Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02472 Erythranthe guttata HOM05D003565 ORTHO05D003943 2.1e-77 292.4 153 100.0
SGA_v2.0_scaffold177G39437 Striga asiatica HOM05D003565 ORTHO05D003943 4.7e-37 158.3 155 59.4
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 1.6e-29 133.3 151 53.0
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 4.4e-27 125.2 151 49.7
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 2.2e-18 96.3 156 39.7
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 1.1e-17 94.0 156 39.1
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 1.4e-17 93.6 166 36.7
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 9.2e-17 90.9 162 40.7
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.6e-16 90.1 155 38.7
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.6e-16 90.1 158 39.2
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 6.0e-16 88.2 156 39.1
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 6.0e-16 88.2 161 39.1
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 7.8e-16 87.8 156 39.1
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.3e-15 87.0 154 40.9
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 1.7e-15 86.7 146 39.7
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 1.7e-15 86.7 158 39.9
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.7e-15 86.7 158 35.4
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 5.1e-15 85.1 153 39.2
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 6.6e-15 84.7 165 36.4
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 8.6e-15 84.3 163 36.2
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 1.1e-14 84.0 157 38.2
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 2.5e-14 82.8 156 39.7
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 2.5e-14 82.8 143 40.6
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 3.3e-14 82.4 158 38.0
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 5.6e-14 81.6 158 36.7
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 7.3e-14 81.3 158 38.6
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.2e-13 80.5 153 38.6
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.1e-13 79.7 157 38.9
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 2.1e-13 79.7 161 39.8
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 2.8e-13 79.3 130 41.5
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 2.8e-13 79.3 152 38.2
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 3.6e-13 79.0 143 42.0
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 3.6e-13 79.0 162 35.2
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 8.1e-13 77.8 157 38.2
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.8e-12 76.6 132 40.2
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 1.8e-12 76.6 156 36.5
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 1.8e-12 76.6 148 37.2
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.8e-12 76.6 144 38.9
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 1.8e-12 76.6 157 36.3
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 3.1e-12 75.9 157 33.1
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.1e-12 75.9 151 35.1
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 3.1e-12 75.9 156 38.5
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 3.1e-12 75.9 156 36.5
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 3.1e-12 75.9 156 36.5
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 3.1e-12 75.9 147 36.7
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.0e-12 75.5 156 37.2
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 4.0e-12 75.5 168 35.1
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 4.0e-12 75.5 158 38.0
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 5.2e-12 75.1 121 37.2
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.2e-12 75.1 137 38.0
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.2e-12 75.1 149 36.9
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.2e-12 75.1 149 36.9
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 5.2e-12 75.1 142 39.4
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 5.2e-12 75.1 160 33.8
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 5.2e-12 75.1 160 33.8
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 5.2e-12 75.1 156 38.5
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 6.8e-12 74.7 127 43.3
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 8.9e-12 74.3 138 39.1
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 1.2e-11 73.9 145 35.9
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 1.2e-11 73.9 143 35.0
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 2.0e-11 73.2 159 37.1
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.0e-11 73.2 159 37.1
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 2.0e-11 73.2 156 37.2
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.6e-11 72.8 157 38.2
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.6e-11 72.8 159 37.1
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 2.6e-11 72.8 134 41.8
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 4.4e-11 72.0 158 36.7
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 5.8e-11 71.6 150 33.3
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.8e-11 71.6 134 43.3
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 9.9e-11 70.9 158 35.4
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 9.9e-11 70.9 143 32.9
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 1.3e-10 70.5 157 35.0
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.3e-10 70.5 159 39.0
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 1.7e-10 70.1 143 36.4
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 2.2e-10 69.7 130 38.5
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.9e-10 69.3 147 33.3
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 2.9e-10 69.3 135 36.3
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 3.8e-10 68.9 143 38.5
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.8e-10 68.9 158 38.0
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 4.9e-10 68.6 158 32.9
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 6.4e-10 68.2 157 33.8
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 8.4e-10 67.8 149 32.2
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.1e-09 67.4 149 32.2
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 1.9e-09 66.6 152 34.9
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 3.2e-09 65.9 130 36.2
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 4.1e-09 65.5 128 37.5
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 5.4e-09 65.1 138 37.0
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.1e-09 64.7 164 34.1
DCAR_027061 Daucus carota HOM05D003565 ORTHO05D003943 1.2e-08 63.9 138 37.7
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 1.2e-08 63.9 110 35.5
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 1.6e-08 63.5 136 33.1
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 2.7e-08 62.8 128 34.4
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 2.7e-08 62.8 128 35.9
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 2.7e-08 62.8 140 34.3
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 2.7e-08 62.8 102 36.3
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 3.5e-08 62.4 132 35.6
QL06p009817 Quercus lobata HOM05D003565 ORTHO05D003943 3.5e-08 62.4 159 31.4
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 4.6e-08 62.0 124 35.5
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 4.6e-08 62.0 152 31.6
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 4.6e-08 62.0 140 30.7
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 7.8e-08 61.2 156 32.7
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 7.8e-08 61.2 131 32.8
Os07g0674500 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 1.0e-07 60.8 149 31.5
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 1.3e-07 60.5 159 34.6
BcaB04g20866 Brassica carinata HOM05D003565 ORTHO05D003943 2.3e-07 59.7 130 36.9
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.3e-07 59.7 166 32.5
Os07g0674400 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 2.3e-07 59.7 153 34.0
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 3.9e-07 58.9 141 32.6
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 6.6e-07 58.2 154 32.5
RcHm_v2.0_Chr4g0422901 Rosa chinensis HOM05D003565 ORTHO05D003943 8.6e-07 57.8 144 35.4
QL06p009891 Quercus lobata HOM05D003565 ORTHO05D003943 1.5e-06 57.0 139 29.5
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 2.5e-06 56.2 149 36.2
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.5e-06 56.2 162 31.5
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 4.3e-06 55.5 141 28.4
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 9.6e-06 54.3 132 35.6


User provided reference genes

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