Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 8.8e-96 353.6 176 100.0
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 1.1e-53 213.8 157 66.9
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 2.1e-49 199.5 158 62.0
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 3.6e-49 198.7 158 63.3
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 4.4e-47 191.8 165 57.6
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.9e-46 189.1 159 59.1
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.2e-45 185.7 159 56.0
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 5.4e-45 184.9 129 69.8
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 2.7e-44 182.6 143 60.8
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 2.7e-44 182.6 143 60.8
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 7.8e-44 181.0 136 64.7
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.0e-43 180.6 149 59.7
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.3e-43 180.3 149 60.4
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.3e-43 180.3 145 62.1
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.7e-43 179.9 159 57.9
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 3.9e-43 178.7 164 54.3
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 5.0e-43 178.3 136 62.5
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 5.0e-43 178.3 142 60.6
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.6e-43 177.6 152 55.9
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.1e-42 177.2 155 56.1
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.5e-42 176.0 148 58.8
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.5e-42 176.0 143 59.4
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 4.3e-42 175.3 143 57.3
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 5.6e-42 174.9 143 58.0
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 7.3e-42 174.5 143 57.3
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 7.3e-42 174.5 151 57.0
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 7.3e-42 174.5 143 58.7
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 9.5e-42 174.1 166 53.0
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.6e-41 173.3 148 57.4
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.6e-41 173.3 152 54.6
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 8.1e-41 171.0 148 57.4
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 1.1e-40 170.6 149 57.0
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.4e-40 170.2 151 55.0
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.8e-40 169.9 143 55.2
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 3.1e-40 169.1 159 50.9
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 3.1e-40 169.1 153 55.6
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 4.0e-40 168.7 146 54.8
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 5.2e-40 168.3 141 56.0
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 5.2e-40 168.3 155 54.2
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 8.9e-40 167.5 161 53.4
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 2.0e-39 166.4 149 55.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.6e-39 166.0 157 50.3
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 2.6e-39 166.0 141 56.0
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 3.4e-39 165.6 159 54.1
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 4.4e-39 165.2 139 56.1
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 4.4e-39 165.2 147 54.4
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 9.9e-39 164.1 146 55.5
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 9.9e-39 164.1 141 56.7
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 1.3e-38 163.7 155 52.9
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.7e-38 163.3 143 55.2
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 2.2e-38 162.9 140 56.4
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.2e-38 162.9 145 54.5
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 3.7e-38 162.2 148 52.0
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 4.9e-38 161.8 163 49.7
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 4.9e-38 161.8 144 54.2
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 4.9e-38 161.8 144 54.2
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 4.9e-38 161.8 143 52.4
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 6.4e-38 161.4 145 53.1
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 6.4e-38 161.4 137 56.2
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 8.3e-38 161.0 149 50.3
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.1e-37 160.6 149 52.3
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.1e-37 160.6 155 50.3
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.4e-37 160.2 141 53.2
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.9e-37 159.8 159 50.3
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 2.4e-37 159.5 140 55.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.4e-37 159.5 145 53.1
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 2.4e-37 159.5 155 50.3
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 3.2e-37 159.1 147 52.4
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.2e-37 159.1 145 53.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 4.1e-37 158.7 145 53.8
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 4.1e-37 158.7 147 52.4
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.1e-37 157.9 140 53.6
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 9.2e-37 157.5 137 56.2
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 9.2e-37 157.5 155 51.0
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.6e-36 156.8 144 52.8
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.6e-36 156.8 148 51.4
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.6e-36 156.8 161 53.4
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 2.7e-36 156.0 138 53.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 3.5e-36 155.6 145 51.7
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 4.6e-36 155.2 145 51.7
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 4.6e-36 155.2 161 49.7
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 6.0e-36 154.8 145 51.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 6.0e-36 154.8 154 50.6
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 1.0e-35 154.1 154 48.1
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.0e-35 154.1 143 49.7
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.3e-35 153.7 145 51.0
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 1.3e-35 153.7 148 50.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 3.0e-35 152.5 129 56.6
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 3.9e-35 152.1 159 49.1
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 6.6e-35 151.4 116 61.2
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 6.6e-35 151.4 159 50.9
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 8.6e-35 151.0 148 50.7
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.1e-34 150.6 139 52.5
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.1e-34 150.6 146 48.6
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 1.1e-34 150.6 142 48.6
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.9e-34 149.8 142 50.7
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 5.6e-34 148.3 142 50.7
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 5.6e-34 148.3 141 51.8
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 7.3e-34 147.9 159 49.7
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 9.5e-34 147.5 140 48.6
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 9.5e-34 147.5 135 51.1
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.6e-33 146.7 153 50.3
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 2.0e-31 139.8 146 50.7
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 2.0e-31 139.8 171 47.4
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 4.1e-29 132.1 132 47.7
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 8.7e-27 124.4 142 46.5
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 1.1e-26 124.0 122 53.3
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 2.8e-25 119.4 133 40.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.1e-24 117.5 94 56.4
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 1.4e-24 117.1 94 55.3
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 5.2e-24 115.2 101 50.5
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 5.2e-24 115.2 142 40.1
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 6.9e-24 114.8 152 45.4
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 3.4e-23 112.5 138 42.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 8.4e-22 107.8 133 39.8
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.1e-21 107.5 132 42.4
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.3e-19 100.5 77 61.0
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 6.6e-19 98.2 110 49.1
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 2.4e-16 89.7 138 36.2
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 5.3e-16 88.6 113 39.8
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 2.0e-15 86.7 80 55.0
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 7.6e-15 84.7 139 35.3
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 1.7e-14 83.6 78 48.7
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 4.9e-14 82.0 147 34.0
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.8e-11 73.6 71 49.3
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 8.7e-11 71.2 72 48.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 8.7e-11 71.2 64 51.6
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 1.1e-10 70.9 76 47.4
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 6.9e-08 61.6 71 43.7
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.2e-06 56.6 50 52.0


User provided reference genes

Program Settings