Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 1.8e-66 255.8 128 100.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 4.5e-41 171.4 133 69.9
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 4.5e-33 144.8 104 70.2
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 2.2e-32 142.5 130 56.2
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 3.8e-32 141.7 134 61.9
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 3.8e-32 141.7 99 70.7
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.5e-32 140.6 132 59.8
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 8.5e-32 140.6 127 60.6
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.1e-31 140.2 98 68.4
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 1.4e-31 139.8 100 71.0
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.4e-31 139.8 132 62.1
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.4e-31 139.8 97 69.1
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.5e-31 139.0 132 60.6
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 3.2e-31 138.7 134 56.7
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 4.2e-31 138.3 133 54.9
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 5.5e-31 137.9 130 59.2
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 5.5e-31 137.9 132 58.3
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 5.5e-31 137.9 102 68.6
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 7.2e-31 137.5 109 67.9
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 9.4e-31 137.1 101 66.3
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 9.4e-31 137.1 101 66.3
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 1.2e-30 136.7 132 58.3
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 1.6e-30 136.3 92 76.1
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 2.1e-30 136.0 95 71.6
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 2.1e-30 136.0 95 71.6
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.7e-30 135.6 107 66.4
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 3.6e-30 135.2 101 66.3
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 3.6e-30 135.2 94 70.2
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 4.7e-30 134.8 92 72.8
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 4.7e-30 134.8 98 65.3
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 6.1e-30 134.4 127 62.2
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 7.9e-30 134.0 131 59.5
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 7.9e-30 134.0 136 58.1
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 7.9e-30 134.0 97 72.2
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.4e-29 133.3 101 65.3
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 1.4e-29 133.3 128 59.4
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.8e-29 132.9 95 67.4
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.8e-29 132.9 72 84.7
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.3e-29 132.5 95 70.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 2.3e-29 132.5 72 86.1
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 3.0e-29 132.1 77 80.5
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 3.0e-29 132.1 95 67.4
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 3.9e-29 131.7 131 53.4
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 3.9e-29 131.7 97 70.1
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 3.9e-29 131.7 128 58.6
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 5.1e-29 131.3 128 57.0
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 5.1e-29 131.3 75 80.0
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 5.1e-29 131.3 94 66.0
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 6.7e-29 131.0 95 67.4
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 6.7e-29 131.0 138 53.6
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 8.8e-29 130.6 75 81.3
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 8.8e-29 130.6 96 65.6
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.1e-28 130.2 104 60.6
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.1e-28 130.2 104 60.6
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.5e-28 129.8 97 61.9
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 1.5e-28 129.8 74 78.4
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 1.5e-28 129.8 74 78.4
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 1.5e-28 129.8 74 78.4
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 1.5e-28 129.8 84 75.0
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.0e-28 129.4 75 77.3
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.0e-28 129.4 75 77.3
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 2.0e-28 129.4 128 57.0
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 2.0e-28 129.4 95 67.4
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 2.6e-28 129.0 95 65.3
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 3.3e-28 128.6 105 62.9
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 3.3e-28 128.6 97 62.9
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 4.4e-28 128.3 104 60.6
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 4.4e-28 128.3 93 67.7
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 5.7e-28 127.9 104 60.6
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 5.7e-28 127.9 74 78.4
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 5.7e-28 127.9 81 75.3
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 7.4e-28 127.5 75 76.0
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 7.4e-28 127.5 75 76.0
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 7.4e-28 127.5 104 60.6
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 9.7e-28 127.1 74 75.7
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 1.7e-27 126.3 75 74.7
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 1.7e-27 126.3 132 53.0
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 2.8e-27 125.6 70 80.0
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 3.7e-27 125.2 124 54.0
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 3.7e-27 125.2 91 68.1
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 3.7e-27 125.2 127 55.1
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 4.8e-27 124.8 132 53.0
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.1e-26 123.6 160 46.9
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 1.8e-26 122.9 94 63.8
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.8e-26 122.9 132 55.3
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 2.4e-26 122.5 89 67.4
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 5.3e-26 121.3 93 63.4
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 2.0e-25 119.4 118 55.1
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 5.9e-25 117.9 97 61.9
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 5.9e-25 117.9 70 72.9
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.3e-24 116.7 127 52.8
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 1.7e-24 116.3 124 53.2
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 2.2e-24 115.9 133 51.1
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 1.5e-23 113.2 87 60.9
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 5.5e-23 111.3 79 62.0
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 2.3e-21 105.9 116 51.7
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 4.0e-21 105.1 94 51.1
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.3e-20 102.1 70 60.0
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 3.7e-19 98.6 70 65.7
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 4.8e-19 98.2 94 54.3
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 6.3e-19 97.8 56 76.8
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 1.1e-18 97.1 101 51.5
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 1.8e-18 96.3 64 64.1
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 1.2e-17 93.6 96 54.2
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.0e-16 90.5 69 53.6
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 8.8e-13 77.4 64 62.5
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.3e-11 73.6 63 61.9
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 2.7e-09 65.9 39 71.8
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.0e-08 63.9 37 78.4
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.5e-07 59.3 57 52.6
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 3.2e-07 58.9 59 52.5
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 5.5e-07 58.2 35 74.3
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 7.2e-07 57.8 58 51.7


User provided reference genes

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