Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02617 Erythranthe guttata HOM05D016002 ORTHO05D016997 4.6e-79 297.7 142 100.0
SGA_v2.0_scaffold80G25744 Striga asiatica HOM05D016002 ORTHO05D016997 5.0e-33 144.8 126 53.2
SalBow3G1078 Salvia bowleyana HOM05D016002 ORTHO05D016997 3.2e-32 142.1 133 54.9
SGA_v2.0_scaffold172G39078 Striga asiatica HOM05D016002 ORTHO05D016997 7.2e-32 141.0 148 52.0
Oeu042236.1 Olea europaea HOM05D016002 ORTHO05D016997 2.2e-28 129.4 133 46.6
Peaxi162Scf00086g00327 Petunia axillaris HOM05D016002 ORTHO05D016997 1.8e-19 99.8 123 43.1
Nitab4.5_0004438g0020 Nicotiana tabacum HOM05D016002 ORTHO05D016997 6.1e-15 84.7 85 49.4
Nitab4.5_0000570g0030 Nicotiana tabacum HOM05D016002 ORTHO05D016997 1.8e-14 83.2 85 49.4
GSVIVG01037389001 Vitis vinifera HOM05D000519 ORTHO05D001210 2.5e-08 62.8 98 39.8
Oeu025948.1 Olea europaea HOM05D000519 ORTHO05D001210 4.3e-08 62.0 85 44.7
AUR62000233 Chenopodium quinoa HOM05D000519 ORTHO05D001210 5.6e-08 61.6 71 49.3
Duzib168G0822 Durio zibethinus HOM05D000519 ORTHO05D001210 5.6e-08 61.6 77 44.2
Actinidia16364 Actinidia chinensis HOM05D000519 ORTHO05D001210 1.6e-07 60.1 94 38.3
PGSC0003DMG400022691 Solanum tuberosum HOM05D000519 ORTHO05D001210 1.6e-07 60.1 97 40.2
AL3G24120 Arabidopsis lyrata HOM05D000519 ORTHO05D001210 2.1e-07 59.7 100 42.0
CSS0027877 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.1e-07 59.7 73 47.9
CSS0032644 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.1e-07 59.7 73 47.9
BcaB06g25535 Brassica carinata HOM05D000519 ORTHO05D001210 2.8e-07 59.3 102 38.2
A05p36980 Brassica napus HOM05D000519 ORTHO05D001210 2.8e-07 59.3 103 36.9
Nitab4.5_0000428g0040 Nicotiana tabacum HOM05D000519 ORTHO05D001210 2.8e-07 59.3 97 40.2
Solyc01g009020.4 Solanum lycopersicum HOM05D000519 ORTHO05D001210 2.8e-07 59.3 97 40.2
Sopen01g004510 Solanum pennellii HOM05D000519 ORTHO05D001210 2.8e-07 59.3 97 40.2
Thecc.09G251500 Theobroma cacao HOM05D000519 ORTHO05D001210 2.8e-07 59.3 85 43.5
vmacro04012 Vaccinium macrocarpon HOM05D000519 ORTHO05D001210 2.8e-07 59.3 98 38.8
Cfa010161 Carpinus fangiana HOM05D000519 ORTHO05D001210 3.6e-07 58.9 83 42.2
COL.COLO4_33263 Corchorus olitorius HOM05D000519 ORTHO05D001210 3.6e-07 58.9 91 40.7
Dinv15409 Davidia involucrata HOM05D000519 ORTHO05D001210 3.6e-07 58.9 91 41.8
C05p55420 Brassica napus HOM05D000519 ORTHO05D001210 4.7e-07 58.5 105 38.1
BolC5t34208H Brassica oleracea HOM05D000519 ORTHO05D001210 4.7e-07 58.5 105 38.1
CiPaw.13G146400 Carya illinoinensis HOM05D000519 ORTHO05D001210 4.7e-07 58.5 85 41.2
Hma1.2p1_1843F.1_g305060 Hydrangea macrophylla HOM05D000519 ORTHO05D001210 4.7e-07 58.5 98 39.8
Hma1.2p1_2592F.1_g325053 Hydrangea macrophylla HOM05D000519 ORTHO05D001210 4.7e-07 58.5 98 39.8
Nitab4.5_0002300g0010 Nicotiana tabacum HOM05D000519 ORTHO05D001210 4.7e-07 58.5 91 39.6
Solyc12g099655.1 Solanum lycopersicum HOM05D016002 ORTHO05D016997 4.7e-07 58.5 53 47.2
BcaC05g29262 Brassica carinata HOM05D000519 ORTHO05D001210 6.1e-07 58.2 104 38.5
CiPaw.13G146600 Carya illinoinensis HOM05D000519 ORTHO05D001210 6.1e-07 58.2 85 41.2
Duzib150G0614 Durio zibethinus HOM05D000519 ORTHO05D001210 6.1e-07 58.2 77 44.2
