Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 1.8e-116 422.5 211 100.0
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 6.4e-77 291.2 222 70.3
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 2.1e-72 276.2 222 65.3
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 2.8e-72 275.8 219 68.9
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 3.6e-72 275.4 227 67.4
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 9.0e-71 270.8 215 67.0
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 7.6e-70 267.7 208 65.9
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 9.9e-70 267.3 214 66.8
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 9.3e-68 260.8 219 64.8
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 2.7e-67 259.2 230 61.3
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 6.0e-67 258.1 231 62.8
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 7.9e-67 257.7 230 60.9
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.3e-66 256.9 230 60.9
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 3.9e-66 255.4 230 60.4
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 3.9e-66 255.4 228 64.0
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 6.6e-66 254.6 230 60.4
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.9e-65 253.1 228 61.8
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 5.6e-65 251.5 225 61.8
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 5.6e-65 251.5 231 61.5
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 1.6e-64 250.0 227 62.1
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 1.6e-64 250.0 227 63.0
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 1.6e-64 250.0 231 59.7
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 1.6e-64 250.0 224 60.3
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 2.1e-64 249.6 225 60.9
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 2.8e-64 249.2 218 62.4
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 8.1e-64 247.7 232 59.5
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 8.1e-64 247.7 232 59.5
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 8.1e-64 247.7 225 61.3
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 1.8e-63 246.5 213 63.4
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 5.3e-63 245.0 227 59.0
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 1.2e-62 243.8 231 59.7
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.5e-62 243.4 227 57.7
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 2.0e-62 243.0 232 61.6
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 2.6e-62 242.7 232 58.6
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 4.5e-62 241.9 231 60.2
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 5.8e-62 241.5 232 60.8
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 9.9e-62 240.7 222 61.7
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 9.9e-62 240.7 231 59.3
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 9.9e-62 240.7 230 59.1
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 1.3e-61 240.4 227 61.2
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 2.2e-61 239.6 228 58.8
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 2.2e-61 239.6 224 61.2
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 2.9e-61 239.2 226 61.1
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.9e-61 239.2 218 62.8
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 3.8e-61 238.8 226 58.0
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.9e-61 238.4 224 61.2
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.9e-61 238.4 224 61.2
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 4.9e-61 238.4 230 58.3
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 6.4e-61 238.0 238 58.0
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 8.4e-61 237.7 198 66.7
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 1.9e-60 236.5 228 59.2
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 1.9e-60 236.5 221 62.4
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 4.2e-60 235.3 225 57.8
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 5.4e-60 235.0 213 59.6
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 5.4e-60 235.0 226 56.2
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 7.1e-60 234.6 222 60.8
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 1.2e-59 233.8 213 61.0
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 1.2e-59 233.8 233 58.8
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 1.6e-59 233.4 225 56.0
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 2.1e-59 233.0 233 56.7
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 2.7e-59 232.6 225 56.4
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.7e-59 232.6 224 56.2
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 4.6e-59 231.9 218 56.9
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 4.6e-59 231.9 223 57.8
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 7.9e-59 231.1 224 55.8
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 1.8e-58 229.9 228 57.0
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 1.8e-58 229.9 226 54.9
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 2.3e-58 229.6 226 55.3
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 2.3e-58 229.6 209 58.9
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 2.3e-58 229.6 229 55.9
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 3.0e-58 229.2 218 57.3
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 3.0e-58 229.2 185 63.2
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 3.9e-58 228.8 219 56.2
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 3.9e-58 228.8 215 57.2
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 5.1e-58 228.4 223 55.6
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 5.1e-58 228.4 215 56.7
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 6.7e-58 228.0 212 57.1
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 6.7e-58 228.0 211 58.8
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 8.7e-58 227.6 213 57.7
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 8.7e-58 227.6 217 57.1
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.1e-57 227.3 237 57.0
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 1.1e-57 227.3 220 56.4
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 1.9e-57 226.5 224 54.9
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 2.5e-57 226.1 176 63.6
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 4.3e-57 225.3 206 58.3
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 5.6e-57 224.9 227 55.9
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 7.4e-57 224.6 224 56.7
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 9.6e-57 224.2 215 58.1
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.3e-56 223.8 215 57.7
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 3.7e-56 222.2 211 55.9
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 4.8e-56 221.9 211 55.9
