Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 3.1e-87 325.1 165 100.0
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.6e-51 206.5 166 62.7
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.1e-47 193.7 164 64.6
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.2e-46 190.3 140 69.3
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 7.8e-46 187.6 119 76.5
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.9e-44 183.0 160 58.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 2.5e-44 182.6 166 59.6
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 2.5e-44 182.6 133 69.2
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.5e-44 182.6 131 69.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 3.3e-44 182.2 133 68.4
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.6e-44 181.4 143 62.9
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 5.6e-44 181.4 126 69.0
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 7.3e-44 181.0 162 61.1
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 9.5e-44 180.6 120 72.5
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 1.6e-43 179.9 121 73.6
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 8.1e-43 177.6 130 68.5
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.1e-42 177.2 166 57.8
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.4e-42 176.8 166 60.8
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.8e-42 176.4 130 67.7
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.8e-42 176.4 129 66.7
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 4.0e-42 175.3 120 69.2
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 6.8e-42 174.5 120 68.3
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 8.9e-42 174.1 156 55.8
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.5e-41 173.3 120 68.3
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.5e-41 173.3 118 72.0
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.5e-41 173.3 118 68.6
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.5e-41 173.3 124 68.5
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 3.4e-41 172.2 118 67.8
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.4e-41 172.2 118 67.8
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 5.8e-41 171.4 120 71.7
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 5.8e-41 171.4 124 66.1
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 7.6e-41 171.0 160 58.8
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 7.6e-41 171.0 162 58.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 7.6e-41 171.0 160 55.0
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 9.9e-41 170.6 126 64.3
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 9.9e-41 170.6 163 58.9
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.3e-40 170.2 118 66.9
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.2e-40 169.5 163 54.0
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 2.2e-40 169.5 126 71.4
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.9e-40 169.1 119 66.4
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 3.8e-40 168.7 160 56.2
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 3.8e-40 168.7 125 64.8
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 8.4e-40 167.5 120 73.3
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.4e-40 167.5 104 75.0
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 8.4e-40 167.5 125 68.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.4e-39 166.8 126 63.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.9e-39 166.4 161 55.3
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.9e-39 166.4 161 55.3
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.9e-39 166.4 161 55.3
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.9e-39 166.4 119 65.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.4e-39 166.0 161 55.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.4e-39 166.0 161 55.3
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 3.2e-39 165.6 115 69.6
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.1e-39 165.2 125 62.4
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 5.4e-39 164.9 169 54.4
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.2e-38 163.7 166 53.6
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.2e-38 163.7 125 65.6
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 4.6e-38 161.8 119 63.9
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 4.6e-38 161.8 115 69.6
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.6e-38 161.8 113 71.7
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 6.0e-38 161.4 135 61.5
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 6.0e-38 161.4 127 66.1
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.0e-37 160.6 127 66.1
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 2.3e-37 159.5 119 63.0
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 5.1e-37 158.3 120 65.0
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 8.6e-37 157.5 163 55.8
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.5e-36 156.8 122 64.8
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.5e-36 156.8 126 59.5
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 4.3e-36 155.2 120 63.3
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.6e-35 153.3 159 54.1
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.8e-35 152.5 122 63.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.1e-34 150.6 114 62.3
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 3.1e-34 149.1 171 47.4
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 4.0e-34 148.7 124 61.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 9.9e-33 144.1 132 53.8
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.7e-32 143.3 162 49.4
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 2.2e-32 142.9 161 52.8
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 2.4e-31 139.4 150 50.7
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.9e-29 132.1 116 60.3
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 3.9e-29 132.1 95 64.2
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 5.1e-29 131.7 100 66.0
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 4.3e-28 128.6 101 64.4
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 5.6e-28 128.3 166 46.4
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 3.6e-27 125.6 124 54.8
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 4.8e-27 125.2 104 62.5
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.1e-26 124.0 119 56.3
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.8e-26 123.2 122 56.6
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 3.1e-26 122.5 95 62.1
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 9.9e-25 117.5 86 67.4
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.3e-24 117.1 97 63.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 6.4e-24 114.8 129 48.1
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.1e-23 114.0 125 52.0
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.4e-23 113.6 119 47.9
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 4.2e-23 112.1 120 47.5
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 5.4e-23 111.7 71 64.8
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 7.4e-20 101.3 108 47.2
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 4.8e-19 98.6 180 37.8
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 8.4e-16 87.8 123 42.3
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.4e-16 87.8 120 42.5
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.4e-15 87.0 120 42.5
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.9e-15 86.7 122 42.6
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.2e-14 84.0 108 42.6
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 5.6e-12 75.1 115 42.6
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 9.0e-10 67.8 64 54.7
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 4.5e-09 65.5 119 36.1


User provided reference genes

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