Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02632 Erythranthe guttata HOM05D006507 ORTHO05D007296 9.6e-99 363.6 200 100.0
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 1.4e-49 200.3 198 55.1
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 1.7e-47 193.4 196 56.6
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 1.8e-36 156.8 178 52.8
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 1.4e-33 147.1 181 48.6
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 2.3e-23 113.2 182 42.3
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 8.6e-23 111.3 182 42.9
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 1.1e-22 110.9 166 47.0
CAN.G1001.3 Capsicum annuum HOM05D006507 ORTHO05D007296 3.3e-22 109.4 201 38.8
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 3.3e-22 109.4 181 43.1
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 7.3e-22 108.2 131 48.1
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 7.3e-22 108.2 131 48.9
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 9.5e-22 107.8 188 38.8
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 1.6e-21 107.1 186 43.0
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 3.6e-21 105.9 168 43.5
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 3.6e-21 105.9 181 42.5
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 4.7e-21 105.5 168 43.5
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 6.2e-21 105.1 175 41.1
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 6.2e-21 105.1 159 45.9
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 8.1e-21 104.8 170 40.6
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 1.8e-20 103.6 157 44.6
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.8e-20 103.6 179 40.2
Lj2A1039T65 Lonicera japonica HOM05D006507 ORTHO05D007296 2.3e-20 103.2 97 55.7
Hma1.2p1_2156F.1_g315450 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 3.1e-20 102.8 97 57.7
Nn2g12985 Nelumbo nucifera HOM05D006507 ORTHO05D007296 3.1e-20 102.8 197 39.6
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 4.0e-20 102.4 90 62.2
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 6.8e-20 101.7 206 39.3
vmacro03160 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 6.8e-20 101.7 101 55.4
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 1.2e-19 100.9 128 46.9
Solyc06g075410.4 Solanum lycopersicum HOM05D006507 ORTHO05D007296 2.6e-19 99.8 179 38.0
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 3.4e-19 99.4 190 41.1
RcHm_v2.0_Chr5g0061351 Rosa chinensis HOM05D006507 ORTHO05D007296 3.4e-19 99.4 172 43.0
Sopen02g037950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-19 99.4 173 38.7
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 1.3e-18 97.4 180 42.8
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 2.9e-18 96.3 108 54.6
Cpa.g.sc139.58 Carica papaya HOM05D006507 ORTHO05D007296 3.7e-18 95.9 136 47.1
HanXRQChr06g0183291 Helianthus annuus HOM05D006507 ORTHO05D007296 4.9e-18 95.5 101 52.5
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 4.9e-18 95.5 98 52.0
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 8.3e-18 94.7 182 43.4
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 8.3e-18 94.7 180 39.4
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 1.1e-17 94.4 119 48.7
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.1e-17 94.4 155 47.1
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 1.1e-17 94.4 142 46.5
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 1.9e-17 93.6 173 41.0
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 1.9e-17 93.6 171 41.5
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 1.9e-17 93.6 153 44.4
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 1.9e-17 93.6 81 64.2
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 3.2e-17 92.8 109 47.7
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 3.2e-17 92.8 181 38.7
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 5.4e-17 92.0 141 43.3
FvH4_3g33790 Fragaria vesca HOM05D006507 ORTHO05D007296 1.6e-16 90.5 157 42.7
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 2.1e-16 90.1 125 47.2
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 2.1e-16 90.1 89 59.6
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 4.6e-16 89.0 173 39.9
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 6.0e-16 88.6 137 39.4
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 7.8e-16 88.2 98 54.1
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 2.3e-15 86.7 113 44.2
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 2.3e-15 86.7 113 44.2
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 3.0e-15 86.3 137 42.3
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 3.9e-15 85.9 184 37.0
Aa31LG1G12330 Aethionema arabicum HOM05D006507 ORTHO05D007296 5.1e-15 85.5 116 46.6
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 5.1e-15 85.5 118 49.2
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 6.6e-15 85.1 111 46.8
FAN21G2403 Fragaria x ananassa HOM05D006507 ORTHO05D007296 8.6e-15 84.7 103 54.4
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 8.6e-15 84.7 185 36.8
Lalb_Chr19g0137491 Lupinus albus HOM05D006507 ORTHO05D007296 1.9e-14 83.6 191 36.6
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 3.3e-14 82.8 138 39.1
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.2e-13 80.9 103 53.4
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 2.8e-13 79.7 79 53.2
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 4.7e-13 79.0 180 37.2
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 6.2e-13 78.6 65 61.5
Peaxi162Scf00072g00227 Petunia axillaris HOM05D006507 ORTHO05D007296 6.2e-13 78.6 133 40.6
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 8.1e-13 78.2 172 37.2
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 2.4e-12 76.6 117 47.0
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 6.8e-12 75.1 185 33.5
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 1.5e-11 73.9 185 33.5
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 1.5e-11 73.9 185 33.5
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 2.6e-11 73.2 168 38.1
MD03G1109700 Malus domestica HOM05D006507 ORTHO05D007296 4.4e-11 72.4 67 61.2
CANSAT54G0008 Cannabis sativa HOM05D006507 ORTHO05D007296 5.8e-11 72.0 188 35.1
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 7.6e-11 71.6 80 56.2
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 7.6e-11 71.6 167 36.5
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 4.9e-10 68.9 86 50.0
Psat7g223120 Pisum sativum HOM05D006507 ORTHO05D007296 4.9e-10 68.9 134 38.1
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 6.4e-10 68.6 86 50.0
CDE04G2211 Ceratophyllum demersum HOM05D034970 ORTHO05D007296 2.1e-08 63.5 99 41.4
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 2.7e-08 63.2 119 36.1
CDE12G0493 Ceratophyllum demersum HOM05D034970 ORTHO05D007296 3.5e-08 62.8 99 41.4
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 2.3e-07 60.1 116 41.4
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 6.6e-07 58.5 107 39.3
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 8.7e-07 58.2 175 29.7
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 8.7e-07 58.2 88 44.3
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 8.7e-07 58.2 98 41.8
Zm00001eb246740 Zea mays HOM05D006507 ORTHO05D007296 8.7e-07 58.2 43 65.1
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 1.1e-06 57.8 131 34.4
MSTRG.10296 Avicennia marina HOM05D003265 ORTHO05D003819 1.5e-06 57.4 97 44.3
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 2.5e-06 56.6 98 41.8
Os11g0103100 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 5.6e-06 55.5 170 27.1
vmacro20061 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 7.3e-06 55.1 98 38.8
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 9.6e-06 54.7 90 41.1


User provided reference genes

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