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 4.8e-56 221.9 215 57.2
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 6.2e-56 221.5 221 53.4
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 6.2e-56 221.5 211 55.9
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 6.2e-56 221.5 211 55.9
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 6.2e-56 221.5 211 55.9
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 6.2e-56 221.5 204 58.8
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 8.1e-56 221.1 211 57.8
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 8.1e-56 221.1 209 56.5
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 1.8e-55 219.9 212 54.7
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 1.8e-55 219.9 205 57.1
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 3.1e-55 219.2 207 55.1
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 3.1e-55 219.2 209 57.4
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 3.1e-55 219.2 220 53.6
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 3.1e-55 219.2 152 72.4
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 4.0e-55 218.8 226 51.8
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 5.3e-55 218.4 213 58.2
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 5.3e-55 218.4 212 58.5
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 9.0e-55 217.6 238 53.4
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 4.5e-54 215.3 216 56.9
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 5.8e-54 214.9 175 61.7
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 1.0e-53 214.2 225 50.2
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 1.3e-53 213.8 196 56.1
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 1.3e-53 213.8 212 55.7
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 1.7e-53 213.4 215 55.3
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 1.7e-53 213.4 201 55.2
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 2.2e-53 213.0 203 57.6
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 2.9e-53 212.6 225 52.4
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 4.9e-53 211.8 214 54.7
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 6.5e-53 211.5 223 52.0
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 8.4e-53 211.1 142 69.7
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 1.1e-52 210.7 203 57.6
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 1.4e-52 210.3 207 56.5
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 2.5e-52 209.5 223 51.1
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 2.5e-52 209.5 178 62.4
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 2.5e-52 209.5 178 62.4
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 3.2e-52 209.1 215 55.3
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 3.5e-51 205.7 218 56.4
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 4.6e-51 205.3 229 49.8
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 4.6e-51 205.3 210 53.3
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 6.0e-51 204.9 227 55.5
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.5e-49 200.3 248 50.4
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 1.9e-49 199.9 168 58.3
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 3.3e-49 199.1 139 65.5
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 9.6e-49 197.6 142 65.5
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 1.3e-48 197.2 242 50.4
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 1.8e-47 193.4 138 65.9
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 5.3e-47 191.8 213 52.1
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 9.0e-47 191.0 177 57.6
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 1.2e-46 190.7 163 57.1
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.0e-46 189.9 203 48.8
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 7.6e-46 188.0 210 52.4
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 2.2e-45 186.4 132 64.4
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 3.8e-45 185.7 180 54.4
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 5.0e-45 185.3 186 56.5
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 1.6e-43 180.3 172 56.4
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 1.0e-42 177.6 219 47.5
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 1.3e-42 177.2 216 48.6
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 2.3e-42 176.4 192 55.2
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 2.3e-42 176.4 214 47.7
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.3e-40 170.6 214 46.7
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 3.7e-40 169.1 216 46.3
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 4.8e-40 168.7 220 46.4
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 6.3e-40 168.3 210 48.1
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 6.3e-40 168.3 222 47.7
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 6.3e-40 168.3 126 63.5
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 1.4e-39 167.2 122 66.4
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.8e-39 166.8 217 46.5
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 1.5e-38 163.7 210 47.1
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 7.7e-38 161.4 122 62.3
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 5.0e-37 158.7 126 58.7
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 1.9e-36 156.8 137 54.7
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 9.4e-36 154.5 128 57.8
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 4.6e-35 152.1 219 44.7
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 1.8e-34 150.2 112 59.8
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 1.5e-33 147.1 192 45.8
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 5.7e-33 145.2 130 52.3
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 1.7e-32 143.7 153 54.9
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 5.3e-31 138.7 202 45.0
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.2e-29 133.3 265 35.8
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 8.5e-29 131.3 82 75.6
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 1.1e-28 131.0 218 42.7
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 1.1e-28 131.0 218 42.7
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 3.6e-27 125.9 88 68.2
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 1.4e-26 124.0 212 41.0
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 1.5e-20 104.0 76 67.1
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 9.7e-17 91.3 54 75.9
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 2.4e-15 86.7 52 73.1
CSS0045152 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 3.6e-11 72.8 114 46.5
SGA_v2.0_scaffold141G35518 Striga asiatica HOM05D000145 ORTHO05D399266 5.9e-06 55.5 87 43.7


User provided reference genes

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