Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02154 Erythranthe guttata HOM05D002394 ORTHO05D190670 5.0e-35 150.6 78 100.0
Nn1g02149 Nelumbo nucifera HOM05D002394 ORTHO05D002508 3.6e-09 64.7 69 59.4
HanXRQChr10g0282891 Helianthus annuus HOM05D002394 ORTHO05D002508 3.1e-08 61.6 70 44.3
MSTRG.17434 Avicennia marina HOM05D002394 ORTHO05D002508 8.9e-08 60.1 32 71.9
Gohir.D08G203400 Gossypium hirsutum HOM05D002394 ORTHO05D002508 8.9e-08 60.1 50 54.0
Gorai.004G215400 Gossypium raimondii HOM05D002394 ORTHO05D002508 8.9e-08 60.1 50 54.0
Lsat_1_v5_gn_9_4400 Lactuca sativa HOM05D002394 ORTHO05D002508 1.5e-07 59.3 50 50.0
Oeu014750.1 Olea europaea HOM05D002394 ORTHO05D002508 1.5e-07 59.3 45 57.8
Oeu014752.1 Olea europaea HOM05D002394 ORTHO05D002508 1.5e-07 59.3 45 57.8
Aa31LG10G16890 Aethionema arabicum HOM05D002394 ORTHO05D002508 2.6e-07 58.5 45 53.3
Migut.D00265 Erythranthe guttata HOM05D002394 ORTHO05D002508 2.6e-07 58.5 49 51.0
Duzib138G0181 Durio zibethinus HOM05D002394 ORTHO05D002508 3.4e-07 58.2 32 68.8
CANSAT25G2185 Cannabis sativa HOM05D002394 ORTHO05D002508 4.4e-07 57.8 32 65.6
Gohir.A08G185300 Gossypium hirsutum HOM05D002394 ORTHO05D002508 4.4e-07 57.8 32 68.8
Gohir.D12G005600 Gossypium hirsutum HOM05D002394 ORTHO05D002508 4.4e-07 57.8 45 55.6
Gorai.008G005400 Gossypium raimondii HOM05D002394 ORTHO05D002508 4.4e-07 57.8 45 55.6
TWI59G0819 Tripterygium wilfordii HOM05D002394 ORTHO05D002508 4.4e-07 57.8 32 68.8
vmacro02550 Vaccinium macrocarpon HOM05D002394 ORTHO05D002508 4.4e-07 57.8 32 65.6
Carub.0005s2971 Capsella rubella HOM05D002394 ORTHO05D002508 5.8e-07 57.4 32 65.6
COL.COLO4_09138 Corchorus olitorius HOM05D002394 ORTHO05D002508 5.8e-07 57.4 32 68.8
Hma1.2p1_0257F.1_g103760 Hydrangea macrophylla HOM05D002394 ORTHO05D002508 5.8e-07 57.4 32 68.8
Thecc.01G283500 Theobroma cacao HOM05D002394 ORTHO05D002508 5.8e-07 57.4 32 68.8
CiPaw.07G094400 Carya illinoinensis HOM05D002394 ORTHO05D002508 7.5e-07 57.0 67 49.3
Gohir.A12G006100 Gossypium hirsutum HOM05D002394 ORTHO05D002508 7.5e-07 57.0 71 40.8
CiPaw.08G103300 Carya illinoinensis HOM05D002394 ORTHO05D002508 9.8e-07 56.6 32 65.6
GSVIVG01011098001 Vitis vinifera HOM05D002394 ORTHO05D002508 9.8e-07 56.6 32 65.6
AL5G45880 Arabidopsis lyrata HOM05D002394 ORTHO05D002508 1.3e-06 56.2 32 65.6
AT3G63060 Arabidopsis thaliana HOM05D002394 ORTHO05D002508 1.3e-06 56.2 32 65.6
MSTRG.18217 Avicennia marina HOM05D002394 ORTHO05D002508 1.3e-06 56.2 32 62.5
CAN.G1297.7 Capsicum annuum HOM05D002394 ORTHO05D002508 1.3e-06 56.2 49 49.0
BcaB02g09443 Brassica carinata HOM05D002394 ORTHO05D002508 1.7e-06 55.8 45 53.3
BcaB06g28838 Brassica carinata HOM05D002394 ORTHO05D002508 1.7e-06 55.8 42 52.4
C04p12860 Brassica napus HOM05D002394 ORTHO05D002508 1.7e-06 55.8 45 53.3
BolC4t22930H Brassica oleracea HOM05D002394 ORTHO05D002508 1.7e-06 55.8 45 53.3
BraA05t19983Z Brassica rapa HOM05D002394 ORTHO05D002508 1.7e-06 55.8 45 53.3
Ciclev10020962m.g Citrus clementina HOM05D002394 ORTHO05D002508 1.7e-06 55.8 32 62.5
