Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 6.6e-193 677.2 336 100.0
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 7.2e-147 524.2 335 75.5
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 9.4e-147 523.9 336 75.0
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 9.4e-123 444.1 346 63.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 2.7e-122 442.6 336 64.0
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.8e-121 439.9 346 63.0
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 4.5e-117 425.2 336 60.7
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.7e-116 423.3 336 61.3
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 3.2e-115 419.1 331 61.3
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.2e-114 417.2 335 63.0
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.5e-112 410.2 327 62.7
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 3.4e-112 409.1 328 61.0
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.4e-112 408.7 333 60.4
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 7.5e-112 407.9 332 61.4
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 4.8e-111 405.2 333 61.0
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.1e-110 404.1 341 60.4
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.9e-108 396.0 337 58.2
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.9e-108 396.0 338 59.2
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.9e-108 396.0 343 58.0
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 2.5e-107 392.9 343 57.4
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 4.2e-107 392.1 341 57.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.8e-106 389.4 344 59.0
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.8e-106 389.4 338 55.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 4.7e-106 388.7 343 58.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 6.1e-106 388.3 341 57.2
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 8.0e-106 387.9 343 56.3
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.0e-106 387.9 341 58.7
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.8e-105 386.7 338 59.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 3.0e-105 386.0 341 58.4
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 5.2e-105 385.2 342 55.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 8.9e-105 384.4 333 56.5
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 8.9e-105 384.4 347 57.1
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.4e-104 382.5 337 55.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.4e-104 382.5 343 58.0
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 3.4e-104 382.5 349 57.3
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 7.5e-104 381.3 338 58.0
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.3e-103 380.6 342 57.6
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.7e-103 379.0 372 51.9
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.9e-103 378.6 332 57.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 4.9e-103 378.6 333 56.5
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.1e-102 377.5 342 56.1
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.4e-102 376.3 339 57.5
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 4.1e-102 375.6 334 56.0
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.6e-101 373.6 332 58.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.5e-101 372.5 341 55.7
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 2.3e-100 369.8 337 56.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.9e-100 369.4 337 55.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.5e-99 367.1 337 55.8
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.3e-99 365.5 341 55.4
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 5.6e-99 365.2 335 56.7
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 9.5e-99 364.4 340 56.2
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.3e-97 359.8 340 55.6
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.2e-97 358.6 353 53.0
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.5e-96 357.1 339 55.5
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 4.4e-96 355.5 340 55.0
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.3e-95 354.0 337 56.7
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 2.9e-95 352.8 339 54.6
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.7e-95 352.4 337 56.4
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 3.7e-95 352.4 333 54.7
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 8.3e-95 351.3 342 53.5
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 8.3e-95 351.3 329 52.9
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 3.2e-94 349.4 346 50.6
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.6e-93 347.1 341 54.8
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.0e-92 344.4 338 53.6
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 3.0e-92 342.8 323 54.5
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.1e-91 340.9 337 55.5
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.6e-90 337.0 329 53.5
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.1e-90 336.7 330 52.7
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.1e-90 336.7 322 54.0
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 2.8e-90 336.3 345 49.3
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 4.7e-90 335.5 347 49.6
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 6.2e-90 335.1 329 53.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.3e-89 333.2 348 52.9
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 3.1e-89 332.8 332 53.9
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 5.2e-89 332.0 275 59.6
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 2.0e-88 330.1 340 52.4
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 3.4e-88 329.3 333 52.0
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.9e-87 326.2 423 44.7
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 3.7e-87 325.9 333 51.4
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 5.4e-86 322.0 275 60.0
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.2e-85 320.9 296 54.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.6e-85 320.5 267 60.3
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.0e-84 317.8 339 51.0
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.3e-84 317.4 275 58.2
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.9e-83 313.5 337 51.3
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 4.7e-82 308.9 342 47.7
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.1e-81 307.8 336 51.2
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.1e-78 297.7 212 67.9
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 6.2e-74 282.0 212 64.6
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.8e-73 280.4 334 46.1
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 4.0e-57 226.1 171 63.7
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 5.8e-56 222.2 235 51.9
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 7.6e-56 221.9 315 38.4
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 8.1e-50 201.8 292 43.2
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.7e-43 179.1 186 52.7
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 2.4e-41 173.7 176 50.0
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.5e-35 154.5 264 35.2
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 2.2e-34 150.6 257 36.2
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.4e-33 147.9 329 30.7
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 2.9e-31 140.2 192 43.2
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 8.8e-28 128.6 166 42.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 5.7e-27 125.9 128 50.0
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 7.4e-27 125.6 129 52.7
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.4e-25 121.3 169 39.1
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.8e-25 120.9 91 63.7
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 2.6e-24 117.1 125 51.2
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 2.7e-21 107.1 114 50.0
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 5.1e-20 102.8 210 36.2
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 6.5e-15 85.9 133 40.6
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 6.1e-13 79.3 141 34.8
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.8e-09 67.8 72 45.8
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 2.6e-08 63.9 66 47.0
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 1.1e-06 58.5 75 41.3
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.5e-06 58.2 52 53.8
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 2.5e-06 57.4 60 43.3


User provided reference genes

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