Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02515 Erythranthe guttata HOM05D003745 ORTHO05D004215 5.4e-44 180.6 93 100.0
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.1e-12 76.6 97 50.5
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.1e-12 76.6 97 50.5
MSTRG.21061 Avicennia marina HOM05D003745 ORTHO05D004215 2.7e-11 72.0 91 48.4
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 6.6e-10 67.4 94 46.8
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 6.6e-10 67.4 93 45.2
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.5e-09 66.2 93 44.1
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.9e-09 65.9 94 45.7
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 1.9e-09 65.9 92 39.1
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 3.3e-09 65.1 94 46.8
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 3.3e-09 65.1 93 44.1
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.6e-08 62.8 94 46.8
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 2.1e-08 62.4 91 41.8
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 3.6e-08 61.6 87 44.8
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 3.6e-08 61.6 95 44.2
MSTRG.17729 Avicennia marina HOM05D003745 ORTHO05D004215 3.6e-08 61.6 106 47.2
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 3.6e-08 61.6 93 38.7
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 3.6e-08 61.6 94 46.8
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 4.8e-08 61.2 93 43.0
TPR.G32386 Trifolium pratense HOM05D003745 ORTHO05D004215 1.1e-07 60.1 86 44.2
Oeu050182.1 Olea europaea HOM05D003745 ORTHO05D004215 1.4e-07 59.7 95 42.1
Rhsim13G0105100 Rhododendron simsii HOM05D003745 ORTHO05D004215 1.8e-07 59.3 95 43.2
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 1.8e-07 59.3 91 40.7
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 2.4e-07 58.9 95 36.8
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 3.1e-07 58.5 94 41.5
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.3e-07 57.8 87 42.5
Lalb_Chr22g0350641 Lupinus albus HOM05D003745 ORTHO05D004215 5.3e-07 57.8 89 38.2
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 6.9e-07 57.4 92 35.9
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 9.0e-07 57.0 94 44.7
Oeu001652.1 Olea europaea HOM05D003745 ORTHO05D004215 9.0e-07 57.0 95 44.2
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 9.0e-07 57.0 97 37.1
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 1.2e-06 56.6 95 42.1
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 1.2e-06 56.6 90 41.1
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 2.0e-06 55.8 84 40.5
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 2.0e-06 55.8 87 39.1
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 2.0e-06 55.8 97 37.1
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 2.0e-06 55.8 89 37.1
Glyma.13G319200 Glycine max HOM05D003745 ORTHO05D004215 4.4e-06 54.7 86 38.4
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 5.8e-06 54.3 93 37.6
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 7.6e-06 53.9 95 40.0
Ciclev10013197m.g Citrus clementina HOM05D003745 ORTHO05D004215 9.9e-06 53.5 96 41.7
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 9.9e-06 53.5 91 37.4


User provided reference genes

Program Settings