MD03G1268700 Malus domestica HOM05D002394 ORTHO05D002508 1.7e-06 55.8 72 40.3
TAR362G0402 Trochodendron aralioides HOM05D002394 ORTHO05D002508 1.7e-06 55.8 54 48.1
PSO407G0148 Papaver somniferum HOM05D002394 ORTHO05D002508 2.2e-06 55.5 32 68.8
Prupe.8G244600 Prunus persica HOM05D002394 ORTHO05D002508 2.2e-06 55.5 74 39.2
PGR119G0593 Punica granatum HOM05D002394 ORTHO05D002508 2.2e-06 55.5 29 72.4
Solyc06g084320.1 Solanum lycopersicum HOM05D002394 ORTHO05D002508 2.2e-06 55.5 32 65.6
Sopen06g035710 Solanum pennellii HOM05D002394 ORTHO05D002508 2.2e-06 55.5 32 65.6
BcaC02g11635 Brassica carinata HOM05D002394 ORTHO05D002508 2.9e-06 55.1 32 62.5
ECA247G2495 Erigeron canadensis HOM05D002394 ORTHO05D002508 2.9e-06 55.1 29 72.4
FAN24G0944 Fragaria x ananassa HOM05D002394 ORTHO05D002508 2.9e-06 55.1 49 49.0
Manes.05G073600 Manihot esculenta HOM05D002394 ORTHO05D002508 2.9e-06 55.1 32 65.6
Sp4g17560 Schrenkiella parvula HOM05D002394 ORTHO05D002508 2.9e-06 55.1 32 62.5
A05p10460 Brassica napus HOM05D002394 ORTHO05D002508 3.7e-06 54.7 45 51.1
Eucgr.H01519 Eucalyptus grandis HOM05D002394 ORTHO05D002508 3.7e-06 54.7 29 72.4
SalBow4G3315 Salvia bowleyana HOM05D002394 ORTHO05D002508 3.7e-06 54.7 29 75.9
Sc24g0004130 Simmondsia chinensis HOM05D002394 ORTHO05D002508 3.7e-06 54.7 31 64.5
EL10Ac5g11291 Beta vulgaris HOM05D002394 ORTHO05D002508 4.9e-06 54.3 62 38.7
ClCG07G000060 Citrullus lanatus HOM05D002394 ORTHO05D002508 4.9e-06 54.3 32 59.4
FvH4_2g23930 Fragaria vesca HOM05D002394 ORTHO05D002508 4.9e-06 54.3 32 62.5
FAN27G0839 Fragaria x ananassa HOM05D002394 ORTHO05D002508 4.9e-06 54.3 32 62.5
Oeu011167.1 Olea europaea HOM05D002394 ORTHO05D002508 4.9e-06 54.3 32 59.4
Ah.11g046850 Amaranthus hybridus HOM05D002394 ORTHO05D002508 6.4e-06 53.9 32 59.4
CSS0035121 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 6.4e-06 53.9 29 69.0
Cpa.g.sc485.1 Carica papaya HOM05D002394 ORTHO05D002508 6.4e-06 53.9 32 59.4
Dinv32960 Davidia involucrata HOM05D002394 ORTHO05D002508 6.4e-06 53.9 54 48.1
Nitab4.5_0000759g0040 Nicotiana tabacum HOM05D002394 ORTHO05D002508 6.4e-06 53.9 29 69.0
Nitab4.5_0007767g0010 Nicotiana tabacum HOM05D002394 ORTHO05D002508 6.4e-06 53.9 29 69.0
Peaxi162Scf00783g00313 Petunia axillaris HOM05D002394 ORTHO05D002508 6.4e-06 53.9 29 69.0
Atru.chr5.1364 Acer truncatum HOM05D002394 ORTHO05D002508 8.3e-06 53.5 32 59.4
CAN.G1682.17 Capsicum annuum HOM05D002394 ORTHO05D002508 8.3e-06 53.5 32 62.5
MBI19_g03949_MAGBIO Magnolia biondii HOM05D002394 ORTHO05D002508 8.3e-06 53.5 49 53.1
Nitab4.5_0006180g0020 Nicotiana tabacum HOM05D002394 ORTHO05D002508 8.3e-06 53.5 50 46.0
QL12p022505 Quercus lobata HOM05D002394 ORTHO05D002508 8.3e-06 53.5 29 69.0
Rhsim13G0022500 Rhododendron simsii HOM05D002394 ORTHO05D002508 8.3e-06 53.5 66 43.9
SGA_v2.0_scaffold1G00450 Striga asiatica HOM05D002394 ORTHO05D002508 8.3e-06 53.5 31 64.5
THA.LOC104823055 Tarenaya hassleriana HOM05D002394 ORTHO05D002508 8.3e-06 53.5 32 59.4


User provided reference genes

Program Settings