Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 8.7e-194 680.2 374 100.0
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 1.7e-136 490.0 382 69.1
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 4.3e-124 448.7 374 65.8
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 1.3e-120 437.2 375 64.3
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 2.2e-120 436.4 387 65.1
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 5.6e-116 421.8 389 58.9
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 1.6e-115 420.2 382 66.0
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 2.6e-113 412.9 375 65.1
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 2.6e-113 412.9 381 59.8
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 2.4e-111 406.4 376 64.1
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 7.0e-111 404.8 379 60.7
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 1.6e-110 403.7 383 62.7
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 4.6e-110 402.1 388 57.7
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 1.0e-109 401.0 384 58.6
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 2.3e-109 399.8 395 58.2
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 3.0e-109 399.4 389 56.6
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 6.6e-109 398.3 383 62.1
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 6.6e-109 398.3 383 57.4
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 1.1e-108 397.5 383 62.1
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 1.9e-108 396.7 358 63.4
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 1.9e-108 396.7 386 61.4
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 2.5e-108 396.4 386 59.3
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 5.6e-108 395.2 400 60.0
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 7.3e-108 394.8 384 61.5
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 9.5e-108 394.4 383 61.1
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 4.7e-107 392.1 383 59.0
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 1.8e-106 390.2 390 56.7
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 3.1e-106 389.4 389 56.6
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 2.0e-105 386.7 394 55.6
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 2.0e-105 386.7 382 59.2
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 2.6e-105 386.3 394 57.1
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.7e-104 383.6 380 59.2
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.2e-104 383.3 389 55.3
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.9e-104 382.9 441 53.5
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 2.9e-104 382.9 377 59.7
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 3.7e-104 382.5 383 57.7
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 4.9e-104 382.1 390 59.5
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 6.4e-104 381.7 377 57.3
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 1.1e-103 380.9 385 57.9
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 1.4e-103 380.6 402 57.0
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 3.2e-103 379.4 346 64.5
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 1.2e-102 377.5 386 59.6
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 1.6e-102 377.1 369 59.9
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 4.6e-102 375.6 375 58.9
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 4.6e-102 375.6 377 56.8
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 6.0e-102 375.2 422 51.9
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 7.8e-102 374.8 400 53.5
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 7.8e-102 374.8 360 58.3
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 1.0e-101 374.4 389 58.1
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 1.3e-101 374.0 372 55.6
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 1.3e-101 374.0 377 58.1
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 1.3e-101 374.0 394 56.3
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 1.3e-101 374.0 353 63.5
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 3.0e-101 372.9 362 57.2
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 3.9e-101 372.5 388 58.8
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 5.1e-101 372.1 365 60.0
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 5.1e-101 372.1 392 56.6
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 8.6e-101 371.3 379 54.1
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 1.1e-100 370.9 376 57.7
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 1.1e-100 370.9 361 55.7
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 3.3e-100 369.4 361 56.8
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 3.3e-100 369.4 390 57.4
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 4.3e-100 369.0 445 51.7
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 5.6e-100 368.6 380 59.7
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 2.1e-99 366.7 374 54.8
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 4.7e-99 365.5 377 58.6
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 6.2e-99 365.2 375 55.2
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 6.2e-99 365.2 392 53.6
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.1e-98 364.4 385 54.8
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 1.8e-98 363.6 378 57.4
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 5.2e-98 362.1 343 57.7
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 5.2e-98 362.1 400 53.5
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 5.2e-98 362.1 442 50.5
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 6.8e-98 361.7 379 57.0
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 4.4e-97 359.0 390 54.6
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 9.9e-97 357.8 362 55.8
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 1.3e-96 357.5 379 58.0
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 2.2e-96 356.7 466 49.1
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 1.1e-95 354.4 382 52.6
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 1.1e-95 354.4 617 41.2
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 2.4e-95 353.2 385 51.9
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 2.1e-94 350.1 363 54.5
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 1.3e-93 347.4 365 51.2
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 3.0e-93 346.3 360 57.8
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 3.0e-93 346.3 400 51.5
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 8.7e-93 344.7 378 54.5
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 1.5e-92 344.0 375 50.4
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 1.5e-92 344.0 400 55.0
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 2.5e-92 343.2 350 53.4
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 1.2e-91 340.9 377 49.3
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 2.4e-90 336.7 379 49.3
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 9.0e-90 334.7 407 51.4
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 2.6e-89 333.2 362 53.9
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 9.9e-89 331.3 355 51.3
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 1.3e-88 330.9 371 55.5
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 6.4e-88 328.6 370 55.1
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 4.2e-87 325.9 444 45.7
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 1.7e-85 320.5 463 47.9
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 3.9e-85 319.3 336 58.3
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 5.1e-85 318.9 323 59.1
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 1.9e-84 317.0 405 45.9
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 3.5e-78 296.2 316 54.7
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 1.0e-77 294.7 368 44.6
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 1.5e-73 280.8 371 47.4
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 8.4e-64 248.4 162 72.2
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 9.4e-55 218.4 135 77.8
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 9.4e-55 218.4 141 75.9
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 1.0e-45 188.3 361 35.7
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 1.4e-45 188.0 392 35.2
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 6.7e-45 185.7 111 82.0
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 8.8e-45 185.3 338 35.8
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 1.7e-43 181.0 361 34.1
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 2.8e-43 180.3 216 48.6
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 3.8e-40 169.9 366 33.1
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 2.2e-27 127.5 279 31.5
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 2.8e-27 127.1 183 39.9
HPP92_011577 Vanilla planifolia HOM05D006549 ORTHO05D008080 1.6e-25 121.3 215 40.5
MELO3C015170.2 Cucumis melo HOM05D006549 ORTHO05D008080 2.2e-24 117.5 100 62.0
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 1.0e-21 108.6 194 32.0
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 1.2e-17 95.1 64 70.3
BolC3t13160H Brassica oleracea HOM05D006549 ORTHO05D008080 4.5e-17 93.2 76 57.9
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 7.7e-17 92.4 55 85.5
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 6.6e-16 89.4 185 34.6
Cpa.g.c41750 Carica papaya HOM05D006549 ORTHO05D008080 6.1e-14 82.8 60 68.3
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 3.0e-13 80.5 64 64.1


User provided reference genes

Program Settings