Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 6.9e-110 400.6 195 100.0
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 3.6e-34 149.1 276 37.0
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 1.1e-33 147.5 195 45.6
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 3.1e-33 146.0 186 44.6
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 7.6e-32 141.4 271 36.2
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 2.3e-28 129.8 188 41.0
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 3.0e-28 129.4 270 34.4
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 3.9e-28 129.0 198 38.4
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 3.6e-26 122.5 253 34.4
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 4.8e-26 122.1 240 35.0
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 1.1e-25 120.9 263 33.1
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 1.1e-25 120.9 273 31.9
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 1.4e-25 120.6 269 32.7
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.8e-25 120.2 266 32.7
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 4.0e-25 119.0 278 32.7
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 4.0e-25 119.0 271 36.2
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 5.3e-25 118.6 279 35.5
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 1.5e-24 117.1 278 33.8
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 1.5e-24 117.1 273 33.0
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 2.0e-24 116.7 251 33.9
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 2.6e-24 116.3 279 33.7
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 3.4e-24 115.9 271 32.1
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 5.8e-24 115.2 269 30.1
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 1.7e-23 113.6 247 32.8
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 2.9e-23 112.8 251 31.5
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 3.8e-23 112.5 271 30.6
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 4.9e-23 112.1 244 34.0
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 6.4e-23 111.7 270 29.6
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.9e-22 110.2 258 31.4
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 7.1e-22 108.2 273 31.9
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 7.1e-22 108.2 252 33.3
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.2e-21 107.5 163 36.2
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.2e-21 107.5 163 36.2
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.2e-21 107.5 163 36.2
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 2.7e-21 106.3 186 34.4
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 2.7e-21 106.3 186 34.4
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 3.0e-20 102.8 219 33.8
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 3.0e-20 102.8 70 58.6
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 3.9e-20 102.4 80 55.0
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 1.9e-19 100.1 73 58.9
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 3.3e-19 99.4 232 33.6
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 4.3e-19 99.0 61 65.6
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.6e-18 97.1 77 58.4
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 8.1e-18 94.7 62 64.5
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 1.8e-17 93.6 49 73.5
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 6.9e-17 91.7 172 31.4
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 2.6e-16 89.7 62 56.5
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 3.4e-16 89.4 103 48.5
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 9.9e-16 87.8 179 28.5
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 2.9e-15 86.3 68 51.5
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 3.8e-15 85.9 99 43.4
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 6.4e-15 85.1 55 63.6
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 1.9e-14 83.6 179 27.9
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 2.4e-14 83.2 183 29.0
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 3.2e-14 82.8 56 57.1
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 3.2e-14 82.8 179 27.4
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 4.2e-14 82.4 192 27.1
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 4.2e-14 82.4 80 46.2
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 9.3e-14 81.3 64 50.0
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 2.1e-13 80.1 265 26.8
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 3.5e-13 79.3 77 50.6
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 4.6e-13 79.0 264 26.9
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 1.0e-12 77.8 63 52.4
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 2.3e-12 76.6 250 28.0
CSS0019289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-12 76.3 96 45.8
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 5.1e-12 75.5 71 52.1
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 6.7e-12 75.1 266 27.1
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 1.9e-11 73.6 111 44.1
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 3.3e-11 72.8 48 52.1
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 1.6e-10 70.5 98 37.8
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 6.2e-10 68.6 77 45.5
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.4e-09 67.4 48 62.5
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 2.4e-09 66.6 85 37.6
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 1.4e-06 57.4 37 56.8
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 2.5e-06 56.6 80 37.5
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 9.3e-06 54.7 49 46.9


User provided reference genes

Program Settings