO05D007160 9.7e-10 67.8 77 53.2
Lj1g0016682 Lotus japonicus HOM05D005715 ORTHO05D007160 1.3e-09 67.4 88 44.3
GSVIVG01009335001 Vitis vinifera HOM05D005715 ORTHO05D007160 1.3e-09 67.4 116 40.5
DCAR_012819 Daucus carota HOM05D005715 ORTHO05D007160 1.6e-09 67.0 87 49.4
Lj4P757T25 Lonicera japonica HOM05D005715 ORTHO05D007160 6.3e-09 65.1 100 45.0
Nn5g30612 Nelumbo nucifera HOM05D005715 ORTHO05D007160 5.3e-08 62.0 120 40.8


User provided reference genes

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