Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 8.3e-213 743.4 373 100.0
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.7e-157 559.7 389 75.6
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 7.2e-156 554.3 382 74.6
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.4e-153 545.0 389 72.5
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.8e-152 542.3 390 72.3
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 4.5e-150 535.0 414 70.0
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.3e-149 533.5 380 72.1
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.4e-148 530.0 396 68.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 7.2e-148 527.7 388 69.6
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.1e-147 526.2 384 71.4
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.0e-146 523.9 357 73.7
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.4e-146 523.5 393 68.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.2e-146 521.5 387 71.3
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.1e-145 520.4 311 81.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.0e-145 519.6 371 72.5
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.6e-145 519.2 357 73.1
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 3.3e-145 518.8 316 79.4
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 3.3e-145 518.8 378 69.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 7.4e-145 517.7 386 69.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 9.7e-145 517.3 357 73.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.3e-144 516.9 362 73.5
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.7e-144 516.5 396 68.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 6.3e-144 514.6 311 79.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.1e-143 513.8 383 69.5
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.1e-143 513.8 365 70.1
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.1e-143 513.8 391 68.5
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.1e-143 513.8 375 70.7
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.4e-143 512.7 305 81.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 3.1e-143 512.3 385 68.3
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 5.3e-143 511.5 398 67.8
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 7.0e-143 511.1 357 71.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 7.0e-143 511.1 390 69.2
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.1e-143 510.8 385 69.4
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 9.1e-143 510.8 386 68.7
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.6e-142 510.0 381 68.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.0e-142 509.6 381 68.2
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.0e-142 509.6 383 69.5
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.6e-142 509.2 396 67.7
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.5e-142 508.8 377 69.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.3e-141 506.9 381 68.0
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.3e-141 506.9 380 68.7
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.7e-141 506.5 360 69.7
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.2e-141 506.1 372 70.4
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.8e-141 505.4 310 79.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.8e-141 505.4 309 78.6
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 8.5e-141 504.2 305 80.7
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-140 503.8 374 69.5
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-140 503.8 377 68.7
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.5e-140 503.4 382 68.3
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 3.2e-140 502.3 378 68.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 5.5e-140 501.5 383 68.1
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.2e-139 500.4 311 77.8
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.2e-139 500.4 382 67.5
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.2e-139 500.4 355 71.8
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.1e-139 499.6 380 68.2
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.6e-139 498.8 379 69.4
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 6.1e-139 498.0 305 77.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.0e-138 497.3 383 68.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.4e-138 496.9 399 65.9
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-138 496.5 383 67.1
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 3.0e-138 495.7 359 69.1
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 5.2e-138 495.0 399 65.4
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.2e-137 493.8 308 76.6
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.2e-137 493.8 379 67.8
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.2e-137 493.8 383 66.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.5e-137 493.4 305 76.1
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.0e-137 493.0 305 75.7
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.0e-137 493.0 301 78.4
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.6e-137 492.7 301 78.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.6e-137 492.7 301 78.4
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.6e-137 492.7 395 67.3
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.6e-137 492.7 305 76.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.6e-137 492.7 375 69.1
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.3e-137 492.3 375 68.0
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.3e-137 492.3 387 66.1
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.7e-137 491.5 305 76.7
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.7e-137 491.5 301 78.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 9.7e-137 490.7 379 67.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.3e-136 490.3 305 75.4
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.3e-136 490.3 305 75.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.8e-136 489.2 305 76.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 3.7e-136 488.8 384 67.2
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 6.3e-136 488.0 380 67.6
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.1e-135 487.3 305 74.8
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.1e-135 487.3 305 74.8
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.1e-135 487.3 305 74.4
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.4e-135 486.9 389 66.1
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.4e-135 486.9 305 75.4
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.8e-135 486.5 375 68.3
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.0e-134 483.0 384 68.5
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 3.5e-134 482.3 348 69.8
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 4.5e-134 481.9 321 72.6
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.7e-133 479.9 382 66.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.5e-132 476.9 290 80.0
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.7e-131 472.6 347 67.7
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.2e-130 468.4 369 65.9
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.5e-129 466.8 402 64.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 7.5e-129 464.5 382 64.4
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 6.3e-128 461.5 429 59.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-124 450.7 398 60.8
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.6e-123 446.8 334 70.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.6e-123 446.8 330 69.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.8e-122 443.4 387 63.3
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.8e-117 425.6 315 66.7
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.1e-116 424.1 296 69.9
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.6e-115 420.2 302 67.5
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.3e-112 410.6 293 67.9
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.7e-109 400.2 332 67.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.3e-101 373.2 281 66.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 2.5e-100 369.8 318 60.7
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 5.6e-92 342.0 272 68.4
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.6e-86 323.9 336 50.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.7e-85 320.5 294 54.8
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.1e-82 311.2 310 48.4
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 8.7e-77 291.6 285 57.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.6e-65 251.9 163 74.2
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.1e-63 248.1 181 72.4
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.8e-48 196.4 169 60.4
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.7e-45 185.7 128 67.2
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 7.2e-31 139.0 89 75.3
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.1e-30 137.5 102 66.7
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.6e-22 110.2 161 38.5
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.0e-21 106.7 87 62.1
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 7.5e-20 102.4 128 55.5
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.1e-18 96.7 74 64.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.9e-17 92.8 106 48.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.3e-11 75.1 44 70.5


User provided reference genes

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