Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.3e-87 325.1 173 100.0
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 1.8e-40 169.9 162 61.7
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 6.5e-35 151.4 138 63.8
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 1.1e-31 140.6 156 53.8
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 5.7e-31 138.3 148 58.1
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 1.1e-29 134.0 151 51.0
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 4.1e-29 132.1 131 61.8
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 2.0e-28 129.8 140 52.9
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 5.9e-28 128.3 123 58.5
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 5.9e-28 128.3 124 55.6
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 7.7e-28 127.9 171 49.1
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.7e-27 126.7 156 49.4
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.7e-27 126.7 144 54.2
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 3.8e-27 125.6 139 52.5
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 6.5e-27 124.8 160 51.2
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.1e-26 124.0 87 70.1
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.5e-26 123.6 116 58.6
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 1.5e-26 123.6 105 62.9
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.5e-26 123.6 113 61.9
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.9e-26 123.2 149 50.3
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.9e-26 123.2 99 63.6
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 3.2e-26 122.5 107 60.7
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.2e-26 122.5 87 71.3
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.2e-26 122.5 87 71.3
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 4.2e-26 122.1 170 46.5
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 5.5e-26 121.7 150 49.3
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 1.2e-25 120.6 90 66.7
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 1.6e-25 120.2 84 69.0
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.7e-25 119.4 141 51.1
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 2.7e-25 119.4 115 55.7
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 3.6e-25 119.0 102 61.8
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 3.6e-25 119.0 92 64.1
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 4.7e-25 118.6 173 46.2
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 6.1e-25 118.2 120 55.0
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 6.1e-25 118.2 133 52.6
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 8.0e-25 117.9 99 65.7
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 8.0e-25 117.9 141 50.4
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 8.0e-25 117.9 106 60.4
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.0e-24 117.5 162 47.5
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.0e-24 117.5 155 48.4
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.0e-24 117.5 78 76.9
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.4e-24 117.1 108 56.5
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.8e-24 116.7 163 46.0
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.8e-24 116.7 130 53.8
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.8e-24 116.7 162 46.9
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 2.3e-24 116.3 156 46.8
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 2.3e-24 116.3 117 52.1
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 2.3e-24 116.3 107 54.2
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 2.3e-24 116.3 166 44.0
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 3.0e-24 115.9 91 68.1
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 3.0e-24 115.9 96 59.4
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 5.2e-24 115.2 148 48.0
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 6.7e-24 114.8 91 65.9
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 6.7e-24 114.8 92 65.2
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 8.8e-24 114.4 186 44.1
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 8.8e-24 114.4 83 71.1
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 1.1e-23 114.0 114 53.5
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.5e-23 113.6 176 44.3
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 1.5e-23 113.6 91 65.9
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.5e-23 113.6 91 65.9
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.5e-23 113.6 95 61.1
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.0e-23 113.2 112 54.5
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 2.6e-23 112.8 100 59.0
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.6e-23 112.8 161 44.7
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 2.6e-23 112.8 155 45.8
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 3.3e-23 112.5 93 63.4
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 3.3e-23 112.5 94 61.7
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.3e-23 112.5 163 44.2
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 5.7e-23 111.7 92 59.8
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 9.7e-23 110.9 103 59.2
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.7e-23 110.9 86 66.3
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.3e-22 110.5 121 54.5
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.3e-22 110.5 133 51.9
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 2.8e-22 109.4 91 63.7
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 8.2e-22 107.8 164 45.7
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 1.1e-21 107.5 130 53.1
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 1.8e-21 106.7 90 63.3
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 1.8e-21 106.7 85 64.7
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.8e-21 106.7 134 46.3
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.4e-21 106.3 94 57.4
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 2.4e-21 106.3 76 72.4
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 5.3e-21 105.1 113 53.1
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 5.3e-21 105.1 116 51.7
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 9.1e-21 104.4 145 44.1
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.6e-20 103.6 97 56.7
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 2.0e-20 103.2 130 48.5
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.6e-20 102.8 129 47.3
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 3.5e-20 102.4 89 59.6
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 3.5e-20 102.4 86 65.1
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 3.5e-20 102.4 97 55.7
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 4.5e-20 102.1 89 57.3
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 5.9e-20 101.7 99 54.5
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 7.7e-20 101.3 76 69.7
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 7.7e-20 101.3 113 51.3
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.0e-19 100.9 76 69.7
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.0e-19 100.9 76 69.7
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 1.7e-19 100.1 138 45.7
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 1.7e-19 100.1 86 59.3
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 2.2e-19 99.8 134 47.8
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 2.9e-19 99.4 141 46.8
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.9e-19 99.4 75 68.0
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 3.8e-19 99.0 141 46.8
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 4.2e-18 95.5 153 41.2
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 4.2e-18 95.5 93 60.2
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 2.1e-17 93.2 81 59.3
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 2.1e-17 93.2 92 53.3
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 8.0e-17 91.3 76 64.5
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 1.0e-16 90.9 74 60.8
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 2.3e-16 89.7 152 42.8
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 8.8e-16 87.8 117 47.9
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 7.5e-15 84.7 66 69.7
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 3.7e-14 82.4 133 45.9
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 6.3e-14 81.6 100 49.0
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.4e-13 80.5 84 53.6
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 7.0e-13 78.2 100 49.0
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 7.0e-13 78.2 72 55.6
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 3.5e-12 75.9 89 50.6
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 4.5e-12 75.5 55 67.3
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 7.7e-12 74.7 107 45.8
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 1.3e-11 73.9 97 45.4
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 2.9e-11 72.8 99 45.5
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 1.5e-10 70.5 97 46.4
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.2e-10 68.9 57 63.2
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.2e-10 68.9 57 63.2
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-10 68.6 55 65.5
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-10 68.6 55 65.5
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 2.7e-09 66.2 70 48.6
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 4.7e-09 65.5 64 54.7


User provided reference genes

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