Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 0.0e+00 1753.4 903 100.0
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 3.7e-174 616.3 1001 43.5
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 1.1e-136 491.9 1004 38.7
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 1.1e-114 418.7 984 36.4
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 2.0e-71 275.0 976 31.6
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 8.4e-33 146.7 1084 24.4
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 1.0e-30 139.8 1096 24.0
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 1.0e-30 139.8 976 25.1
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 2.3e-30 138.7 957 25.2
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 1.1e-29 136.3 1037 24.0
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.1e-29 136.3 1130 23.4
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 1.2e-28 132.9 220 39.5
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 2.8e-28 131.7 99 61.6
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 3.6e-28 131.3 116 54.3
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 1.8e-27 129.0 1021 24.0
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 1.2e-26 126.3 96 61.5
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 2.0e-26 125.6 158 47.5
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 2.6e-26 125.2 1113 23.2
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 5.8e-26 124.0 74 77.0
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 1.3e-25 122.9 76 73.7
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 1.3e-25 122.9 73 74.0
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 1.7e-25 122.5 79 74.7
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 3.8e-25 121.3 80 72.5
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 6.4e-25 120.6 93 63.4
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 8.4e-25 120.2 69 79.7
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 8.4e-25 120.2 69 79.7
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 1.4e-24 119.4 194 38.7
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 1.4e-24 119.4 92 65.2
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 1.9e-24 119.0 87 67.8
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 1.9e-24 119.0 86 67.4
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 2.4e-24 118.6 80 68.8
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 4.2e-24 117.9 119 51.3
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 4.2e-24 117.9 70 78.6
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 4.2e-24 117.9 225 39.1
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 7.1e-24 117.1 98 57.1
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 9.3e-24 116.7 78 71.8
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 1.2e-23 116.3 70 75.7
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.6e-23 115.9 71 76.1
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 1.6e-23 115.9 70 75.7
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 1.6e-23 115.9 65 80.0
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 1.6e-23 115.9 65 80.0
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 2.1e-23 115.5 70 75.7
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 3.5e-23 114.8 92 62.0
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 3.5e-23 114.8 1056 24.8
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 4.6e-23 114.4 70 75.7
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 6.0e-23 114.0 75 72.0
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 1.3e-22 112.8 92 58.7
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 2.3e-22 112.1 142 44.4
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 2.3e-22 112.1 84 64.3
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 2.3e-22 112.1 127 48.8
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 3.0e-22 111.7 252 34.5
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 3.9e-22 111.3 237 35.9
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 5.1e-22 110.9 121 48.8
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 8.7e-22 110.2 959 23.1
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 8.7e-22 110.2 309 31.7
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 1.1e-21 109.8 245 35.1
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 1.1e-21 109.8 75 68.0
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 1.5e-21 109.4 174 40.2
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 1.5e-21 109.4 380 27.9
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 1.9e-21 109.0 65 76.9
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 2.5e-21 108.6 124 48.4
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 3.3e-21 108.2 311 31.8
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 1.6e-20 105.9 309 31.7
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 2.8e-20 105.1 87 57.5
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 2.8e-20 105.1 338 31.1
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 1.4e-19 102.8 335 29.9
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 1.8e-19 102.4 160 40.0
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 4.0e-19 101.3 304 31.6
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 4.0e-19 101.3 192 37.0
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 1.2e-18 99.8 85 56.5
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 2.6e-18 98.6 506 26.1
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 3.4e-18 98.2 244 31.6
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 4.4e-18 97.8 254 32.7
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 3.8e-17 94.7 207 34.8
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 6.4e-17 94.0 949 24.4
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 1.1e-16 93.2 61 70.5
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 1.9e-16 92.4 347 29.1
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 1.9e-16 92.4 61 70.5
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 4.2e-16 91.3 87 54.0
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 7.1e-16 90.5 57 71.9
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 9.3e-16 90.1 130 39.2
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 2.7e-15 88.6 53 75.5
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 6.0e-15 87.4 958 22.4
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 6.0e-15 87.4 95 47.4
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 3.9e-14 84.7 969 22.3
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 1.9e-13 82.4 195 32.3
Lj2A1039T65 Lonicera japonica HOM05D006507 ORTHO05D007296 2.5e-13 82.0 638 26.3
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 4.3e-13 81.3 68 51.5
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 1.3e-12 79.7 67 59.7
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 1.1e-11 76.6 78 51.3
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 1.8e-11 75.9 192 33.3
Peaxi162Scf00072g00226 Petunia axillaris HOM05D006507 ORTHO05D007296 3.1e-11 75.1 982 23.6
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.3e-09 69.7 1126 21.0
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.7e-09 69.3 47 70.2
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 2.9e-09 68.6 63 54.0
Hma1.2p1_0660F.1_g197490 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 1.4e-08 66.2 72 51.4
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 3.2e-08 65.1 197 28.4
CBR_g19214 Chara braunii HOM05D006507 ORTHO05D007296 3.9e-06 58.2 99 40.4


User provided reference genes

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