Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02769 Erythranthe guttata HOM05D004288 ORTHO05D004997 1.4e-33 145.6 70 100.0
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 5.7e-14 80.5 58 65.5
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.7e-13 79.0 63 57.1
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.7e-13 79.0 63 57.1
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 1.7e-13 79.0 64 62.5
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 4.8e-13 77.4 54 64.8
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 2.0e-11 72.0 57 57.9
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 2.0e-11 72.0 51 70.6
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.6e-11 71.6 51 70.6
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 3.5e-11 71.2 60 55.0
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 3.5e-11 71.2 51 64.7
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 4.5e-11 70.9 51 70.6
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 5.9e-11 70.5 46 67.4
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 5.9e-11 70.5 58 65.5
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 5.9e-11 70.5 59 64.4
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.0e-10 69.7 58 56.9
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.3e-10 69.3 61 55.7
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.3e-10 69.3 43 69.8
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 1.3e-10 69.3 48 64.6
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.3e-10 69.3 47 63.8
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.3e-10 69.3 47 63.8
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 1.7e-10 68.9 58 55.2
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.7e-10 68.9 47 61.7
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 2.2e-10 68.6 47 61.7
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 2.2e-10 68.6 51 66.7
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 2.2e-10 68.6 67 53.7
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 2.9e-10 68.2 42 71.4
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 2.9e-10 68.2 58 55.2
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 2.9e-10 68.2 57 57.9
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 3.8e-10 67.8 50 66.0
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 3.8e-10 67.8 58 60.3
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 3.8e-10 67.8 47 68.1
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 5.0e-10 67.4 44 65.9
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 5.0e-10 67.4 58 58.6
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 5.0e-10 67.4 45 71.1
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 6.5e-10 67.0 58 60.3
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 6.5e-10 67.0 40 75.0
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 6.5e-10 67.0 50 62.0
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 8.5e-10 66.6 47 63.8
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 1.1e-09 66.2 60 53.3
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.1e-09 66.2 44 68.2
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.1e-09 66.2 49 61.2
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 1.9e-09 65.5 46 63.0
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.9e-09 65.5 51 60.8
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.9e-09 65.5 56 50.0
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.5e-09 65.1 49 59.2
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 2.5e-09 65.1 49 59.2
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 3.2e-09 64.7 47 61.7
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 3.2e-09 64.7 56 58.9
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 4.2e-09 64.3 71 50.7
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 4.2e-09 64.3 40 75.0
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 5.5e-09 63.9 48 64.6
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 5.5e-09 63.9 43 62.8
Lsat_1_v5_gn_6_112441 Lactuca sativa HOM05D004288 ORTHO05D004997 5.5e-09 63.9 63 54.0
unitig_8.g4880 Utricularia gibba HOM05D004288 ORTHO05D004997 5.5e-09 63.9 61 52.5
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 7.2e-09 63.5 51 58.8
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 7.2e-09 63.5 49 57.1
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 7.2e-09 63.5 48 66.7
TPR.G3776 Trifolium pratense HOM05D004288 ORTHO05D004997 7.2e-09 63.5 52 57.7
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 9.4e-09 63.2 49 61.2
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 1.2e-08 62.8 57 52.6
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.2e-08 62.8 50 62.0
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.2e-08 62.8 40 67.5
Os03g0206201 Oryza sativa ssp. japonica HOM05D004288 ORTHO05D004997 1.2e-08 62.8 47 55.3
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.2e-08 62.8 51 51.0
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 1.6e-08 62.4 50 58.0
Lsat_1_v5_gn_4_130821 Lactuca sativa HOM05D004288 ORTHO05D004997 1.6e-08 62.4 63 50.8
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 1.6e-08 62.4 44 63.6
CANSAT54G1812 Cannabis sativa HOM05D004288 ORTHO05D004997 2.1e-08 62.0 44 56.8
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-08 62.0 50 60.0
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 2.1e-08 62.0 58 48.3
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 2.7e-08 61.6 46 60.9
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 2.7e-08 61.6 62 51.6
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 3.6e-08 61.2 45 66.7
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 3.6e-08 61.2 45 66.7
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 3.6e-08 61.2 45 66.7
HanXRQChr11g0341661 Helianthus annuus HOM05D004288 ORTHO05D004997 3.6e-08 61.2 60 50.0
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 3.6e-08 61.2 51 54.9
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 4.7e-08 60.8 55 52.7
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 4.7e-08 60.8 46 58.7
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.1e-08 60.5 50 60.0
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 6.1e-08 60.5 45 62.2
PGR031G3267 Punica granatum HOM05D004288 ORTHO05D004997 8.0e-08 60.1 45 64.4
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 1.0e-07 59.7 50 58.0
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 1.0e-07 59.7 59 50.8
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 1.4e-07 59.3 55 52.7
FvH4_2g33280 Fragaria vesca HOM05D004288 ORTHO05D004997 1.4e-07 59.3 48 56.2
FAN24G2538 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.4e-07 59.3 48 56.2
FAN27G1232 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.4e-07 59.3 48 56.2
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 1.8e-07 58.9 53 54.7
HanXRQChr09g0266571 Helianthus annuus HOM05D004288 ORTHO05D004997 1.8e-07 58.9 58 46.6
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 2.3e-07 58.5 49 53.1
FAN20G2816 Fragaria x ananassa HOM05D004288 ORTHO05D004997 3.0e-07 58.2 48 54.2
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 3.0e-07 58.2 39 64.1
MELO3C032376.2 Cucumis melo HOM05D004288 ORTHO05D004997 4.0e-07 57.8 65 50.8
MELO3C016806.2 Cucumis melo HOM05D004288 ORTHO05D004997 6.7e-07 57.0 41 63.4
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 6.7e-07 57.0 45 60.0
Sed0012219 Sechium edule HOM05D004288 ORTHO05D004997 6.7e-07 57.0 45 55.6
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 6.7e-07 57.0 48 56.2
HPP92_013399 Vanilla planifolia HOM05D059585 ORTHO05D004997 6.7e-07 57.0 52 51.9
DCAR_008852 Daucus carota HOM05D004288 ORTHO05D004997 8.8e-07 56.6 38 68.4
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 1.2e-06 56.2 55 49.1
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.5e-06 55.8 41 61.0
FAN15G0972 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.5e-06 55.8 48 54.2
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 1.5e-06 55.8 56 48.2
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 2.0e-06 55.5 52 59.6
PSO675G1665 Papaver somniferum HOM05D004288 ORTHO05D004997 2.6e-06 55.1 52 50.0
Zm00001eb007460 Zea mays HOM05D004288 ORTHO05D004997 2.6e-06 55.1 42 54.8
Aqoxy5G00895 Aquilegia oxysepala HOM05D003189 ORTHO05D003449 3.3e-06 54.7 54 50.0
AT5G01075 Arabidopsis thaliana HOM05D004288 ORTHO05D004997 4.4e-06 54.3 45 57.8
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 4.4e-06 54.3 44 54.5
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 4.4e-06 54.3 51 51.0
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 4.4e-06 54.3 72 47.2
CDE04G1843 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 5.7e-06 53.9 57 43.9
CDE06G1799 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 5.7e-06 53.9 44 54.5
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 5.7e-06 53.9 46 65.2
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 5.7e-06 53.9 47 51.1
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 7.5e-06 53.5 46 56.5
Psat6g015560 Pisum sativum HOM05D004288 ORTHO05D004997 9.7e-06 53.1 52 50.0
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 9.7e-06 53.1 50 56.0
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 9.7e-06 53.1 52 50.0


User provided reference genes

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