Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 8.2e-268 926.4 440 100.0
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.1e-198 696.8 456 74.1
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 9.6e-184 647.1 445 70.1
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.9e-180 635.6 442 68.6
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 8.7e-161 570.9 456 61.6
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 8.2e-159 564.3 456 61.4
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 2.4e-158 562.8 455 60.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.2e-156 556.2 452 60.2
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.5e-156 554.7 450 59.1
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.9e-153 545.4 453 59.4
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 6.7e-153 544.7 450 60.4
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.5e-152 542.7 450 58.2
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 5.7e-152 541.6 450 60.2
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 9.7e-152 540.8 451 57.4
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 3.7e-151 538.9 454 57.9
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.1e-150 535.4 453 55.8
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 6.9e-150 534.6 454 56.4
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.4e-149 532.3 452 58.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.0e-148 530.8 450 58.4
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.7e-148 530.0 454 55.9
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.2e-148 529.6 443 58.9
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.2e-148 529.6 454 57.5
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 3.8e-148 528.9 460 57.2
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.0e-148 528.5 460 55.7
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.9e-147 526.6 460 55.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 3.6e-146 522.3 458 55.2
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.5e-144 516.9 447 56.4
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.8e-142 510.0 462 53.9
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.4e-142 509.6 453 57.4
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.2e-141 507.3 447 56.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 5.9e-141 505.0 452 54.2
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 5.0e-140 501.9 453 55.4
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 8.5e-140 501.1 463 54.4
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 4.2e-139 498.8 444 53.6
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 5.5e-139 498.4 463 52.9
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 5.5e-139 498.4 463 53.1
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 3.6e-138 495.7 457 53.4
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 4.7e-138 495.4 439 53.8
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.0e-138 494.6 475 53.1
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.3e-136 489.2 456 52.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 4.4e-136 488.8 466 54.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 4.4e-136 488.8 460 53.3
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 5.7e-136 488.4 465 52.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 9.7e-136 487.6 448 52.9
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 6.3e-135 485.0 448 52.2
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.4e-134 483.8 457 53.6
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.3e-132 477.2 457 51.6
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.7e-132 476.9 462 52.8
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-132 476.9 457 51.6
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.8e-132 475.7 457 51.6
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.5e-132 474.6 457 51.2
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.1e-131 474.2 465 52.0
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.5e-131 473.8 457 51.2
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.5e-131 473.8 464 52.2
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 8.0e-130 468.0 445 51.9
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.5e-128 463.8 447 52.3
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.3e-127 460.7 439 51.9
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.8e-127 459.5 451 52.3
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 6.3e-127 458.4 467 51.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 1.2e-125 454.1 446 52.0
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.2e-125 454.1 457 50.3
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 7.7e-125 451.4 449 51.9
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.5e-123 447.2 459 49.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.5e-123 446.4 437 51.0
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.1e-122 443.4 446 50.9
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.6e-122 442.6 446 49.8
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 6.1e-122 441.8 443 51.7
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 5.2e-121 438.7 446 49.8
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.5e-120 437.2 448 48.2
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 9.1e-118 427.9 450 49.8
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.0e-116 424.5 451 49.2
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.3e-116 424.1 427 50.6
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 2.9e-116 422.9 446 49.8
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.9e-115 420.2 404 51.0
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.9e-115 420.2 434 48.8
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 6.1e-114 415.2 454 45.8
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.3e-111 407.5 445 46.5
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 4.9e-111 405.6 432 46.8
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.8e-110 403.7 485 45.2
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.8e-110 403.7 435 47.4
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.4e-110 403.3 438 47.9
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 7.0e-110 401.7 437 48.1
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.8e-106 389.8 319 60.5
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 4.7e-106 389.0 435 45.7
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 8.0e-106 388.3 433 46.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.4e-105 387.5 439 46.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.1e-105 386.3 431 46.2
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.2e-104 384.4 429 45.7
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.5e-104 384.0 434 45.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 3.5e-101 372.9 438 45.7
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 3.5e-101 372.9 438 45.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.1e-98 363.6 436 44.5
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 3.6e-98 362.8 439 43.1
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 6.8e-97 358.6 432 44.9
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.2e-95 353.6 430 44.2
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 7.1e-94 348.6 430 44.0
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 7.3e-91 338.6 305 53.8
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.9e-87 326.6 349 47.6
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 3.7e-87 326.2 432 42.4
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 2.4e-86 323.6 270 61.5
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.4e-81 307.8 305 54.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 9.0e-73 278.5 219 65.8
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.0e-68 265.0 482 33.0
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.5e-61 240.0 274 46.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 7.4e-59 232.3 326 42.6
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.4e-57 228.0 521 31.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.8e-57 227.6 367 37.6
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.8e-52 211.1 239 45.2
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.4e-38 164.9 471 26.3
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.2e-38 163.7 150 52.7
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 2.4e-33 147.5 549 23.0
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.7e-29 134.0 129 49.6
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.0e-28 132.1 194 35.6
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 3.3e-27 127.1 105 57.1
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.1e-25 120.6 104 51.9
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 4.1e-25 120.2 115 52.2
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.2e-24 118.6 120 45.8
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 3.5e-24 117.1 224 36.2
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 7.2e-22 109.4 118 50.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.7e-21 107.5 91 56.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.0e-20 103.6 160 35.0
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 6.7e-20 102.8 87 63.2
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.8e-18 97.4 85 61.2
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-14 85.5 65 56.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.2e-13 82.0 95 40.0
SalBow4G1020 Salvia bowleyana HOM05D006323 ORTHO05D007827 5.7e-11 73.2 45 73.3
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 2.2e-07 61.2 135 27.4


User provided reference genes

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