Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.4e-105 386.3 199 100.0
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.8e-90 335.5 231 79.7
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 1.6e-61 240.0 205 64.4
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.1e-61 239.6 202 67.3
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 1.1e-57 227.3 197 62.9
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 2.4e-57 226.1 200 63.0
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 5.3e-57 224.9 192 63.0
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 6.9e-57 224.6 204 59.8
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 1.2e-56 223.8 165 66.1
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 2.0e-56 223.0 187 63.1
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 2.6e-56 222.6 204 60.3
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.6e-56 222.6 192 61.5
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 4.5e-56 221.9 152 71.7
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 2.9e-55 219.2 152 72.4
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.8e-55 218.8 196 59.7
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.8e-55 218.8 196 59.7
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 8.5e-55 217.6 194 60.3
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.4e-54 216.9 206 60.2
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.4e-54 216.9 199 58.8
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 3.2e-54 215.7 159 67.9
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 4.2e-54 215.3 193 60.6
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 4.2e-54 215.3 198 59.1
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 4.2e-54 215.3 206 58.3
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 5.5e-54 214.9 205 58.0
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 7.2e-54 214.5 238 55.0
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.2e-54 214.5 198 59.1
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.2e-53 213.8 172 64.5
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.2e-53 213.8 176 64.8
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 2.1e-53 213.0 196 56.1
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 2.7e-53 212.6 210 58.1
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.7e-53 212.6 177 63.3
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.7e-53 212.6 202 58.4
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 6.1e-53 211.5 204 57.4
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 6.1e-53 211.5 206 60.2
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 6.1e-53 211.5 178 64.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.0e-52 210.7 207 59.4
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.0e-52 210.7 161 62.7
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.0e-52 210.7 193 57.5
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.4e-52 210.3 206 58.7
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 2.3e-52 209.5 190 60.0
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.3e-52 209.5 184 60.3
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 3.9e-52 208.8 204 56.4
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 5.2e-52 208.4 210 58.1
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.1e-51 207.2 182 62.1
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 1.1e-51 207.2 189 59.3
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.5e-51 206.8 201 60.2
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.0e-51 206.5 159 63.5
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 2.6e-51 206.1 174 59.2
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 2.6e-51 206.1 150 68.7
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 3.3e-51 205.7 174 58.6
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 5.7e-51 204.9 159 65.4
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 9.7e-51 204.1 159 66.7
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 1.3e-50 203.8 201 55.2
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 1.3e-50 203.8 163 66.9
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.7e-50 203.4 157 69.4
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 2.2e-50 203.0 177 64.4
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 3.7e-50 202.2 182 61.0
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 4.8e-50 201.8 202 55.9
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 6.3e-50 201.4 194 57.2
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 8.2e-50 201.1 190 57.9
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.1e-49 200.7 192 56.8
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.1e-49 200.7 164 62.2
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 1.1e-49 200.7 157 65.6
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 1.4e-49 200.3 204 56.9
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 1.8e-49 199.9 191 56.0
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 4.1e-49 198.7 194 57.2
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 5.3e-49 198.4 159 66.7
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 5.3e-49 198.4 180 57.8
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 9.1e-49 197.6 182 59.3
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 1.2e-48 197.2 194 56.2
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.2e-48 197.2 158 63.9
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.6e-48 196.8 199 54.3
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 2.6e-48 196.1 204 52.5
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 5.9e-48 194.9 193 53.4
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 5.9e-48 194.9 150 64.7
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 7.7e-48 194.5 176 59.1
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 7.7e-48 194.5 199 55.8
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 7.7e-48 194.5 204 53.4
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.3e-47 193.7 151 64.2
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 2.9e-47 192.6 186 56.5
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 6.5e-47 191.4 196 56.1
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 8.5e-47 191.0 175 59.4
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 1.1e-46 190.7 187 56.7
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 1.1e-46 190.7 158 62.0
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-46 190.7 178 56.2
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.9e-46 189.9 187 56.7
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.9e-46 189.9 169 59.8
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 2.5e-46 189.5 149 64.4
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 1.6e-45 186.8 195 55.4
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 6.1e-45 184.9 130 69.2
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 4.0e-44 182.2 197 54.8
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 4.4e-43 178.7 158 59.5
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 5.7e-43 178.3 151 60.3
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 2.2e-42 176.4 211 49.8
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 2.8e-42 176.0 180 55.6
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 8.2e-42 174.5 119 74.8
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 7.0e-41 171.4 179 50.8
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 2.7e-40 169.5 179 49.7
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 3.5e-40 169.1 127 64.6
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 4.5e-40 168.7 150 56.7
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.7e-39 166.8 191 49.7
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 3.8e-39 165.6 133 64.7
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 4.2e-38 162.2 128 64.1
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 9.4e-38 161.0 128 60.2
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 3.0e-36 156.0 279 38.7
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 2.0e-35 153.3 182 47.3
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 8.3e-34 147.9 105 69.5
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.4e-33 147.1 151 53.0
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 9.1e-33 144.4 103 70.9
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 3.5e-32 142.5 131 57.3
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 6.5e-31 138.3 99 70.7
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 5.5e-30 135.2 181 44.8
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.2e-27 127.5 177 41.2
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.2e-27 127.5 182 44.0
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 3.1e-25 119.4 98 59.2
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 9.2e-25 117.9 214 39.7
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 3.3e-22 109.4 148 39.9
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 9.5e-22 107.8 188 42.0
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 6.6e-07 58.5 91 38.5
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 5.6e-06 55.5 40 67.5


User provided reference genes

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