PGR119G1689 Punica granatum HOM05D000519 ORTHO05D001210 6.1e-07 58.2 91 38.5
CSS0046566 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 8.0e-07 57.8 98 38.8
CANSAT25G3001 Cannabis sativa HOM05D000519 ORTHO05D001210 8.0e-07 57.8 92 40.2
Rhsim13G0213200 Rhododendron simsii HOM05D000519 ORTHO05D001210 8.0e-07 57.8 98 37.8
Sc16g0010850 Simmondsia chinensis HOM05D000519 ORTHO05D001210 8.0e-07 57.8 92 41.3
C01p52750 Brassica napus HOM05D000519 ORTHO05D001210 1.0e-06 57.4 106 36.8
BolC1t05212H Brassica oleracea HOM05D000519 ORTHO05D001210 1.0e-06 57.4 106 36.8
CANSAT54G0848 Cannabis sativa HOM05D000519 ORTHO05D001210 1.0e-06 57.4 85 41.2
Glyma.15G227500 Glycine max HOM05D000519 ORTHO05D001210 1.4e-06 57.0 99 36.4
Manes.02G134700 Manihot esculenta HOM05D000519 ORTHO05D001210 1.4e-06 57.0 98 36.7
Phvul.011G196600 Phaseolus vulgaris HOM05D000519 ORTHO05D001210 1.4e-06 57.0 88 38.6
Lsat_1_v5_gn_1_53641 Lactuca sativa HOM05D000519 ORTHO05D001210 1.8e-06 56.6 80 40.0
Ah.06g194910 Amaranthus hybridus HOM05D000519 ORTHO05D001210 2.3e-06 56.2 71 45.1
Cpa.g.sc34.197 Carica papaya HOM05D000519 ORTHO05D001210 2.3e-06 56.2 85 41.2
Haze_23548 Corylus avellana HOM05D000519 ORTHO05D001210 2.3e-06 56.2 85 38.8
CsaV3_1G041920 Cucumis sativus L. HOM05D000519 ORTHO05D001210 2.3e-06 56.2 91 36.3
Thhalv10021442m.g Eutrema salsugineum HOM05D000519 ORTHO05D001210 2.3e-06 56.2 99 37.4
Gohir.D09G106100 Gossypium hirsutum HOM05D000519 ORTHO05D001210 2.3e-06 56.2 69 44.9
Gorai.006G123500 Gossypium raimondii HOM05D000519 ORTHO05D001210 2.3e-06 56.2 69 44.9
BraA05t22497Z Brassica rapa HOM05D000519 ORTHO05D001210 3.0e-06 55.8 99 36.4
Gohir.A09G109500 Gossypium hirsutum HOM05D000519 ORTHO05D001210 3.0e-06 55.8 63 47.6
HanXRQChr03g0091631 Helianthus annuus HOM05D000519 ORTHO05D001210 3.0e-06 55.8 85 42.4
VMungo1127G0633 Vigna mungo HOM05D000519 ORTHO05D001210 3.0e-06 55.8 103 35.9
Carub.0003s1182 Capsella rubella HOM05D000519 ORTHO05D001210 4.0e-06 55.5 100 39.0
Sed0006841 Sechium edule HOM05D000519 ORTHO05D001210 4.0e-06 55.5 91 38.5
TWI79G0790 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 4.0e-06 55.5 83 41.0
Zm00001eb369350 Zea mays HOM05D000519 ORTHO05D001210 4.0e-06 55.5 103 35.9
Duzib170G0541 Durio zibethinus HOM05D000519 ORTHO05D001210 5.2e-06 55.1 80 42.5
EL10Ac4g10062 Beta vulgaris HOM05D000519 ORTHO05D001210 6.8e-06 54.7 62 45.2
BcaC09g48245 Brassica carinata HOM05D000519 ORTHO05D001210 6.8e-06 54.7 100 36.0
CiPaw.13G146500 Carya illinoinensis HOM05D000519 ORTHO05D001210 6.8e-06 54.7 66 45.5
Glyma.13G189500 Glycine max HOM05D000519 ORTHO05D001210 6.8e-06 54.7 88 37.5
Glyma.18G103700 Glycine max HOM05D000519 ORTHO05D001210 6.8e-06 54.7 104 35.6
AT3G12490 Arabidopsis thaliana HOM05D000519 ORTHO05D001210 8.9e-06 54.3 99 37.4
arahy.Tifrunner.gnm1.ann1.UN6PZ5 Arachis hypogaea HOM05D000519 ORTHO05D001210 8.9e-06 54.3 91 38.5
BraA01t04133Z Brassica rapa HOM05D000519 ORTHO05D001210 8.9e-06 54.3 106 34.9
FAN06G3149 Fragaria x ananassa HOM05D000519 ORTHO05D001210 8.9e-06 54.3 99 36.4
Sp3g10620 Schrenkiella parvula HOM05D000519 ORTHO05D001210 8.9e-06 54.3 100 39.0


User provided reference genes

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