Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.1e-104 383.6 234 100.0
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 7.4e-50 201.4 177 63.8
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 1.2e-47 194.1 177 61.0
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 6.5e-46 188.3 180 61.1
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 1.1e-45 187.6 176 58.5
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 1.1e-45 187.6 176 58.5
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 2.2e-41 173.3 163 55.2
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 3.4e-39 166.0 112 70.5
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 3.4e-39 166.0 175 54.3
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 1.0e-38 164.5 124 66.1
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 6.5e-38 161.8 169 50.9
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 1.4e-37 160.6 113 66.4
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.9e-37 160.2 115 65.2
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 4.2e-37 159.1 115 64.3
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 4.2e-37 159.1 117 68.4
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 5.5e-37 158.7 177 50.8
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 9.4e-37 157.9 189 48.1
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 2.1e-36 156.8 114 64.0
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 6.1e-36 155.2 113 64.6
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 7.9e-36 154.8 113 64.6
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 7.9e-36 154.8 113 67.3
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 1.0e-35 154.5 100 70.0
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 1.8e-35 153.7 174 48.9
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 2.3e-35 153.3 114 64.0
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 2.3e-35 153.3 179 50.3
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 2.3e-35 153.3 104 69.2
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 2.3e-35 153.3 181 46.4
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 6.7e-35 151.8 117 60.7
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 6.7e-35 151.8 184 50.5
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 8.8e-35 151.4 113 63.7
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 1.1e-34 151.0 169 48.5
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 1.1e-34 151.0 104 68.3
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 1.1e-34 151.0 189 46.0
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 1.5e-34 150.6 184 46.2
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 2.0e-34 150.2 147 51.0
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 2.0e-34 150.2 169 49.1
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 2.6e-34 149.8 113 62.8
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 2.6e-34 149.8 118 61.0
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 3.3e-34 149.4 103 68.9
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 4.4e-34 149.1 118 61.0
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 4.4e-34 149.1 118 61.0
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 4.4e-34 149.1 118 61.0
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 4.4e-34 149.1 137 55.5
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.4e-34 149.1 100 69.0
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 5.7e-34 148.7 193 44.6
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 9.7e-34 147.9 113 64.6
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 9.7e-34 147.9 157 50.3
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 1.3e-33 147.5 114 63.2
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 1.3e-33 147.5 140 54.3
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 1.7e-33 147.1 104 66.3
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 1.7e-33 147.1 128 58.6
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 2.2e-33 146.7 103 68.0
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 3.7e-33 146.0 172 49.4
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 4.8e-33 145.6 164 48.8
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 6.3e-33 145.2 120 60.0
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 1.4e-32 144.1 196 43.9
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 1.4e-32 144.1 177 49.2
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 1.4e-32 144.1 113 60.2
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 1.4e-32 144.1 113 60.2
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 2.4e-32 143.3 146 50.0
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 3.1e-32 142.9 113 59.3
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 4.1e-32 142.5 111 63.1
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 4.1e-32 142.5 174 48.9
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 4.1e-32 142.5 156 51.3
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 5.3e-32 142.1 128 55.5
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 7.0e-32 141.7 176 48.3
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 9.1e-32 141.4 111 59.5
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 9.1e-32 141.4 100 67.0
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 1.2e-31 141.0 113 60.2
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 2.0e-31 140.2 114 56.1
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 2.6e-31 139.8 114 57.0
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 2.6e-31 139.8 100 63.0
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 4.5e-31 139.0 178 47.2
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 4.5e-31 139.0 153 49.0
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 7.7e-31 138.3 100 63.0
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 7.7e-31 138.3 157 45.9
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 1.0e-30 137.9 194 42.3
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 3.8e-30 136.0 120 58.3
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 5.0e-30 135.6 100 64.0
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 6.5e-30 135.2 100 62.0
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 6.5e-30 135.2 100 62.0
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 6.5e-30 135.2 166 45.8
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 1.1e-29 134.4 100 62.0
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 1.1e-29 134.4 100 62.0
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 1.1e-29 134.4 100 62.0
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 4.2e-29 132.5 148 55.4
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 5.5e-29 132.1 100 61.0
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 5.5e-29 132.1 107 54.2
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 9.4e-29 131.3 189 46.0
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 2.7e-28 129.8 96 64.6
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 2.7e-28 129.8 102 57.8
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 2.7e-28 129.8 99 58.6
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 8.0e-28 128.3 93 67.7
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 1.2e-26 124.4 102 52.0
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 7.5e-26 121.7 175 45.7
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 6.3e-25 118.6 102 50.0
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 1.6e-23 114.0 139 46.8
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 2.7e-20 103.2 176 40.9
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 6.1e-20 102.1 174 40.8
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 6.8e-19 98.6 107 45.8
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 1.2e-18 97.8 97 48.5
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 3.7e-17 92.8 73 63.0
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 1.1e-16 91.3 69 65.2
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 2.4e-16 90.1 115 39.1
MCO16G316 Micromonas commoda HOM05D007263 ORTHO05D009187 5.4e-16 89.0 125 36.8
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 2.0e-15 87.0 114 44.7
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 4.0e-11 72.8 104 41.3
Cre12.g534450 Chlamydomonas reinhardtii HOM05D007263 ORTHO05D009187 1.2e-10 71.2 123 37.4
PRCOL_00003243 Prasinoderma coloniale HOM05D007263 ORTHO05D009187 2.2e-09 67.0 100 37.0
Sabra04G0132300 Salix brachista HOM05D000052 ORTHO05D001127 4.5e-07 59.3 56 53.6


User provided reference genes

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